mRNA_E-fasciculatus_F_contig1361.2684.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1361.2684.1 vs. uniprot
Match: D7FSP6_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP6_ECTSI) HSP 1 Score: 480 bits (1236), Expect = 1.450e-162 Identity = 241/248 (97.18%), Postives = 246/248 (99.19%), Query Frame = 3
Query: 3 EHEWAERASGSGKEDTAVIQFHSLQEAALRRFEGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLAGVRKVLLPFTGKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMIPLCNVDGVASVLFTKRSGTMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQIHPNPDEV 746
EHEWAERA+GSGKEDTAVIQFHSLQEAALRRFEGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDL+GVR+VLLPFT KQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVM+PLCNVDGVASVLFTKRSG MRAYKNDVCFPGGKVDIGQDQHII+TAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQIHPNPDEV
Sbjct: 247 EHEWAERAAGSGKEDTAVIQFHSLQEAALRRFEGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRRVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIETAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQIHPNPDEV 494
BLAST of mRNA_E-fasciculatus_F_contig1361.2684.1 vs. uniprot
Match: A0A6H5JIG8_9PHAE (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG8_9PHAE) HSP 1 Score: 477 bits (1227), Expect = 2.390e-161 Identity = 240/248 (96.77%), Postives = 244/248 (98.39%), Query Frame = 3
Query: 3 EHEWAERASGSGKEDTAVIQFHSLQEAALRRFEGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLAGVRKVLLPFTGKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMIPLCNVDGVASVLFTKRSGTMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQIHPNPDEV 746
EHEWAERASGSGKEDTAVIQFHSL+EAALRRFEG GVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDL+GVRKVLLPFT KQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVM+PLCNVDGVASVLFTKRSG +RAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLS EQIHPNPDEV
Sbjct: 237 EHEWAERASGSGKEDTAVIQFHSLKEAALRRFEGFGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRKVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNLRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSLEQIHPNPDEV 484
BLAST of mRNA_E-fasciculatus_F_contig1361.2684.1 vs. uniprot
Match: A0A4D9DAL0_9STRA (Nudix hydrolase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAL0_9STRA) HSP 1 Score: 235 bits (599), Expect = 5.550e-70 Identity = 126/245 (51.43%), Postives = 164/245 (66.94%), Query Frame = 3
Query: 18 ERASGSGKEDTAVIQFHSLQEAALRRFEGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLAGVRKVLLPFTGKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMIPLCNVDGVASVLFTKRSGTMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQIHPNPDEVRE 752
E+ S + K TA + SL A +F+ LGVI+ K D+ ++ ++T PALAA LRDRE L CA LLE G+L + +VL P+ + + RR LDL G T H+ LRK LQR PR +T RASV+IPLCNV+GVASVLF +RS +R++KN VCFPGG V+ D +II+T++REM EEIG SVDVLGVLRCDWSEV + G+ VTPVVGFLG+L+++++ PNP EV E
Sbjct: 24 EQMSANEKSHTAATENKSLHSHA--QFKSLGVIEPSKDLDLQLMITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAG-GLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKNQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAE 265
BLAST of mRNA_E-fasciculatus_F_contig1361.2684.1 vs. uniprot
Match: A0A7S2USV2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USV2_9STRA) HSP 1 Score: 229 bits (585), Expect = 4.480e-67 Identity = 113/219 (51.60%), Postives = 161/219 (73.52%), Query Frame = 3
Query: 90 RRFEGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLAGVRKVLLPFTGKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMIPLCNVDGVASVLFTKRSGTMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQIHPNPDEV 746
R+ GLGVI DK +D+ LV+++TAPALA+ALRDRE LH+ A LLE +L +RK+L PF + R ++L EGF H++ +RK L R+PR ++ +RA+V++ LCNVDGV S+LF+KRS + ++KN+VCFPGG VD QD ++++T +RE+ EEIGI +++V++LGVLRCDW EV S++GVAVTPVVGF+ +LS +++ PNPDEV
Sbjct: 98 RKRSGLGVISPDKTQDLDLLVKNYTAPALASALRDREEVLHVAAQLLESEELDELRKLLRPFHHSNLERHRTKKRDMNLS-EGFQAKHLHMIRKYLHRMPRQISRSASRRAAVLLTLCNVDGVPSILFSKRSDKVTSHKNEVCFPGGHVD-EQDDNVVETCLREVREEIGIPDTTVEILGVLRCDWGEVESIVGVAVTPVVGFIDDLSLKKLKPNPDEV 314
BLAST of mRNA_E-fasciculatus_F_contig1361.2684.1 vs. uniprot
Match: A0A7S3Y7X1_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Y7X1_9EUKA) HSP 1 Score: 219 bits (558), Expect = 9.840e-63 Identity = 117/237 (49.37%), Postives = 163/237 (68.78%), Query Frame = 3
Query: 39 KEDTAVIQFHSLQEAALRRFEGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLAGVRKVLLPFTGKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMIPLCNVDGVASVLFTKRSGTMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQI-HPNPDEV 746
KE + +F L +A++ G GVI EDKA D+ LV++FTAPALAAALRDRE LH+CA LLE+ + + KVL PF +++E R ++ L EGF H+Y +RK L R+PR + E+RASV++PLCN GVA +LF +RS T+R++K+ VCFPGG VD D +I++T +REM EE+GI ++ DV GVLRCDW +A ++GV+VTPVVG++G++ + NPDEV
Sbjct: 90 KEKRKMDEFTGLDLSAIK---GYGVIHEDKARDLKHLVDNFTAPALAAALRDREETLHICATLLEEDRMDELHKVLRPFHTTKISERRLKRRKMFLH-EGFKSEHIYMIRKYLHRMPRQLPRYAEKRASVILPLCNSQGVACLLFQRRSDTVRSHKSQVCFPGGVVDNRLDANIVETCLREMHEEMGI-DAVQDVCGVLRCDWGTIAKIVGVSVTPVVGWMGDIEDYDFSNMNPDEV 321
BLAST of mRNA_E-fasciculatus_F_contig1361.2684.1 vs. uniprot
Match: A0A7S3MB31_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MB31_9STRA) HSP 1 Score: 211 bits (538), Expect = 1.100e-61 Identity = 107/207 (51.69%), Postives = 146/207 (70.53%), Query Frame = 3
Query: 132 EDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLAGVRKVLLPFTGKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMIPLCNVDGVASVLFTKRSGTMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQIHPNPDEVRE 752
+DI+ LV++FTAPALA ALRDRE L A L G+ ++++L+PF + V R LDL +GFT+ + L++ L R+PRHV E+RASV+IPLCNV+GVASVLF +RS +R +K VCFPGG +D G D IIQT++REM EE+GI ++VLG+LRC+W+EVAS+ G+AVTPV+GF+G L+ + PN DEV +
Sbjct: 4 DDINVLVQNFTAPALAEALRDREITLQRAATLFFSGETEELKELLVPFLDESVERRRLRHHHLDLS-KGFTRKEIVILQRYLHRMPRHVFHNAERRASVIIPLCNVNGVASVLFERRSMKVRTHKQQVCFPGGMLDEGVDSTIIQTSLREMEEELGIPREKIEVLGILRCNWNEVASMTGIAVTPVIGFIGELNDLVLTPNSDEVEQ 209
BLAST of mRNA_E-fasciculatus_F_contig1361.2684.1 vs. uniprot
Match: A0A482SUV1_9ARCH (CoA pyrophosphatase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUV1_9ARCH) HSP 1 Score: 208 bits (529), Expect = 2.760e-59 Identity = 102/216 (47.22%), Postives = 145/216 (67.13%), Query Frame = 3
Query: 105 LGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLAGVRKVLLPFTGKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMIPLCNVDGVASVLFTKRSGTMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQIHPNPDEVRE 752
+G+ +++DI LV +FTAPALA ALRDRE L A L +QGD ++ +L PF K + +SR DL GF++ + ++ L R+PR+V +E+RASV+IPLCNV G+ S+LF +RS T+R +K VCFPGG V+ G D +I+T +REM EE+G+ +VLG+LRC+W+EVAS+ G+AVTPVVG++G L + PN DEV +
Sbjct: 85 VGIFHSAESDDIQELVNNFTAPALATALRDREDILQNAALLADQGDFERLKNLLFPFLKKNIEQSRMRNFSFDLS-NGFSRKALLLIQGYLHRMPRYVYHGSERRASVVIPLCNVQGIPSILFERRSATVRTHKQQVCFPGGMVEYGVDASVIETCLREMEEELGVPSDKTEVLGILRCNWNEVASMTGIAVTPVVGYIGELKDITLKPNADEVEK 299
BLAST of mRNA_E-fasciculatus_F_contig1361.2684.1 vs. uniprot
Match: A0A7S0DGZ8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DGZ8_9EUKA) HSP 1 Score: 204 bits (520), Expect = 1.770e-58 Identity = 106/207 (51.21%), Postives = 145/207 (70.05%), Query Frame = 3
Query: 90 RRFEGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLAGVRKVLLPFTGKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMIPLCNVDGVASVLFTKRSGTMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNL 710
R +G GV+ EDK D+ LV++FTAPALAAALRDRE LH+C+ LLE+G +RKVL PF +++E RR ++ L +GF H+Y +RK L RLPR + E+RASVM+PLCN GVA VLF RS +R++K+ VCFPGG VD +D +I++T +RE+ EE+GI + DV GVLR DW + L+GV+VTPVV ++G++
Sbjct: 99 RSIKGYGVVFEDKRRDLKHLVDNFTAPALAAALRDREETLHICSTLLEEGREEELRKVLRPFHTTKISERRRKRRKMFLH-DGFQSEHVYMIRKYLHRLPRQLPRYAEKRASVMLPLCNSQGVACVLFQYRSDNVRSHKSQVCFPGGIVDNRKDSNIVETCLRELEEEMGISQVR-DVCGVLRLDWGTILKLVGVSVTPVVAWMGDI 303
BLAST of mRNA_E-fasciculatus_F_contig1361.2684.1 vs. uniprot
Match: B8CB77_THAPS (Nudix hydrolase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB77_THAPS) HSP 1 Score: 209 bits (532), Expect = 1.420e-57 Identity = 106/217 (48.85%), Postives = 146/217 (67.28%), Query Frame = 3
Query: 105 LGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLAGVRKVLLPFTGKQVAESRRALGR-LDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMIPLCNVDGVASVLFTKRSGTMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQIHPNPDEVRE 752
LGV++ED ED+ L+E++T ALA+ALRDRE L +CA+LL + V K+L P+ K + + R + G+ LD GF + +RK L R+ R V+T +RA V++PLCNVDGV +LF KRS +RA+ ++VC PGG V G D+ I+QT +REM EEIGI ++ VLGVLRC+W EV L+GVAVTPVV ++G + Q++PN DEV E
Sbjct: 277 LGVLREDPHEDMRLLLENYTVAALASALRDREDTLQLCANLLSSNRIEEVSKILRPYEPKYIHQRRHSKGKMLDFRRGGFDNQSIELIRKGLNRMHRRVSTAHSKRAGVVLPLCNVDGVPCILFEKRSRDLRAHPDEVCLPGGMVSEGGDKSIVQTCLREMEEEIGIEHNAASVLGVLRCNWGEVHHLVGVAVTPVVCYIGQVGMSQLNPNSDEVAE 493
BLAST of mRNA_E-fasciculatus_F_contig1361.2684.1 vs. uniprot
Match: A0A7S3V6J2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6J2_9STRA) HSP 1 Score: 199 bits (505), Expect = 8.240e-55 Identity = 108/228 (47.37%), Postives = 148/228 (64.91%), Query Frame = 3
Query: 75 QEAALRRFEGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLAGVRKVLLPFTGKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMIPLCNVDGVASVLFTKRSGTMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEI-GILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQIHPNPDEVRES 755
+E R LGV++ED ED+ L+E++T PALA+ALRDRE L +CA L + + + +L PF K V + R + LDL +GF ++ +RK L R+PR V+ +RA V++PLCNV+GV VLF KRS +RA+ ++VC PGG V D+ I+ T +REM EEI GI E++V LGVLRC+W EV L+GVAVTPVV ++G + QI PN DEV E+
Sbjct: 147 REGGRMRERKLGVLREDPKEDMRLLIENYTVPALASALRDREDVLQLCATLFAEQKMEELSMILRPFERKYVEKRRLSKINLDLT-KGFDSANIQQVRKGLNRMPRRVSQAHSRRAGVVLPLCNVNGVPCVLFEKRSAQLRAHADEVCLPGGMVSAASDKSIVATCLREMDEEIEGIGEATV--LGVLRCNWGEVHHLVGVAVTPVVCYIGEIGDSQISPNSDEVAEA 371 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1361.2684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1361.2684.1 >prot_E-fasciculatus_F_contig1361.2684.1 ID=prot_E-fasciculatus_F_contig1361.2684.1|Name=mRNA_E-fasciculatus_F_contig1361.2684.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=252bp MCAHLLEQGDLAGVRKVLLPFTGKQVAESRRALGRLDLEPEGFTKTHMYAback to top mRNA from alignment at E-fasciculatus_F_contig1361:97..3555+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1361.2684.1 ID=mRNA_E-fasciculatus_F_contig1361.2684.1|Name=mRNA_E-fasciculatus_F_contig1361.2684.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3459bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1361:97..3555+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1361:97..3555+ >mRNA_E-fasciculatus_F_contig1361.2684.1 ID=mRNA_E-fasciculatus_F_contig1361.2684.1|Name=mRNA_E-fasciculatus_F_contig1361.2684.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1512bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1361:97..3555+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |