mRNA_E-fasciculatus_F_contig1360.2678.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A7C3H372_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C3H372_9CHLR) HSP 1 Score: 249 bits (635), Expect = 3.400e-78 Identity = 133/223 (59.64%), Postives = 159/223 (71.30%), Query Frame = 2
Query: 143 QARYRRPSSSGITPTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLLL 811
QAR P R+++GHGSGSFGHVA AK+ T GV A QWRGF +VS AA RLNRLVT ALL AGVPA+SLQP AS VC GR+ ++A PI+AAL +G++PV+HGDVAFD GGT+ STEE+ L L+P WLLLAGETEGV G +P I PE+L +E +LGGSRGTDVTGGMA+KVRDM++LV P RIRIFSGL+P + R L
Sbjct: 36 QARQANPD------LRLVLGHGSGSFGHVAGAKYGTRQGVRTAQQWRGFAEVSAAALRLNRLVTEALLAAGVPAVSLQPCASVVCEDGRITAIAAHPIQAALTSGLLPVIHGDVAFDTVRGGTIVSTEEVMMALVETLRPSWLLLAGETEGVLDLAGQVIPRIMPETLPQVEAALGGSRGTDVTGGMAAKVRDMLALVTEQPAMRIRIFSGLTPDLLPRVLAF 252
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A2E0ZCB3_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZCB3_9CHLR) HSP 1 Score: 235 bits (599), Expect = 2.200e-72 Identity = 126/225 (56.00%), Postives = 161/225 (71.56%), Query Frame = 2
Query: 143 QARYRRPSSSGITPTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLLLAA 817
QAR P+ R+++G GSGSFGHVAAAKH T GV+ A WRGF +VSDAA+RLNR+V + LL GVPA+SL P+AS C GR+ ++A P++AAL AG+VPVV+GDVAFD GGT+ STEE+ L E++P WLLLAGET GV+ + + IS + + IE +LGGSRGTDVTGGMASKV+ M++LV++ P IRIFSGL PG + +TLL A
Sbjct: 63 QARRENPA------LRLVLGQGSGSFGHVAAAKHGTRHGVTDAAGWRGFAEVSDAAARLNRMVVSELLLVGVPAVSLSPSASVGCVDGRIQTIAVQPVQAALAAGLVPVVYGDVAFDSVRGGTIVSTEEVMMALVAEIRPSWLLLAGETTGVYDLEEQVISRISRANYAEIEAALGGSRGTDVTGGMASKVQSMLALVDAFPQLAIRIFSGLEPGNLAQTLLNPA 281
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A0S8AVD4_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Anaerolineae bacterium SG8_19 TaxID=1703386 RepID=A0A0S8AVD4_9CHLR) HSP 1 Score: 234 bits (596), Expect = 2.670e-72 Identity = 126/225 (56.00%), Postives = 157/225 (69.78%), Query Frame = 2
Query: 134 NELQARYRRPSSSGITPTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLL 808
N L + R SS ++++GHGSGSFGHVAA K+ T G+ QW+GF +VS AA+RLN V +LL VPA+SLQP+ASA CR GR+V+M T +KAA+EAG+VP+V+GDVAFD LGGT+ STEEI +FLA +L+P WLLLAGETEGV DG +P I+ ++ I+ L GSRGTDVTGGMASKV M+ LVE P + IFSGL G I LL
Sbjct: 31 NRLVSEIREALSS-KPELQLVLGHGSGSFGHVAANKYGTRQGIHTQDQWKGFAEVSSAAARLNAQVRESLLVKNVPAVSLQPSASAECRKGRIVNMGTTQVKAAIEAGLVPIVYGDVAFDSVLGGTIISTEEILSFLAADLRPTWLLLAGETEGVLSDDGRIIPLITKSNIGQIQNQLSGSRGTDVTGGMASKVNQMLELVEKDPNLSVLIFSGLKGGNISGRLL 254
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A6L3F9Z2_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L3F9Z2_9CHLR) HSP 1 Score: 233 bits (594), Expect = 4.870e-72 Identity = 120/206 (58.25%), Postives = 154/206 (74.76%), Query Frame = 2
Query: 188 RVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTL 805
++++GHGSGSFGHVAAAK+ T GVS +W GF +VS AA+RLNR+V AL +AGVPA++LQP+AS VC GR+ +AT PI+ AL+AG++PVVHGDVAFD GGT+ STEE+ +A L+P WLLLAGET GV +G +P+I+ ESL I +LGGSRGTDVTGGMASKV M+ L++ IRIFSGL+ G ++ TL
Sbjct: 46 KLLMGHGSGSFGHVAAAKYGTRQGVSSPSEWAGFSEVSSAAARLNRIVVDALQEAGVPALTLQPSASVVCENGRIAQIATTPIQHALDAGLLPVVHGDVAFDTVRGGTIISTEEVMMAVAETLQPSWLLLAGETAGVLDQNGTIIPKITRESLPEIASALGGSRGTDVTGGMASKVNSMLQLIDEHSQLNIRIFSGLNEGQLRTTL 251
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A160T015_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Candidatus Promineofilum breve TaxID=1806508 RepID=A0A160T015_9CHLR) HSP 1 Score: 233 bits (593), Expect = 6.890e-72 Identity = 124/207 (59.90%), Postives = 153/207 (73.91%), Query Frame = 2
Query: 188 RVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLL 808
R+++GHGSGSFGHVA A+H T GV G QW GF +V+DAA+RLNR V AALL AGVPA+ L P+ASA+ G + +A API+AAL AG+ PVV GDVAFD GGT+ STEE+ +LA L+P W LLAGETEGV G+G +P I+ +L S +LGGSRGTDVTGGMA+KV M++LVE+ PG IRIFSGL PG + R L+
Sbjct: 46 RLVLGHGSGSFGHVAGARHGTRAGVVGPAQWAGFAEVADAAARLNRHVIAALLAAGVPAVGLPPSASALVSDGYIRELAVAPIQAALAAGVTPVVFGDVAFDAARGGTIISTEEVMDYLAARLRPAWFLLAGETEGVLDGEGNLIPLITASNLPSYLPALGGSRGTDVTGGMAAKVAAMVALVEANPGLAIRIFSGLIPGLLTRLLV 252
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: D8LBJ6_ECTSI (Aspartate/glutamate/uridylate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBJ6_ECTSI) HSP 1 Score: 231 bits (588), Expect = 8.610e-72 Identity = 138/238 (57.98%), Postives = 143/238 (60.08%), Query Frame = 2
Query: 134 NELQARYRRPSSSGITPTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLLLAAGRDGQEPTQG 847
+E R S TRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNR WLLLAGETEGVFGGDGACVPEIS ESL SIEGSLGGSRGTDVTGGMASKVRDMISLVESLPG+RIRIFSGL+PGG+KRTLLLAAGR+GQEPTQG
Sbjct: 11 DETCREIREAISEWDDTTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNR--------------------------------------------------------------------------------WLLLAGETEGVFGGDGACVPEISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGLTPGGVKRTLLLAAGREGQEPTQG 168
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A3B0VP81_9ZZZZ (Isopentenyl phosphate kinase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0VP81_9ZZZZ) HSP 1 Score: 228 bits (580), Expect = 1.100e-69 Identity = 122/224 (54.46%), Postives = 156/224 (69.64%), Query Frame = 2
Query: 146 ARYRRPSSSGITPTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLLLAA 817
A RR + S R+++GHGSGSFGHVAAAKH T GV+ WRGF +V DAA+RLNRL+ ALL AG+PA+SL P+ASAVC+ GR+ + + AAL+AG++PVV+GDVAFD GGT+ STEE+ + L+P WLLLAGET GV+ +P IS + + + LGGSRGTDVTGGMASKV+ M+SL+E P IRIFSGL +++TLL A
Sbjct: 47 AEARRKNGS----LRLLLGHGSGSFGHVAAAKHGTRQGVATPAGWRGFAEVGDAAARLNRLLMTALLAAGLPAVSLPPSASAVCKNGRIQQIGVENVAAALDAGLLPVVYGDVAFDSVRGGTIVSTEEVMMAMVGRLRPSWLLLAGETAGVYDRQQQVIPTISQTNYAEVATVLGGSRGTDVTGGMASKVQGMLSLLEQFPHLSIRIFSGLESNNVRQTLLNPA 266
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A3M1ZMT5_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1ZMT5_9CHLR) HSP 1 Score: 226 bits (577), Expect = 1.710e-69 Identity = 115/205 (56.10%), Postives = 150/205 (73.17%), Query Frame = 2
Query: 191 VIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTL 805
+++GHG GSFGHVAAA++ T GV A QWRGF +VS A +RLN + L+AGVPA+ LQP+ASA+CR G+LV + T + AL+AG+VPVVHGDVAFD+ GGT+ STEE+ FL ++P WLLLAGETEGV +G +P I P++ + I LGGSRGTDVTGGMA+KV+ M++L LPG ++RIFSGL G + + L
Sbjct: 45 LLIGHGGGSFGHVAAARYQTRQGVRTAAQWRGFAEVSAAMNRLNTELINTFLQAGVPAIRLQPSASAMCRDGQLVQLDTTAVLTALQAGLVPVVHGDVAFDEVRGGTIISTEEVMDFLVARIRPFWLLLAGETEGVLDDEGRVIPHIHPDNFAQIAPLLGGSRGTDVTGGMAAKVQAMVALAGRLPGLQVRIFSGLESGVVAQVL 249
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A2G6GE47_9CHLR (Isopentenyl phosphate kinase n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2G6GE47_9CHLR) HSP 1 Score: 223 bits (569), Expect = 2.660e-68 Identity = 123/230 (53.48%), Postives = 154/230 (66.96%), Query Frame = 2
Query: 119 VGRF*NELQARYRRPSSSGITPTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLL 808
+GR E+ A R + R++VGHG GSFGHVAAAK T GV A QW F +V A +RLNRLV ALL AGVPA+SLQP+A +C GR+ + TAP+ AAL AG+VPV++GDVAFD E+GGT+ STEE+ LA L+P WLLLAGE GV G G VP+I+ + I+ +LGGSRGTDVTGGM SKV+ M++LVE IRI +GL G ++ LL
Sbjct: 27 LGRVVKEIAAARRENPA-----LRLVVGHGGGSFGHVAAAKSHTRQGVRTAEQWHDFAEVHAAMARLNRLVVEALLAAGVPALSLQPSAGVLCENGRIKQIETAPMLAALAAGLVPVIYGDVAFDSEIGGTIVSTEEVVMALADALQPTWLLLAGEVPGVLDGQGEVVPKITAVTFDDIKPALGGSRGTDVTGGMTSKVQSMLALVEKQAALSIRILTGLESGVVQGALL 251
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Match: A0A6L9INU9_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L9INU9_9CHLR) HSP 1 Score: 215 bits (548), Expect = 3.720e-65 Identity = 110/210 (52.38%), Postives = 153/210 (72.86%), Query Frame = 2
Query: 188 RVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRLVTAALLKAGVPAMSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVASTEEIFAFLARELKPRWLLLAGETEGVFGGDGACVPEISPESLSSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGSRIRIFSGLSPGGIKRTLLLAA 817
R+++GHGSGSFGH A ++ T++GV +WRGF V+ A+ LN+LV ALL AGVP M +QP+ASAV R G +V MAT P++A L+ G+VP+V+GDVA D+ GGT+ STE +F +LAR + ++L GE +GV+ G +P I+P++L +E +LGGS GTDVTGGMA+KVRDM++LV++ P IRI SGL PG ++ TLL +A
Sbjct: 44 RLLIGHGSGSFGHFVAERYGTVNGVDSPDEWRGFAHVATVAAELNQLVAQALLDAGVPVMRMQPSASAVSRAGVIVRMATEPLQALLDHGVVPLVYGDVALDEVRGGTIISTETVFFYLARHIPADEIMLLGEVDGVYDQAGQVIPSITPQALPQVERALGGSAGTDVTGGMATKVRDMVALVQAEPRLTIRICSGLVPGLLQATLLGSA 253 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1360.2678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1360.2678.1 >prot_E-fasciculatus_F_contig1360.2678.1 ID=prot_E-fasciculatus_F_contig1360.2678.1|Name=mRNA_E-fasciculatus_F_contig1360.2678.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=212bp MSLQPAASAVCRGGRLVSMATAPIKAALEAGIVPVVHGDVAFDQELGGTVback to top mRNA from alignment at E-fasciculatus_F_contig1360:5279..8587- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1360.2678.1 ID=mRNA_E-fasciculatus_F_contig1360.2678.1|Name=mRNA_E-fasciculatus_F_contig1360.2678.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3309bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1360:5279..8587- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1360:5279..8587- >mRNA_E-fasciculatus_F_contig1360.2678.1 ID=mRNA_E-fasciculatus_F_contig1360.2678.1|Name=mRNA_E-fasciculatus_F_contig1360.2678.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1272bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1360:5279..8587- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |