mRNA_E-fasciculatus_F_contig1360.2678.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1360.2678.1
Unique NamemRNA_E-fasciculatus_F_contig1360.2678.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A7C3H372_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C3H372_9CHLR)

HSP 1 Score: 249 bits (635), Expect = 3.400e-78
Identity = 133/223 (59.64%), Postives = 159/223 (71.30%), Query Frame = 2
Query:  143 QARYRRPSSSGITPTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLLL 811
            QAR   P        R+++GHGSGSFGHVA AK+ T  GV  A QWRGF +VS AA RLNRLVT ALL AGVPA+SLQP AS VC  GR+ ++A  PI+AAL +G++PV+HGDVAFD   GGT+ STEE+   L   L+P WLLLAGETEGV    G  +P I PE+L  +E +LGGSRGTDVTGGMA+KVRDM++LV   P  RIRIFSGL+P  + R L  
Sbjct:   36 QARQANPD------LRLVLGHGSGSFGHVAGAKYGTRQGVRTAQQWRGFAEVSAAALRLNRLVTEALLAAGVPAVSLQPCASVVCEDGRITAIAAHPIQAALTSGLLPVIHGDVAFDTVRGGTIVSTEEVMMALVETLRPSWLLLAGETEGVLDLAGQVIPRIMPETLPQVEAALGGSRGTDVTGGMAAKVRDMLALVTEQPAMRIRIFSGLTPDLLPRVLAF 252          
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A2E0ZCB3_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZCB3_9CHLR)

HSP 1 Score: 235 bits (599), Expect = 2.200e-72
Identity = 126/225 (56.00%), Postives = 161/225 (71.56%), Query Frame = 2
Query:  143 QARYRRPSSSGITPTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLLLAA 817
            QAR   P+       R+++G GSGSFGHVAAAKH T  GV+ A  WRGF +VSDAA+RLNR+V + LL  GVPA+SL P+AS  C  GR+ ++A  P++AAL AG+VPVV+GDVAFD   GGT+ STEE+   L  E++P WLLLAGET GV+  +   +  IS  + + IE +LGGSRGTDVTGGMASKV+ M++LV++ P   IRIFSGL PG + +TLL  A
Sbjct:   63 QARRENPA------LRLVLGQGSGSFGHVAAAKHGTRHGVTDAAGWRGFAEVSDAAARLNRMVVSELLLVGVPAVSLSPSASVGCVDGRIQTIAVQPVQAALAAGLVPVVYGDVAFDSVRGGTIVSTEEVMMALVAEIRPSWLLLAGETTGVYDLEEQVISRISRANYAEIEAALGGSRGTDVTGGMASKVQSMLALVDAFPQLAIRIFSGLEPGNLAQTLLNPA 281          
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A0S8AVD4_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Anaerolineae bacterium SG8_19 TaxID=1703386 RepID=A0A0S8AVD4_9CHLR)

HSP 1 Score: 234 bits (596), Expect = 2.670e-72
Identity = 126/225 (56.00%), Postives = 157/225 (69.78%), Query Frame = 2
Query:  134 NELQARYRRPSSSGITPTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLL 808
            N L +  R   SS     ++++GHGSGSFGHVAA K+ T  G+    QW+GF +VS AA+RLN  V  +LL   VPA+SLQP+ASA CR GR+V+M T  +KAA+EAG+VP+V+GDVAFD  LGGT+ STEEI +FLA +L+P WLLLAGETEGV   DG  +P I+  ++  I+  L GSRGTDVTGGMASKV  M+ LVE  P   + IFSGL  G I   LL
Sbjct:   31 NRLVSEIREALSS-KPELQLVLGHGSGSFGHVAANKYGTRQGIHTQDQWKGFAEVSSAAARLNAQVRESLLVKNVPAVSLQPSASAECRKGRIVNMGTTQVKAAIEAGLVPIVYGDVAFDSVLGGTIISTEEILSFLAADLRPTWLLLAGETEGVLSDDGRIIPLITKSNIGQIQNQLSGSRGTDVTGGMASKVNQMLELVEKDPNLSVLIFSGLKGGNISGRLL 254          
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A6L3F9Z2_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L3F9Z2_9CHLR)

HSP 1 Score: 233 bits (594), Expect = 4.870e-72
Identity = 120/206 (58.25%), Postives = 154/206 (74.76%), Query Frame = 2
Query:  188 RVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTL 805
            ++++GHGSGSFGHVAAAK+ T  GVS   +W GF +VS AA+RLNR+V  AL +AGVPA++LQP+AS VC  GR+  +AT PI+ AL+AG++PVVHGDVAFD   GGT+ STEE+   +A  L+P WLLLAGET GV   +G  +P+I+ ESL  I  +LGGSRGTDVTGGMASKV  M+ L++      IRIFSGL+ G ++ TL
Sbjct:   46 KLLMGHGSGSFGHVAAAKYGTRQGVSSPSEWAGFSEVSSAAARLNRIVVDALQEAGVPALTLQPSASVVCENGRIAQIATTPIQHALDAGLLPVVHGDVAFDTVRGGTIISTEEVMMAVAETLQPSWLLLAGETAGVLDQNGTIIPKITRESLPEIASALGGSRGTDVTGGMASKVNSMLQLIDEHSQLNIRIFSGLNEGQLRTTL 251          
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A160T015_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Candidatus Promineofilum breve TaxID=1806508 RepID=A0A160T015_9CHLR)

HSP 1 Score: 233 bits (593), Expect = 6.890e-72
Identity = 124/207 (59.90%), Postives = 153/207 (73.91%), Query Frame = 2
Query:  188 RVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLL 808
            R+++GHGSGSFGHVA A+H T  GV G  QW GF +V+DAA+RLNR V AALL AGVPA+ L P+ASA+   G +  +A API+AAL AG+ PVV GDVAFD   GGT+ STEE+  +LA  L+P W LLAGETEGV  G+G  +P I+  +L S   +LGGSRGTDVTGGMA+KV  M++LVE+ PG  IRIFSGL PG + R L+
Sbjct:   46 RLVLGHGSGSFGHVAGARHGTRAGVVGPAQWAGFAEVADAAARLNRHVIAALLAAGVPAVGLPPSASALVSDGYIRELAVAPIQAALAAGVTPVVFGDVAFDAARGGTIISTEEVMDYLAARLRPAWFLLAGETEGVLDGEGNLIPLITASNLPSYLPALGGSRGTDVTGGMAAKVAAMVALVEANPGLAIRIFSGLIPGLLTRLLV 252          
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: D8LBJ6_ECTSI (Aspartate/glutamate/uridylate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBJ6_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 8.610e-72
Identity = 138/238 (57.98%), Postives = 143/238 (60.08%), Query Frame = 2
Query:  134 NELQARYRRPSSSGITPTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLLLAAGRDGQEPTQG 847
            +E     R   S     TRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNR                                                                                WLLLAGETEGVFGGDGACVPEIS ESL SIEGSLGGSRGTDVTGGMASKVRDMISLVESLPG+RIRIFSGL+PGG+KRTLLLAAGR+GQEPTQG
Sbjct:   11 DETCREIREAISEWDDTTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNR--------------------------------------------------------------------------------WLLLAGETEGVFGGDGACVPEISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGLTPGGVKRTLLLAAGREGQEPTQG 168          
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A3B0VP81_9ZZZZ (Isopentenyl phosphate kinase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0VP81_9ZZZZ)

HSP 1 Score: 228 bits (580), Expect = 1.100e-69
Identity = 122/224 (54.46%), Postives = 156/224 (69.64%), Query Frame = 2
Query:  146 ARYRRPSSSGITPTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLLLAA 817
            A  RR + S     R+++GHGSGSFGHVAAAKH T  GV+    WRGF +V DAA+RLNRL+  ALL AG+PA+SL P+ASAVC+ GR+  +    + AAL+AG++PVV+GDVAFD   GGT+ STEE+   +   L+P WLLLAGET GV+      +P IS  + + +   LGGSRGTDVTGGMASKV+ M+SL+E  P   IRIFSGL    +++TLL  A
Sbjct:   47 AEARRKNGS----LRLLLGHGSGSFGHVAAAKHGTRQGVATPAGWRGFAEVGDAAARLNRLLMTALLAAGLPAVSLPPSASAVCKNGRIQQIGVENVAAALDAGLLPVVYGDVAFDSVRGGTIVSTEEVMMAMVGRLRPSWLLLAGETAGVYDRQQQVIPTISQTNYAEVATVLGGSRGTDVTGGMASKVQGMLSLLEQFPHLSIRIFSGLESNNVRQTLLNPA 266          
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A3M1ZMT5_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1ZMT5_9CHLR)

HSP 1 Score: 226 bits (577), Expect = 1.710e-69
Identity = 115/205 (56.10%), Postives = 150/205 (73.17%), Query Frame = 2
Query:  191 VIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTL 805
            +++GHG GSFGHVAAA++ T  GV  A QWRGF +VS A +RLN  +    L+AGVPA+ LQP+ASA+CR G+LV + T  +  AL+AG+VPVVHGDVAFD+  GGT+ STEE+  FL   ++P WLLLAGETEGV   +G  +P I P++ + I   LGGSRGTDVTGGMA+KV+ M++L   LPG ++RIFSGL  G + + L
Sbjct:   45 LLIGHGGGSFGHVAAARYQTRQGVRTAAQWRGFAEVSAAMNRLNTELINTFLQAGVPAIRLQPSASAMCRDGQLVQLDTTAVLTALQAGLVPVVHGDVAFDEVRGGTIISTEEVMDFLVARIRPFWLLLAGETEGVLDDEGRVIPHIHPDNFAQIAPLLGGSRGTDVTGGMAAKVQAMVALAGRLPGLQVRIFSGLESGVVAQVL 249          
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A2G6GE47_9CHLR (Isopentenyl phosphate kinase n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2G6GE47_9CHLR)

HSP 1 Score: 223 bits (569), Expect = 2.660e-68
Identity = 123/230 (53.48%), Postives = 154/230 (66.96%), Query Frame = 2
Query:  119 VGRF*NELQARYRRPSSSGITPTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLL 808
            +GR   E+ A  R   +      R++VGHG GSFGHVAAAK  T  GV  A QW  F +V  A +RLNRLV  ALL AGVPA+SLQP+A  +C  GR+  + TAP+ AAL AG+VPV++GDVAFD E+GGT+ STEE+   LA  L+P WLLLAGE  GV  G G  VP+I+  +   I+ +LGGSRGTDVTGGM SKV+ M++LVE      IRI +GL  G ++  LL
Sbjct:   27 LGRVVKEIAAARRENPA-----LRLVVGHGGGSFGHVAAAKSHTRQGVRTAEQWHDFAEVHAAMARLNRLVVEALLAAGVPALSLQPSAGVLCENGRIKQIETAPMLAALAAGLVPVIYGDVAFDSEIGGTIVSTEEVVMALADALQPTWLLLAGEVPGVLDGQGEVVPKITAVTFDDIKPALGGSRGTDVTGGMTSKVQSMLALVEKQAALSIRILTGLESGVVQGALL 251          
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A6L9INU9_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L9INU9_9CHLR)

HSP 1 Score: 215 bits (548), Expect = 3.720e-65
Identity = 110/210 (52.38%), Postives = 153/210 (72.86%), Query Frame = 2
Query:  188 RVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLLLAA 817
            R+++GHGSGSFGH  A ++ T++GV    +WRGF  V+  A+ LN+LV  ALL AGVP M +QP+ASAV R G +V MAT P++A L+ G+VP+V+GDVA D+  GGT+ STE +F +LAR +    ++L GE +GV+   G  +P I+P++L  +E +LGGS GTDVTGGMA+KVRDM++LV++ P   IRI SGL PG ++ TLL +A
Sbjct:   44 RLLIGHGSGSFGHFVAERYGTVNGVDSPDEWRGFAHVATVAAELNQLVAQALLDAGVPVMRMQPSASAVSRAGVIVRMATEPLQALLDHGVVPLVYGDVALDEVRGGTIISTETVFFYLARHIPADEIMLLGEVDGVYDQAGQVIPSITPQALPQVERALGGSAGTDVTGGMATKVRDMVALVQAEPRLTIRICSGLVPGLLQATLLGSA 253          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C3H372_9CHLR3.400e-7859.64Isopentenyl phosphate kinase n=1 Tax=Chloroflexi b... [more]
A0A2E0ZCB3_9CHLR2.200e-7256.00Isopentenyl phosphate kinase n=1 Tax=Anaerolineace... [more]
A0A0S8AVD4_9CHLR2.670e-7256.00Isopentenyl phosphate kinase n=1 Tax=Anaerolineae ... [more]
A0A6L3F9Z2_9CHLR4.870e-7258.25Isopentenyl phosphate kinase n=1 Tax=Chloroflexi b... [more]
A0A160T015_9CHLR6.890e-7259.90Isopentenyl phosphate kinase n=1 Tax=Candidatus Pr... [more]
D8LBJ6_ECTSI8.610e-7257.98Aspartate/glutamate/uridylate kinase n=1 Tax=Ectoc... [more]
A0A3B0VP81_9ZZZZ1.100e-6954.46Isopentenyl phosphate kinase n=1 Tax=hydrothermal ... [more]
A0A3M1ZMT5_9CHLR1.710e-6956.10Isopentenyl phosphate kinase n=1 Tax=Chloroflexi b... [more]
A0A2G6GE47_9CHLR2.660e-6853.48Isopentenyl phosphate kinase n=2 Tax=Chloroflexi b... [more]
A0A6L9INU9_9CHLR3.720e-6552.38Isopentenyl phosphate kinase n=1 Tax=Chloroflexi b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1360contigE-fasciculatus_F_contig1360:5279..8587 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score114.4
Seed ortholog evalue6.6e-23
Seed eggNOG ortholog926569.ANT_15950
KEGG rclassRC00002,RC00008,RC00043,RC00062
KEGG koko:K00931,ko:K03430,ko:K06981
KEGG ReactionR00239,R04152,R10093
KEGG Pathwayko00330,ko00332,ko00440,ko00900,ko01100,ko01110,ko01120,ko01130,ko01230,map00330,map00332,map00440,map00900,map01100,map01110,map01120,map01130,map01230
KEGG ModuleM00015
EggNOG free text desc.PFAM aspartate glutamate uridylate kinase
EggNOG OGs2G6TH@200795,COG1608@1,COG1608@2
EC2.6.1.37,2.7.2.11,2.7.4.26
COG Functional cat.S
Best tax levelChloroflexi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionaspartate/glutamate/uridylate kinase
Ec32 orthologEc-27_003730.1
Exons6
Model size1000
Cds size636
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927857.6496696-CDS-E-fasciculatus_F_contig1360:5278..55661622927857.6496696-CDS-E-fasciculatus_F_contig1360:5278..5566Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1360 5279..5566 -
1695995725.9313436-CDS-E-fasciculatus_F_contig1360:5278..55661695995725.9313436-CDS-E-fasciculatus_F_contig1360:5278..5566Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1360 5279..5566 -
1622927857.6872122-CDS-E-fasciculatus_F_contig1360:6027..61751622927857.6872122-CDS-E-fasciculatus_F_contig1360:6027..6175Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1360 6028..6175 -
1695995725.9587922-CDS-E-fasciculatus_F_contig1360:6027..61751695995725.9587922-CDS-E-fasciculatus_F_contig1360:6027..6175Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1360 6028..6175 -
1622927857.7002683-CDS-E-fasciculatus_F_contig1360:6643..67681622927857.7002683-CDS-E-fasciculatus_F_contig1360:6643..6768Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1360 6644..6768 -
1695995725.9707463-CDS-E-fasciculatus_F_contig1360:6643..67681695995725.9707463-CDS-E-fasciculatus_F_contig1360:6643..6768Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1360 6644..6768 -
1622927857.7133205-CDS-E-fasciculatus_F_contig1360:7222..72971622927857.7133205-CDS-E-fasciculatus_F_contig1360:7222..7297Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1360 7223..7297 -
1695995725.9787033-CDS-E-fasciculatus_F_contig1360:7222..72971695995725.9787033-CDS-E-fasciculatus_F_contig1360:7222..7297Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1360 7223..7297 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927857.7226825-UTR-E-fasciculatus_F_contig1360:7297..73371622927857.7226825-UTR-E-fasciculatus_F_contig1360:7297..7337Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1360 7298..7337 -
1695995725.9870453-UTR-E-fasciculatus_F_contig1360:7297..73371695995725.9870453-UTR-E-fasciculatus_F_contig1360:7297..7337Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1360 7298..7337 -
1622927857.731714-UTR-E-fasciculatus_F_contig1360:7613..77911622927857.731714-UTR-E-fasciculatus_F_contig1360:7613..7791Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1360 7614..7791 -
1695995725.9965005-UTR-E-fasciculatus_F_contig1360:7613..77911695995725.9965005-UTR-E-fasciculatus_F_contig1360:7613..7791Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1360 7614..7791 -
1622927857.743115-UTR-E-fasciculatus_F_contig1360:8441..85871622927857.743115-UTR-E-fasciculatus_F_contig1360:8441..8587Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1360 8442..8587 -
1695995726.0049005-UTR-E-fasciculatus_F_contig1360:8441..85871695995726.0049005-UTR-E-fasciculatus_F_contig1360:8441..8587Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1360 8442..8587 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1360.2678.1prot_E-fasciculatus_F_contig1360.2678.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1360 5279..7297 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1360.2678.1

>prot_E-fasciculatus_F_contig1360.2678.1 ID=prot_E-fasciculatus_F_contig1360.2678.1|Name=mRNA_E-fasciculatus_F_contig1360.2678.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=212bp
MSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTV
ASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGS
LGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLLLA
AGRDGQEPTQGDNGSRSKGSGGPTTGGLGTVIVASATTAADVAPAVSTEV
GGEAGGGGGIS*
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mRNA from alignment at E-fasciculatus_F_contig1360:5279..8587-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1360.2678.1 ID=mRNA_E-fasciculatus_F_contig1360.2678.1|Name=mRNA_E-fasciculatus_F_contig1360.2678.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3309bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1360:5279..8587- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGAGCATATTCGAATTCAAACAGCGCGGGGAGGATGGAAGAGAATGCTTC AGACCGACTGGTTTTTATAAAACTCGGTGGAAGCCTCATCTCCGACAAAA CAAAGCCCGAGACCCTGCGTGGGGAGGTTCTGAAACGAATTGCAAGGTGT GGTCATACACATGTCCTCCGATATCTGACGCGTCGTCTATAGTCTAGACT AGCGCAGTAGAGCCTGGATAGATTACGGCAGCAGCATCAGGGCGCCGCAG AAAAGGGCGTTGCATTCTCAAAAGACTTTGACCCGCTAGCGAGCCGACTG ATTCTCTCTCCGTGGAGACTGACTGTCATCAGGCAGCGGGGGGATACATT AGTCTGCTGTAGTTATCCGCCGTCTTGAGTTTTTTCGAGGGTTGTTGACA TGTGCAGATGTTGTAGACACATGTTGCCTATGGGGAACCCTTCCTGGCAA GCACCACCTTTCTACTCGCGTTACCAAGGTGCAATGCTGCAGGAAGACTC ACAATGAGCCTCGCCTTGAGCGTGTGCGCACGTGTCTCCTCAATGAAAAG TTGCACGACAGCAGTGGCTCGGGTCTCTCAAGCGTGACTCCTGTCTCCCA AGTGAAGGGTTATAGTAGAGCGAAGGGTTATAGTAGGAGAGTTGACGTGT TGGCAACCAGCTCGATGCGATGCAGAGCCCCCACCAGTTGTCATTTATCG TCTAGCATAGCGTCAGAAGCCCACCGCCAACCTCGTCGTGGCCCTTGACG AACGAACTCCACCCCACCCTTCGGATCCAACGAATGATACCTGCAGCGAG ATACAGGAGGCCATCTTCGAGTGGGATAACACCGACCAGGGTTATCGTGG GGCACGGTAGCGGGTCGTTCGGGCACGTTGCCGCCGCGAAGCACAGCACT ATCGACGGCGTATCGGGGGCCGTCCAGTGGAGGGGTTTCTGTGACGTCAG CGATGCGGCGTCCCGCCTCAACAGGTACTACGCACACAGCGTATGGCCGG ATGAGTCCTTGTTCGGACAACGATTAACTTGTTGGTGCACAAATACATAT CTCTCCTACTCGAAACTATGTAGTCAATACGCATCCCACGTGGGCCTGCC TACACGTCTTCGTGGACATTAGGTGCTCAATACCAGAGCCAGGTCTGAGA TATTCGGCGGTAGGCGCAACAGCAGCAGCAGCATTTCGAGCAAACGCGTC GTCGTCAAAAGCAACTGCCCTATCGTCACGTATTGCTTGCGCAAGCGCAG GCTCGTAACCGCGGCCTTGCTGAAGGCAGGGGTCCCGGCGATGAGCTTGC AGCCGGCGGCGTCCGCGGTTTGTCGGGGGGGCAGGCTGGTTTCAATGGCG ACGGCACCAATAAAGGTTCGGCACTTATTGAGTCTTTTTTTAGAGTTCTC GGTGGAAGCGACTCTTCTGCAAGACACGTGTTGGGCGAAAGCATCGCTCG CTCTTGGGCGATTGTGTTGTAGCTCTCACGGCAGCAGCAGTGGTAGGTTT TGCTGAACATGCATGATTGCGAACGCGTGCATATTGTGAGGTGCTTGCAC ATACGCACGCATCTTTCGTGAGGTTCTGGGTCCGTCAGCCCGCCCTCCTG CCGCAACCAACGCTTGGAACCGGGGCGTGCTTGAACTTGTTTGAAAATGA ATACTCCTTAGTAGATCGTTAAAACGCTCTTCGACCTTGTGAGGTTTAGG GTACGCTGTTCGCTTGCTTGCGTCGTCAAGTCTTGACTACGACCGGTGAT ATCATCTCTACTGAAGAAGCGATGCTTGCCTGACTCCTCCATGGCACACT TCCGGGCTGCTGGAATCAGGCTGCTTTGGAGGCGGGAATTGTGCCGGTTG TTCACGGCGACGTTGCGTTTGACCAAGAGCTCGGGGGCACCGTGGCATCG ACAGAGGAGATCTTTGCTTTCCTCGCGCGGGAACTGAAGCCACGGTAAGA AGAAAGAGAGAGCACTGAAGCTGAAGCCGCAAAGATGAAGAGAAAAAGGG GAGCCGGTAGGGGGCAAAGCAAGCAAGAGGGGGGGTTGGGGGGGAGGACG AGAGGAGCACAAAGGTCGAGCGAAAGTGAGGAGGCAAGATAGTAAGATGA GAGAGGGGGGGGAGACAGAGGGAGACAGAGAAAGGGACAGACAGACAGAC AGACAGACAGACAGAAGAGCTTGTTGAATATGTGTGGCAATGCTGCAGCT TGAACGCAGCCTCCTGAGCCGAGTATCATTCGCTGCTTCGTTCCCGTAAG ATCTCCACGCAGACTCCTTTTTGGCCCCCACAGCATAATCCCCCCCCCCA CGGAGCCAATATGAGCATGGGCTTTACCGAACACCCAGGCAGCCATGTGG CGAAACTAAACCAGCCGCCACCGCGATATCAAGTCGTGTGCGCACCCCCC ATCGTCCACCAGGTGGTTGTTGCTTGCGGGAGAAACGGAAGGCGTTTTCG GCGGGGACGGGGCTTGCGTTCCTGAGATCTCGCCGGAAAGCCTTTCATCC ATCGAGGGGTCCTTGGGGGGCTCAAGAGGAACGGACGTGACGGGCGGGAT GGCCTCCAAGGTACAGGCAGCAGTAGTGGCAGTTACGGGTCATGGATATT TCCCGCACACGCTGGGGTGCGAGCGGTGATACTTCCATCATATTTGGAGG TACCCATTCATGTGGTGGTGCGTTACAGAGTGCAGGCCCGCTCGTGTAAG AAGCACTTCATGTGAGCACAACGATTGAGCACAGACTGGCGCTCAGCAGT CATAGAGGATGGTTACTGGTGGCTGAGCCCAATTTCGTTTCGCCTTTTGT TTTACCCCTTGAGCACTATGGGCCTCCAGGTCTTGTGAGGATGCTTCTTA TCAGCGGGTCGGCGGTGTACCGTGGTTGTTTGGCGTTGTCCGACGGTATG ACGTCATGATAGAGATGCTGGACTCGCTCTAACCACCGGATTCAGGTGTG ATACCCAGCTGTTGCGTGACTAGTCTGCGTTGCGTGAGTTAATGCAAAGA CATCGCCGCCGCGTCGACCAGGTGCGGGACATGATCTCGCTCGTAGAAAG CCTGCCTGGATCAAGGATCAGAATCTTCTCCGGCCTTAGCCCGGGCGGCA TAAAGCGCACATTGCTGCTGGCGGCCGGGAGGGACGGGCAAGAACCAACG CAAGGCGATAACGGGAGTAGAAGCAAAGGCAGCGGTGGGCCGACGACAGG GGGCCTCGGGACAGTAATCGTAGCGTCTGCCACCACTGCCGCCGACGTTG CACCGGCGGTATCCACAGAAGTTGGTGGCGAAGCGGGCGGGGGTGGGGGA ATCTCGTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1360:5279..8587-

>mRNA_E-fasciculatus_F_contig1360.2678.1 ID=mRNA_E-fasciculatus_F_contig1360.2678.1|Name=mRNA_E-fasciculatus_F_contig1360.2678.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1272bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1360:5279..8587- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGCTTGCAGCCGGCGGCGTCCGCGGTTTGTCGGGGGGGCAGGCTGGT
TTCAATGGCGACGGCACCAATAAAGATGAGCTTGCAGCCGGCGGCGTCCG
CGGTTTGTCGGGGGGGCAGGCTGGTTTCAATGGCGACGGCACCAATAAAG
GCTGCTTTGGAGGCGGGAATTGTGCCGGTTGTTCACGGCGACGTTGCGTT
TGACCAAGAGCTCGGGGGCACCGTGGCATCGACAGAGGAGATCTTTGCTT
TCCTCGCGCGGGAACTGAAGCCACGGCTGCTTTGGAGGCGGGAATTGTGC
CGGTTGTTCACGGCGACGTTGCGTTTGACCAAGAGCTCGGGGGCACCGTG
GCATCGACAGAGGAGATCTTTGCTTTCCTCGCGCGGGAACTGAAGCCACG
GTGGTTGTTGCTTGCGGGAGAAACGGAAGGCGTTTTCGGCGGGGACGGGG
CTTGCGTTCCTGAGATCTCGCCGGAAAGCCTTTCATCCATCGAGGGGTCC
TTGGGGGGCTCAAGAGGAACGGACGTGACGGGCGGGATGGCCTCCAAGGT
GGTTGTTGCTTGCGGGAGAAACGGAAGGCGTTTTCGGCGGGGACGGGGCT
TGCGTTCCTGAGATCTCGCCGGAAAGCCTTTCATCCATCGAGGGGTCCTT
GGGGGGCTCAAGAGGAACGGACGTGACGGGCGGGATGGCCTCCAAGGTGC
GGGACATGATCTCGCTCGTAGAAAGCCTGCCTGGATCAAGGATCAGAATC
TTCTCCGGCCTTAGCCCGGGCGGCATAAAGCGCACATTGCTGCTGGCGGC
CGGGAGGGACGGGCAAGAACCAACGCAAGGCGATAACGGGAGTAGAAGCA
AAGGCAGCGGTGGGCCGACGACAGGGGGCCTCGGGACAGTAATCGTAGCG
TCTGCCACCACTGCCGCCGACGTTGCACCGGCGGTATCCACAGAAGTTGG
TGGCGAAGCGGGCGGGGGTGGGGGAATCTCGTAGGTGCGGGACATGATCT
CGCTCGTAGAAAGCCTGCCTGGATCAAGGATCAGAATCTTCTCCGGCCTT
AGCCCGGGCGGCATAAAGCGCACATTGCTGCTGGCGGCCGGGAGGGACGG
GCAAGAACCAACGCAAGGCGATAACGGGAGTAGAAGCAAAGGCAGCGGTG
GGCCGACGACAGGGGGCCTCGGGACAGTAATCGTAGCGTCTGCCACCACT
GCCGCCGACGTTGCACCGGCGGTATCCACAGAAGTTGGTGGCGAAGCGGG
CGGGGGTGGGGGAATCTCGTAG
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