mRNA_E-fasciculatus_F_contig13623.2690.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13623.2690.1 vs. uniprot
Match: A0A6H5KKX3_9PHAE (M1PDH protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKX3_9PHAE) HSP 1 Score: 154 bits (389), Expect = 2.590e-44 Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 1
Query: 1 AKELREHDLLAYHTASPEIQEELWAWIVVRCLDLLHRFGVDMLKNAHGVETEEEVFEILLDYGRQTLDRFSSVVDSTSR 237
AKELREHDLL+YHTASPEIQEELWAWIVVRCLDLL RFGV+MLKNAH VETEEEVFEILLDYGRQTLDRFSSVVDSTSR
Sbjct: 135 AKELREHDLLSYHTASPEIQEELWAWIVVRCLDLLDRFGVEMLKNAHSVETEEEVFEILLDYGRQTLDRFSSVVDSTSR 213
BLAST of mRNA_E-fasciculatus_F_contig13623.2690.1 vs. uniprot
Match: D7G793_ECTSI (Mannitol 1-phosphate dehydrogenase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G793_ECTSI) HSP 1 Score: 155 bits (391), Expect = 8.640e-44 Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 1
Query: 1 AKELREHDLLAYHTASPEIQEELWAWIVVRCLDLLHRFGVDMLKNAHGVETEEEVFEILLDYGRQTLDRFSSVVDSTSR 237
AKELREHDLLAYHTASPEIQEELWAWIVVRCLDLL RFGV+MLKNAH VETEEEVFE+LLDYGRQTLDRFSSVVDSTSR
Sbjct: 282 AKELREHDLLAYHTASPEIQEELWAWIVVRCLDLLDRFGVEMLKNAHSVETEEEVFEVLLDYGRQTLDRFSSVVDSTSR 360
BLAST of mRNA_E-fasciculatus_F_contig13623.2690.1 vs. uniprot
Match: A0A2Z4BWZ7_SACJA (Mannitol-1-phosphate dehydrogenase 2 n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2Z4BWZ7_SACJA) HSP 1 Score: 134 bits (338), Expect = 1.400e-36 Identity = 65/79 (82.28%), Postives = 71/79 (89.87%), Query Frame = 1
Query: 1 AKELREHDLLAYHTASPEIQEELWAWIVVRCLDLLHRFGVDMLKNAHGVETEEEVFEILLDYGRQTLDRFSSVVDSTSR 237
AKELREHDLLAY TASPEI+ ELWAW+VVRCL LL FGVDMLK+AH +ETEEEVF++LLDYG Q LDRFSSVVDSTSR
Sbjct: 162 AKELREHDLLAYDTASPEIRAELWAWVVVRCLALLDEFGVDMLKSAHDLETEEEVFDVLLDYGGQALDRFSSVVDSTSR 240
BLAST of mRNA_E-fasciculatus_F_contig13623.2690.1 vs. uniprot
Match: A0A0G4I719_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I719_9ALVE) HSP 1 Score: 81.6 bits (200), Expect = 2.680e-16 Identity = 37/74 (50.00%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 16 EHDLLAYHTASPEIQEELWAWIVVRCLDLLHRFGVDMLKNAHGVETEEEVFEILLDYGRQTLDRFSSVVDSTSR 237
EH+L+ + TA+ +E LWAW V RC+ + VD++K+AH V T++EV EILL Y ++TLDRFS+V D+T+R
Sbjct: 416 EHELMTWETATEAEKERLWAWAVSRCILCVFEHDVDIIKSAHNVTTDKEVCEILLAYAKKTLDRFSTVKDTTTR 489
BLAST of mRNA_E-fasciculatus_F_contig13623.2690.1 vs. uniprot
Match: A0A061RXH7_9CHLO (Mannitol 1-phosphate dehydrogenase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RXH7_9CHLO) HSP 1 Score: 77.0 bits (188), Expect = 1.120e-14 Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 10 LREHDLLAYHTASPEIQEELWAWIVVRCLDLLHRFGVDMLKNAHGVETEEEVFEILLDYGRQTLDRFSSVVDSTSR 237
L E LL Y ASP+++E +WAW V + L L+ GVD++ AH E++EE+ E +L RQTL+RFSS+ D+TSR
Sbjct: 370 LPELPLLNYAEASPDVKESVWAWAVAQILVLMKEKGVDVMTQAHNAESDEELVEQMLAVARQTLERFSSIEDTTSR 445
BLAST of mRNA_E-fasciculatus_F_contig13623.2690.1 vs. uniprot
Match: A0A0G4FY26_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FY26_9ALVE) HSP 1 Score: 76.6 bits (187), Expect = 1.540e-14 Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = 1
Query: 16 EHDLLAYHTASPEIQEELWAWIVVRCLDLLHRFGVDMLKNAHGVETEEEVFEILLDYGRQTLDRFSSVVDSTSR 237
+H+L+ + + E + +W W V RC+ H+ VD++K+AHGV ++EEV ILL Y R TLDRFS+V D+TSR
Sbjct: 389 DHELVNWAQGTEEDRRMMWNWAVARCILCCHQHTVDVIKSAHGVTSDEEVCRILLAYARSTLDRFSTVRDTTSR 462
BLAST of mRNA_E-fasciculatus_F_contig13623.2690.1 vs. uniprot
Match: A0A0G4EUF0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EUF0_VITBC) HSP 1 Score: 69.7 bits (169), Expect = 4.230e-12 Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 13 REHDLLAYHTASPEIQEELWAWIVVRCLDLLHRFGVDMLKNAHGVETEEEVFEILLDYGRQTLDRFSSVVDSTSR 237
R HDLL T E Q E++AW V R L +L++ ++K+AHGV +E+V +IL+DY +TL RF+++ D+T R
Sbjct: 445 RSHDLLTSATLPEEKQREVYAWAVARVLMILNQHDKHVIKHAHGVLEDEKVAQILIDYATRTLQRFTTIPDTTGR 519
BLAST of mRNA_E-fasciculatus_F_contig13623.2690.1 vs. uniprot
Match: A0A7S3SQ70_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SQ70_9SPIT) HSP 1 Score: 67.0 bits (162), Expect = 3.770e-11 Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 1
Query: 7 ELREHDLLAYHTASPEIQEELWAWIVVRCLDLLHRFGVDMLKNAHGVETEEEVFEILLDYGRQTL-DRFSSVVDSTSR 237
E RE+ LL Y + + Q AW+ +R L+ ++GV+ L HGVET+E+V+++LLDYG Q L +RFS V D SR
Sbjct: 449 EAREYVLLKYDSMPRKQQLMCEAWVTLRAAQLISKYGVENLMQWHGVETQEQVWDVLLDYGEQVLIERFSQVDDVVSR 526
BLAST of mRNA_E-fasciculatus_F_contig13623.2690.1 vs. uniprot
Match: A0A6P6S003_9EIME (uncharacterized protein LOC34620999 n=2 Tax=Cyclospora cayetanensis TaxID=88456 RepID=A0A6P6S003_9EIME) HSP 1 Score: 66.6 bits (161), Expect = 5.140e-11 Identity = 30/76 (39.47%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 10 LREHDLLAYHTASPEIQEELWAWIVVRCLDLLHRFGVDMLKNAHGVETEEEVFEILLDYGRQTLDRFSSVVDSTSR 237
LR+ LL + ++ +WAW+ RCL +L +++K H ++T+EEV E+LL YG++TL RFS+V D+ R
Sbjct: 497 LRQVPLLKEGEMVDKQKDIMWAWLAARCLHVLWEHDKEVIKRTHNIQTDEEVVEMLLTYGKKTLSRFSTVEDTAGR 572
BLAST of mRNA_E-fasciculatus_F_contig13623.2690.1 vs. uniprot
Match: U6KQC9_EIMTE (Mannitol-1-phosphate dehydrogenase n=1 Tax=Eimeria tenella TaxID=5802 RepID=U6KQC9_EIMTE) HSP 1 Score: 64.3 bits (155), Expect = 3.230e-10 Identity = 29/76 (38.16%), Postives = 47/76 (61.84%), Query Frame = 1
Query: 10 LREHDLLAYHTASPEIQEELWAWIVVRCLDLLHRFGVDMLKNAHGVETEEEVFEILLDYGRQTLDRFSSVVDSTSR 237
LR LL + +E +WAW+ RCL +L +++K H ++T++EV +LL+YG++TL RFS+V D+ R
Sbjct: 287 LRSVPLLKETEMQQQQKETMWAWLTARCLQVLWEHDKEVIKRTHNLKTDDEVVAMLLNYGKKTLARFSTVDDTAGR 362 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13623.2690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13623.2690.1 >prot_E-fasciculatus_F_contig13623.2690.1 ID=prot_E-fasciculatus_F_contig13623.2690.1|Name=mRNA_E-fasciculatus_F_contig13623.2690.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=80bp AKELREHDLLAYHTASPEIQEELWAWIVVRCLDLLHRFGVDMLKNAHGVEback to top mRNA from alignment at E-fasciculatus_F_contig13623:152..1068+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13623.2690.1 ID=mRNA_E-fasciculatus_F_contig13623.2690.1|Name=mRNA_E-fasciculatus_F_contig13623.2690.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=917bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13623:152..1068+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13623:152..1068+ >mRNA_E-fasciculatus_F_contig13623.2690.1 ID=mRNA_E-fasciculatus_F_contig13623.2690.1|Name=mRNA_E-fasciculatus_F_contig13623.2690.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=480bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13623:152..1068+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |