mRNA_E-fasciculatus_F_contig13632.2693.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13632.2693.1
Unique NamemRNA_E-fasciculatus_F_contig13632.2693.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13632.2693.1 vs. uniprot
Match: A0A6H5JPD9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPD9_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 2.010e-120
Identity = 185/192 (96.35%), Postives = 189/192 (98.44%), Query Frame = 1
Query:    4 MHIADDGVRGMSASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVDHRRKWKWWALLSVVRMVVITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQGCENPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKLPV 579
            MHIADDGVRG+SASRL LLLLTLVNLPLIAAGVVIL LHWQDTDVCDVDHRRKWKWWALLSVVRM++ITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQGC+NPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQR KGARQDEIEKLPV
Sbjct:  158 MHIADDGVRGLSASRLSLLLLTLVNLPLIAAGVVILILHWQDTDVCDVDHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQGCDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRLKGARQDEIEKLPV 349          
BLAST of mRNA_E-fasciculatus_F_contig13632.2693.1 vs. uniprot
Match: D7FY42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY42_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 1.130e-80
Identity = 117/121 (96.69%), Postives = 121/121 (100.00%), Query Frame = 1
Query:    4 MHIADDGVRGMSASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVDHRRKWKWWALLSVVRMVVITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQG 366
            MHIADDGVRGM+ASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDV+HRRKWKWWALLSVVRM++ITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQG
Sbjct:    1 MHIADDGVRGMNASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQG 121          
BLAST of mRNA_E-fasciculatus_F_contig13632.2693.1 vs. uniprot
Match: A0A7S3XQH4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQH4_HETAK)

HSP 1 Score: 164 bits (414), Expect = 8.280e-47
Identity = 86/194 (44.33%), Postives = 127/194 (65.46%), Query Frame = 1
Query:    1 RMHIADDGVRGMSASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVDHRRKWKWWALLSVVRMVVITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLL-QNQGCENPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKLPV 579
            RM++  +G+R ++  RL + L  +VNLP + A  V+L+LHW D  VCD DHR +WKWWA ++  R+ V T +++  + V  +R  D  + I  + SN RN +D +GL+WFV+G+MWL  Q + C+    SP+YQLC+  +++TY+HICLPC++       XXXXXXXX R++  LQ P R KGA Q  I+KL +
Sbjct:   15 RMNVLQNGIREVNNRRLVVFLTLVVNLPQLVAAAVVLSLHWDDDAVCDADHRERWKWWAAVAAARLAVYTGLLVALYLVLLRRPRDAREVI--VLSNARNGVDALGLIWFVVGNMWLFGQTESCDGAGASPVYQLCVAMLLVTYLHICLPCLIXXXXXXXXXXXXXXXXRVLARLQDPMRGKGANQAAIDKLKI 206          
BLAST of mRNA_E-fasciculatus_F_contig13632.2693.1 vs. uniprot
Match: A0A7S2V5V5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5V5_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.070e-46
Identity = 89/192 (46.35%), Postives = 129/192 (67.19%), Query Frame = 1
Query:    1 RMHIADDGVRGMSASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVDHRRKWKWWALLSVVRMVVITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLL-QNQGCENPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKL 573
            RM++    +R ++  +L +L+  LVN+P I A + +L+LHW DT  CD + R++W+WWAL+S VRM + T V++V +     R  D  +    L SN+RN +D +GL+WFV+G+MWL  Q++ C+NP  SPIYQLC+  ++ITYIHICLPC++       XXXXXXXX R++  LQ P R KGA Q  I++L
Sbjct:   82 RMNVLGTSMREVNNRKLVVLVTLLVNIPQIVAAIAVLSLHWGDTFACDPERRQRWRWWALISTVRMAIYTVVMVVLYFFTLHRPRDSREVA--LLSNLRNGVDALGLIWFVVGNMWLFGQSESCDNPGSSPIYQLCVAMLLITYIHICLPCLIXXXXXXXXXXXXXXXXRVLSRLQDPMRGKGANQAAIDRL 271          
BLAST of mRNA_E-fasciculatus_F_contig13632.2693.1 vs. uniprot
Match: A0A7S2DZB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DZB6_9STRA)

HSP 1 Score: 158 bits (399), Expect = 8.200e-44
Identity = 83/200 (41.50%), Postives = 125/200 (62.50%), Query Frame = 1
Query:    1 RMHIADDGVRGMSASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVDHRRKWKWWALLSVVRMVVITPVVMVRWRVEGQ-REEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQG------CENPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKLPV 579
            R+++ +D +R +S+SR+ +  L L N P I A +V+L+LHW D  VCD +HR KW+ WAL++ +RMV+    + +   V     ++DR   +  +  N+RN LD  GLVWF++G+MWL           C  P  SPIY LCL  ++  YIHICLPCI+ +L++PV   XXXXXI ++  ++ P+  KGA +  I+KLP+
Sbjct:   63 RVNVLNDSLREVSSSRIAVSALILFNFPQIVAAIVVLSLHWPDDSVCDAEHRLKWRVWALIATIRMVLHMVTIFLIIGVSRMVTQQDRQTRLLMILHNLRNLLDAAGLVWFLVGNMWLFGGSDEKVTTVCVRPTQSPIYNLCLAMVVFNYIHICLPCIVAILMIPVLCFXXXXXIHMLRWMRDPEEGKGASEAAIKKLPL 262          
BLAST of mRNA_E-fasciculatus_F_contig13632.2693.1 vs. uniprot
Match: K8YR69_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YR69_NANGC)

HSP 1 Score: 129 bits (323), Expect = 3.900e-32
Identity = 72/191 (37.70%), Postives = 113/191 (59.16%), Query Frame = 1
Query:   13 ADDGVRGMSASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVDHRRKWKWWALLSVVRMVVITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQN--QGCENPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKLPV 579
            A   VR + ++   L ++ +VN+P I A VVIL+ +W DT  C+     KWK +AL++ +RM +    V   +R+ G+        +    S+ RN LD  GL+WFV+G+MWL     + C +P  SP+Y LC+ ++ I Y  +CLPC+++++++PV   XXXX IR++  +Q P R KGA    I KLP+
Sbjct:   17 ALHNVREVRSASFALCVVLVVNIPQIIAAVVILSKYWHDT-TCEPSETTKWKTYALIAALRMFLYVSSVSALYRLNGRMPATTR--LMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEICPHPNRSPVYSLCVAFVFINYAQLCLPCVVVIIMLPVLCFXXXXLIRILARIQDPMRGKGATPSMINKLPM 204          
BLAST of mRNA_E-fasciculatus_F_contig13632.2693.1 vs. uniprot
Match: A0A4D9DBP5_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBP5_9STRA)

HSP 1 Score: 125 bits (315), Expect = 8.640e-31
Identity = 68/171 (39.77%), Postives = 103/171 (60.23%), Query Frame = 1
Query:   73 VNLPLIAAGVVILTLHWQDTDVCDVDHRRKWKWWALLSVVRMVVITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQN--QGCENPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKLPV 579
            VN+P I A VVIL+ +W DT  C+     KWK +AL++ +RM +    V   +R+ G+        +    S+ RN LD  GL+WFV+G+MWL     + C +P  SP+Y LC+ ++ I Y  +CLPC+++++++PV   XXXX IR++  +Q P R KGA    I KLP+
Sbjct:   76 VNIPQIIAAVVILSKYWHDT-TCEPSETTKWKTYALIAALRMFLYVSSVSALYRLNGRMPATTR--LMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEICPHPNRSPVYSLCVAFVFINYAQLCLPCVVVIIMLPVLCFXXXXLIRILARIQDPMRGKGATPSMINKLPM 243          
BLAST of mRNA_E-fasciculatus_F_contig13632.2693.1 vs. uniprot
Match: A0A7S1U290_9STRA (Hypothetical protein n=5 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U290_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.100e-29
Identity = 70/210 (33.33%), Postives = 120/210 (57.14%), Query Frame = 1
Query:    1 RMHIADDGVRGMSASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVDHRRKWKWWALLSVVRMVVITPVV-MVRWRVEGQREEDRNQAI------------DHLSSNMRNSLDIVGLVWFVIGHMWLLQNQGCENPRD-SPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQ---RRKGARQDEIEKLPV 579
            R++ A++G R + +SR  LL+   V +P IAAG+ +L  +W D + CD++H  KW+WWAL+SVVRM     V+ M    V+ +R   R   +            D L+   ++ +D++GLVWF+IG++W+L +      +  S ++ LC+ +I++ YI ICLPC + +  +PV        +R M  +Q  +    R+GA +D I+++P+
Sbjct:   30 RLNAAEEGWRRILSSRTLLLITMGVYVPQIAAGIGVLATNWNDPNACDLEHLLKWRWWALVSVVRMAAFLLVMTMDHVLVDEERSPLREFVLRTGGEEQLILWHDKLARG-KHLVDVLGLVWFIIGNLWVLSDDDSSPGQGKSALFILCVFFIVVYYIQICLPCAVAVAAIPVLCFCLPCLLRFMVRMQDAEAHAERRGAEEDVIDRIPI 238          
BLAST of mRNA_E-fasciculatus_F_contig13632.2693.1 vs. uniprot
Match: A0A7S2SC38_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SC38_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.010e-23
Identity = 72/204 (35.29%), Postives = 112/204 (54.90%), Query Frame = 1
Query:   10 IADDGVRGMSASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVDHRRKWKWWALLSVVRM----------VVITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQG----CENPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKLPV 579
            +  + VR  ++S   + +L  + +P + AG ++L L+W + DVCD  H+ KWK WA++++ RM          V +TP+             D    +    +  +N +D VGL+WF++G+MWL  + G    C +P  SPIY L L  +II Y+HICLPC++ +L    XXXXXXXX+ ++  L+      GA    IEKLP+
Sbjct:   62 VRSNLVREFTSSWSAVAMLAFLYVPQVIAGNIVLCLYWTNPDVCDRVHQLKWKIWAIVAMARMMFHLMTVTLIVALTPIA------------DPASRVMRYLNTAKNFVDGVGLLWFLLGNMWLFGDDGSSGTCHHPTQSPIYVLSLSMLIINYLHICLPCVVAILXXXXXXXXXXXXLNVLRYLRVADE-AGATAQAIEKLPL 252          
BLAST of mRNA_E-fasciculatus_F_contig13632.2693.1 vs. uniprot
Match: A0A7S3LZ97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZ97_9STRA)

HSP 1 Score: 100 bits (249), Expect = 4.900e-23
Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 1
Query:   28 RGMSASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVDHRRKWKWWALLSVVRMVVITPVVMVRWRVEGQREEDRNQAIDHLSS-----NMRNSLDIVGLVWFVIGHMWLLQNQG--CENPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPV 477
            R  +A+R  + LL ++  P + A  ++L +HW D DVCD  H R+WK W+  +  RM     +           E  R+  I+H+ +     NMRN L+  G +WF++G+MWL  +    C +   SPIY L L  II+ Y+ +C PCI+ +LL+PV
Sbjct:   50 RNDAAARGSVYLLFVIYGPQVLASFIVLGMHWNDPDVCDATHTRRWKLWSFFAACRMFAFIGLGCYV-------ERYRSWLIEHVEASNRVRNMRNLLEGCGFLWFIVGNMWLFGDDDHICHHAGRSPIYNLSLSLIILQYVQMCFPCIVAILLLPV 199          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13632.2693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5JPD9_9PHAE2.010e-12096.35RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FY42_ECTSI1.130e-8096.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XQH4_HETAK8.280e-4744.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V5V5_9STRA1.070e-4646.35Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2DZB6_9STRA8.200e-4441.50Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
K8YR69_NANGC3.900e-3237.70Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9DBP5_9STRA8.640e-3139.77RING-type domain-containing protein n=1 Tax=Nannoc... [more]
A0A7S1U290_9STRA2.100e-2933.33Hypothetical protein n=5 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SC38_9STRA2.010e-2335.29Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3LZ97_9STRA4.900e-2335.67Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13632contigE-fasciculatus_F_contig13632:73..2653 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score112.8
Seed ortholog evalue1.7e-22
Seed eggNOG ortholog44056.XP_009034871.1
KEGG koko:K13148,ko:K19041
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0010498,GO:0016020,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019941,GO:0022414,GO:0030163,GO:0031090,GO:0032182,GO:0032183,GO:0032184,GO:0032446,GO:0032501,GO:0032502,GO:0036211,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0051603,GO:0061458,GO:0061630,GO:0061659,GO:0070647,GO:0071704,GO:0098588,GO:0098805,GO:0140096,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsKOG0800@1,KOG0800@2759
EC2.3.2.27
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03041,ko04121
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-27_007010.1
Exons4
Model size579
Cds size576
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13632.2693.1prot_E-fasciculatus_F_contig13632.2693.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13632 73..2650 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927859.8366628-CDS-E-fasciculatus_F_contig13632:72..2521622927859.8366628-CDS-E-fasciculatus_F_contig13632:72..252Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13632 73..252 -
1695995726.8789089-CDS-E-fasciculatus_F_contig13632:72..2521695995726.8789089-CDS-E-fasciculatus_F_contig13632:72..252Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13632 73..252 -
1622927859.8510222-CDS-E-fasciculatus_F_contig13632:987..10211622927859.8510222-CDS-E-fasciculatus_F_contig13632:987..1021Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13632 988..1021 -
1695995726.8956761-CDS-E-fasciculatus_F_contig13632:987..10211695995726.8956761-CDS-E-fasciculatus_F_contig13632:987..1021Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13632 988..1021 -
1622927859.8666606-CDS-E-fasciculatus_F_contig13632:1885..20281622927859.8666606-CDS-E-fasciculatus_F_contig13632:1885..2028Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13632 1886..2028 -
1695995726.905482-CDS-E-fasciculatus_F_contig13632:1885..20281695995726.905482-CDS-E-fasciculatus_F_contig13632:1885..2028Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13632 1886..2028 -
1622927859.8812087-CDS-E-fasciculatus_F_contig13632:2431..26501622927859.8812087-CDS-E-fasciculatus_F_contig13632:2431..2650Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13632 2432..2650 -
1695995726.9150364-CDS-E-fasciculatus_F_contig13632:2431..26501695995726.9150364-CDS-E-fasciculatus_F_contig13632:2431..2650Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13632 2432..2650 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927859.8915153-UTR-E-fasciculatus_F_contig13632:2650..26531622927859.8915153-UTR-E-fasciculatus_F_contig13632:2650..2653Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13632 2651..2653 -
1695995726.9253895-UTR-E-fasciculatus_F_contig13632:2650..26531695995726.9253895-UTR-E-fasciculatus_F_contig13632:2650..2653Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13632 2651..2653 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13632.2693.1

>prot_E-fasciculatus_F_contig13632.2693.1 ID=prot_E-fasciculatus_F_contig13632.2693.1|Name=mRNA_E-fasciculatus_F_contig13632.2693.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=192bp
MHIADDGVRGMSASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVDH
RRKWKWWALLSVVRMVVITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNS
LDIVGLVWFVIGHMWLLQNQGCENPRDSPIYQLCLVYIIITYIHICLPCI
LLMLLVPVLCFCLPCVIRLMGMLQGPQRRKGARQDEIEKLPV
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mRNA from alignment at E-fasciculatus_F_contig13632:73..2653-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13632.2693.1 ID=mRNA_E-fasciculatus_F_contig13632.2693.1|Name=mRNA_E-fasciculatus_F_contig13632.2693.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2581bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13632:73..2653- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGATGCACATAGCCGACGATGGCGTGCGCGGCATGAGCGCCAGCAGGCT TGGCCTCCTCCTGCTCACCCTCGTGAACCTCCCGCTGATTGCGGCTGGTG TGGTTATCCTAACCCTCCACTGGCAAGACACGGACGTCTGCGATGTGGAC CACCGGCGGAAGTGGAAGTGGTGGGCGCTGCTGTCGGTTGTGAGGATGGT GGTCATTACTCCGGTGGTCATGGTGAGTCCCCTATTAATTGTTGTGCCCA TCAGTGTATGCCGGATAGTAGAGCGGAATTACCAGCATCGGTGGCTTGCC TAGTGCGTGCAAGATAGCTAGCTTGACGAATGTGTAGGCGTGCTGGTTCG GGCATCTGAGACCCACAGGTCATGTTTCAAGGCTGCTGCGTGTAAATGGT ATCTCATCGTAAAGTCTTGTGAGCTGTATATCGGTCGTGAGAGTGAGAGT GCTCCCGGGCTACCACATCAAAAAATTAAAATAAAGCATCATACGCCTGT TTTTTTATTTTTTTGTTGAAAAATTGCAAAAGTGACACAATAGAAAATCA AGTTGCACTTTCCCTGCTGCTCCTCCTGTTTGCTACGTGTCGTGTGTCTT GTGGTTCCCTCGATACGATACGAAGGTGAGATGGAGGGTGGAGGGTCAGA GGGAGGAAGACCGGAACCAGGCGATCGATCACCTGTCTAGCAACATGCGG AATTCTCTGGATATTGTCGGGCTCGTGTGGTTCGTGATCGGACACATGTG GTTGCTACAAAACCAAGGGTAAGAGCACATACCGTCAACATGCAATGCCC TCTATGCAACGGGGATAGGTTAATGGATAGAGTCCTCCGAAGCTGGCGTT TCAAAGAGTTTATCGGATCTCATACCGCGAGTATTGCTGTACGGCATACC CCATGTTTGACTTGACTTTGGTGTAGGGGGTAGCAGTTTACGACGGCGAT GAGGCGCGCAGCTTTTGCAGGTTTCCCAGTATTTCTCCACCCGGATGGGA AAACCAAAGCAAATCAGCGCTAATCAGGCATGGAGAGGACAATTCTGCGA GCGAACCTGTGGTGTACAGCGGCATCGACATCCGATGTTGCGGAAGCCAG GGGTATTCAGTGTTCCGTCGCACATCATGCCGCTGTACACCACATATTCG TTCGCAGGATTTTTCGATGTTTATATACCTACTTAGCGCAGATTTGTTTG GTTTTCCCGACATACGCTGATGCACTTATTTGCGCCGTTATACCGGTTTG TGCAATGTAACGTATGCATCCCCATACAACAGGTTTTGTTTCGATTGTGG TGGTTTAGTTGCGACATCCCTTGCCAAGGGCAACTGATTTCCACGAATAT ACACTGAAAAGGGTACAGTAGTACTCTACATTCACTGAAACACGTGTAGT ACATGTATCACAATGACAAATGAGGTGGACTGTCGCAAAAAATAGGCGTA GGACGAAAACACACACACAAAACTAAAAAAAAAAAAAGCACACTCAAGGG CGGATGCTGGAACTAACCAACTAACCAACTAACCACTTGGGTGTTGCTGC CGTCCTCCTCCCCTCTGCGCTTGTCCGTGTCTCGTGGTTGCCCGCGCTGG TGGTGGTGGTGGTGGTGGTGGTGCGCGCACAGGTGTGAAAACCCGAGGGA CTCGCCGATCTACCAGGTACGTAACTTACTTGCTGATCTTCTTCTTTCGA TACGATAGCTTCAGAGGGGGACATATCATAGAAATAGTTGAGGGAGGGAG GGATATTGTATAAATTCCGTCTGCTTTCGTCTAGTCTACCATGTTTTTTT CCAGTGGTGCAGAGTTGTTGCCTCGTACCGAGGCGTGTAGCCTACCTTAT ATGCATACGATGCAACAATACAAATCACACCCCCGTGGTGACTGACATCT TCTTTTCTAAAACACATGACGGGGTCTGATATTATGGTGGTGGGTGCGGA TGGATATGTTCTGTCGTTTACGGCGCATGAAGCCGTCATGTTATGTCATG TCGACGTCGTGCTTGCAGTTAGTTGTGCACCTGGTGCGGCTGTTTTGGCC AGATCGCTTTCGTGTTGCTATTGGTGTTTTTCCTATTCATATTCGTTACA ATTCCAACCGGGTACGGGCTTTCGTCGTAGAAGCATCACTCATCGTGTCG AGCAAGAAATAAGTGCTTCTTTTTGTTGTCGACGCCACCCGCCAACAAGG GAAGGAGAACATGAACACGTCCAAGAAGTATGCATACGAGTCTTGTCTGC GATTGTATATTTTCTCTCAGTGCTGATGCCCATCATGACTCCGCCCCACG CCTCCCTCCCCCTTGATCCCGCTGCTTCCTCGTTCGTTCTCCGTCTTGGC CTTTGCCGACAACGACAACGACAACGACAACGATAACGACAACCCCGACA GCTGTGCCTGGTGTATATCATCATCACGTACATACACATCTGCCTGCCCT GCATCCTGCTCATGCTGCTGGTGCCGGTGCTGTGCTTCTGCCTCCCGTGC GTGATCCGGTTGATGGGGATGCTGCAAGGACCGCAGAGACGGAAAGGGGC TAGGCAGGATGAAATCGAGAAACTACCCGTT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13632:73..2653-

>mRNA_E-fasciculatus_F_contig13632.2693.1 ID=mRNA_E-fasciculatus_F_contig13632.2693.1|Name=mRNA_E-fasciculatus_F_contig13632.2693.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1152bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13632:73..2653- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCACATAGCCGACGATGGCGTGCGCGGCATGAGCGCCAGCAGGCTTGG
CCTCCTCCTGCTCACCCTCGTGAACCTCCCGCTGATTGCGGCTGGTGTGG
TTATCCTAACCCTCCACTGGCAAGACACGGACGTCTGCGATGTGGACCAC
CGGCGGAAGTGGAAGTGGTGGGCGCTGCTGTCGGTTGTGAGGATGGTGGT
CATTACTCCGGTGGTCATGATGCACATAGCCGACGATGGCGTGCGCGGCA
TGAGCGCCAGCAGGCTTGGCCTCCTCCTGCTCACCCTCGTGAACCTCCCG
CTGATTGCGGCTGGTGTGGTTATCCTAACCCTCCACTGGCAAGACACGGA
CGTCTGCGATGTGGACCACCGGCGGAAGTGGAAGTGGTGGGCGCTGCTGT
CGGTTGTGAGGATGGTGGTCATTACTCCGGTGGTCATGGTGAGATGGAGG
GTGGAGGGTCAGAGGGAGGAAGACCGGAACCAGGCGATCGATCACCTGTC
TAGCAACATGCGGAATTCTCTGGATATTGTCGGGCTCGTGTGGTTCGTGA
TCGGACACATGTGGTTGCTACAAAACCAAGGGTGAGATGGAGGGTGGAGG
GTCAGAGGGAGGAAGACCGGAACCAGGCGATCGATCACCTGTCTAGCAAC
ATGCGGAATTCTCTGGATATTGTCGGGCTCGTGTGGTTCGTGATCGGACA
CATGTGGTTGCTACAAAACCAAGGGTGTGAAAACCCGAGGGACTCGCCGA
TCTACCAGGTGTGAAAACCCGAGGGACTCGCCGATCTACCAGCTGTGCCT
GGTGTATATCATCATCACGTACATACACATCTGCCTGCCCTGCATCCTGC
TCATGCTGCTGGTGCCGGTGCTGTGCTTCTGCCTCCCGTGCGTGATCCGG
TTGATGGGGATGCTGCAAGGACCGCAGAGACGGAAAGGGGCTAGGCAGGA
TGAAATCGAGAAACTACCCGTTCTGTGCCTGGTGTATATCATCATCACGT
ACATACACATCTGCCTGCCCTGCATCCTGCTCATGCTGCTGGTGCCGGTG
CTGTGCTTCTGCCTCCCGTGCGTGATCCGGTTGATGGGGATGCTGCAAGG
ACCGCAGAGACGGAAAGGGGCTAGGCAGGATGAAATCGAGAAACTACCCG
TT
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