mRNA_E-fasciculatus_F_contig1357.2656.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1357.2656.1 vs. uniprot
Match: D7FS74_ECTSI (Ribonuclease Z n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS74_ECTSI) HSP 1 Score: 1369 bits (3543), Expect = 0.000e+0 Identity = 801/982 (81.57%), Postives = 824/982 (83.91%), Query Frame = 1
Query: 61 MKNEDLIQSYCQVVGTGDDGSSPCLIVSVEKAPRYNGGEPTENKILRRYLFNVGEGTQRFCGEAGVKLAKVNKLFLTGTGAEEHAGLSGLILTLSALGSPALEVFGPTGVDKLVEGLQAFGPRVGKCPAVSPMPLPLGTGESQCSYVLGDEHMEVRCGLVDPARAQSSKDVVTVDSSSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGDERVPKSAAATNTLTPAPRGEKRAVANGGGANANPGAGHLKGARAARHPGIPAGIPARGPAVLYRCRVLHGDGSTFLVLSCPNVAYIPAVRDHAIVRGARGKDSVLFVFHLSPEDVVDDAAYAPLLALKGTHVLLGCGREGRGRGAGGLQHRKLAERSVQLNFVAPQAFPLHSALLNTAGHEGADSVSSCEEVGAGGSRAVVGHTLTKAMLLPVAARGINLSAVRPPVEVAEIWEDMEQRVEEAGLRDERDGIVARLWRAHGLIRESGLPSXXXXXXXXXXXFLNLGGEDGDEDDCDADNTMRSKSGASASGSGGQPTRLSSFLPXXXXXXXLYSGCGPPGKRARTGNGSRLPASHHPSRGPGPXXXXXXXXXXXQAPLFSGGGLAGAEVFFLGTGSAAPTKNRGCSGILIRIPQAGLVGHNDRAAEGAPLRLLIDAGEGTLGHFERQFGPEGALREIRGLDCVWISHKHADHHTGLFRLIVEHHRARQASRLAGAGPRETAAPLVVVAPSAVLTFVKACKEFSGEDVSYQAMHCKNLERAWGWRGGSGTRTGSSGSG--GSRRGASMLLSGMRSVPVIHCREAYGLVLQLWEDGAKLVYSGDTRPCDRLVRAGTGAALLIHEATFDDSMQQDAVSKFHCTTSEALEVGRRMRAGEVVLTHFSQRYPRVPVLDTERAQQFCVAFDGMVLSGNTVGVLPAAANLLSQVLEPKDEDGDDAKEEIVPS 3000
MK EDLI SYCQV+GTGDDGSSPCLIVSVEKAPRY+GGEPTENKILRRYLFNVGEGTQRFCGEAGVKLAKVNKLFLTGTGAEEHAGLSGLILTLSALGSPALEVFGPTGVD LV GLQAFGPRVG+CPAVSPMPLPLG GESQCSYVLGDEHMEVRCG+VDPAR+QSSK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DG D +LTPAPRGE +A ANG GA ANPGAGH KGARA RHP IPAGIPARGPAVLYRCRVLHG+GSTFLVLSCPNVAY+PAVRDHAIVRGARGKDSVLFVFHLSPEDVVD AAYAPLLALKGTHVLLGCGREGR RGAGGLQHRKLAERSVQLNFVAPQAFPLHSAL+NTAGH+GADSVSSCEE+G GGSR VVGHTLTKAMLLPVAARGINLSAVRPPVEVAEIWEDMEQRVEEAGLRDERD +VARLWRAHGL+R+SG PS LNLGGEDGDE+D DAD TMR++ GAS GL GAEVFFLGTGSAAPTKNRGCSGIL+RIPQAGLVGHN AAEGAPLRLLIDAGEGTLGHFERQFG EGALREIRGLDCVWISHKHADHHTGLFRLI EHHRARQASR AG GPRE AAPLVVVAPSAVLTFVKACKEFSGED+SYQAM CK+LERAW WRGGSGTR G S SG GSRRG S LLSGMRSV VIHCREAYGLV+QLWEDGAKLVYSGDTRPCDRLVRAGTGAALLIHEATFDDSMQQDAVSKFHCTTSEALEVGRRMRAGEVVLTHFSQRYPRVPVLDTERAQ FCVAFDGMVL+GNTVGVLPAAANLLSQVLEPK EDGDD KEEIVPS
Sbjct: 1 MKTEDLIHSYCQVIGTGDDGSSPCLIVSVEKAPRYSGGEPTENKILRRYLFNVGEGTQRFCGEAGVKLAKVNKLFLTGTGAEEHAGLSGLILTLSALGSPALEVFGPTGVDTLVAGLQAFGPRVGRCPAVSPMPLPLGPGESQCSYVLGDEHMEVRCGVVDPARSQSSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVSNKRRADGAD-----------SLTPAPRGENKATANGDGAIANPGAGHPKGARADRHPEIPAGIPARGPAVLYRCRVLHGEGSTFLVLSCPNVAYVPAVRDHAIVRGARGKDSVLFVFHLSPEDVVDSAAYAPLLALKGTHVLLGCGREGRRRGAGGLQHRKLAERSVQLNFVAPQAFPLHSALVNTAGHDGADSVSSCEEIGTGGSRTVVGHTLTKAMLLPVAARGINLSAVRPPVEVAEIWEDMEQRVEEAGLRDERDVVVARLWRAHGLMRKSGPPSGLTRESGLPNECLNLGGEDGDEEDYDADATMRNEPGASG--------------------------------------------------------------------XXXXXGLGGAEVFFLGTGSAAPTKNRGCSGILVRIPQAGLVGHNGLAAEGAPLRLLIDAGEGTLGHFERQFGREGALREIRGLDCVWISHKHADHHTGLFRLIAEHHRARQASRPAGGGPREAAAPLVVVAPSAVLTFVKACKEFSGEDISYQAMRCKDLERAWHWRGGSGTRAGPSPSGRRGSRRGVSALLSGMRSVSVIHCREAYGLVVQLWEDGAKLVYSGDTRPCDRLVRAGTGAALLIHEATFDDSMQQDAVSKFHCTTSEALEVGRRMRAGEVVLTHFSQRYPRVPVLDTERAQHFCVAFDGMVLNGNTVGVLPAAANLLSQVLEPKAEDGDDGKEEIVPS 903
BLAST of mRNA_E-fasciculatus_F_contig1357.2656.1 vs. uniprot
Match: A9RE01_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RE01_PHYPA) HSP 1 Score: 202 bits (513), Expect = 2.370e-54 Identity = 128/315 (40.63%), Postives = 171/315 (54.29%), Query Frame = 1
Query: 2005 FLGTGSAAPTKNRGCSGILIRIPQAGLVGHNDRAAEGAPLRLLIDAGEGTLGHFERQFGPEGALREIRGLDCVWISHKHADHHTGLFRLIVEHHRARQASRLAGAGPRETAAPLVVVAPSAVLTFVKACKEFSGEDVS-----------YQAMHCKNLERAWGWRGGSGTRTGSSGSGGSRRG------ASMLLSGMRSVPVIHCREAYGLVLQLWEDGAKLVYSGDTRPCDRLVRAGTGAALLIHEATFDDSMQQDAVSKFHCTTSEALEVGRRMRAGEVVLTHFSQRYPRVPVLDTERAQQFCVAFDGMVLSG 2898
FLGTGSA P+K RG S IL++ EG +L+DAGEG++G R+FG G +R L CVW+SHKHADH G+ +I + P E A L ++ PSAV ++ + VS +Q +HC G +R +G+ G+ ++ L G+RS+ V HC EAYGLV+ G +VYSGDTRPC RL++AG G +LLIHEATF+D++ A+ K H T EA++VG +MRA VVLTHFSQRYP+ LD R + C AFDGMV+ G
Sbjct: 1 FLGTGSAEPSKFRGSSAILLQT-------------EGKH-SMLLDAGEGSIGQLRRKFGSAGVDEVLRSLQCVWLSHKHADHVLGMLSIIHAY-------------PTE-APKLTIIGPSAVKRWISEVFFCDSQAVSLWADMGYNFRPFQFLHCNAFSE------GIFSRPAGNGALGNAEQDTQGFLKNLALLGLRSIYVDHCHEAYGLVIH-GHSGWSIVYSGDTRPCHRLIQAGGGCSLLIHEATFEDNLSDHAIRKRHSTVLEAIDVGLQMRAQFVVLTHFSQRYPQAVTLDASRYKNVCTAFDGMVVRG 280
BLAST of mRNA_E-fasciculatus_F_contig1357.2656.1 vs. uniprot
Match: K3WRS3_GLOUD (Lactamase_B domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRS3_GLOUD) HSP 1 Score: 202 bits (513), Expect = 3.170e-54 Identity = 127/298 (42.62%), Postives = 175/298 (58.72%), Query Frame = 1
Query: 1996 EVFFLGTGSAAPTKNRGCSGILIRI-----PQAGLVGHNDRAAEGAPLRLLIDAGEGTLGHFERQFGPEGALREIRGLDCVWISHKHADHHTGLFRLIVEH---HRARQASRLAGAGPRETAAPLVVVAPSAVLTF--------VKACKEFSGEDVSYQAMH-CKNLERAWG-WRGGSGTRTGSSGSGGSRRGASMLLSGMRSVPVIHCREAYGLVLQLWEDGAKLVYSGDTRPCDRLVRAGTGAALLIHEATFDDSMQQDAVSKFHCTTSEALEVGRRMRAGEVVLTHFSQRYPRVP 2835
++ LGTGSAAP++ RG +GI + + P A H D + +LID GEGT G RQFG A R I GL C+WISH HADH GL R++ E+ H +R ++ G L+++ P +VL++ + AC S S+ C++ + +R + G+ ++ +RSVPV HC ++YGLVLQL ++G K+VYSGDTRPC++LV AG A+LLIHEATFDDSM++DAV K H T EAL + R+MRA EV+LTHFSQRYP++P
Sbjct: 2 KLIILGTGSAAPSRLRGSTGIYLELKSKAAPVAVPSDHGDMPTDS----MLIDCGEGTYGQLWRQFGDATAAR-IGGLRCIWISHSHADHQCGLVRILYEYVCFHTSRGLNQRQG---------LLIIGPESVLSYANSWVEHIMSACGVESSRRASFFGFATCRDFNQYHHPFRAQLFSHIGA------------VVREIRSVPVWHCYDSYGLVLQL-QNGQKIVYSGDTRPCNQLVTAGMDASLLIHEATFDDSMEEDAVKKKHSTVGEALTIARQMRATEVILTHFSQRYPKLP 272
BLAST of mRNA_E-fasciculatus_F_contig1357.2656.1 vs. uniprot
Match: A0A662Y5Q3_9STRA (Lactamase_B domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y5Q3_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.140e-53 Identity = 133/312 (42.63%), Postives = 174/312 (55.77%), Query Frame = 1
Query: 2008 LGTGSAAPTKNRGCSGILIRIPQAGLVGHNDRAAEGAPLRLLIDAGEGTLGHFERQFGPEGALREIRGLDCVWISHKHADHHTGLFRLIVEHHRARQASRLAGAGPRETAAPLVVVAPSAVLTFVKA-CKEFSGEDVS---YQAMHCKNLERAWGWRGGSGTRTGSSGSGGSRRGASMLLSGMR-------SVPVIHCREAYGLVLQLWEDGAKLVYSGDTRPCDRLVRAGTGAALLIHEATFDDSMQQDAVSKFHCTTSEALEVGRRMRAGEVVLTHFSQRYPRVPVLDTERAQQFCVAFDGMVLSGNTVG 2910
LGTGSAAP+K R SG+ + + +G AAE A +L+D GEGT G RQFG E R I GL C+WISH HADHH GL R++ E+ R +T PL+VV P +VL++VK+ EF G+ + +Q C R+ LLS + SVPV HC ++YGLVL L + G KLVYSGDT+PC++LV AG AALL+HEATFDD+M+QDA K H T +A+++ RRM+A ++VLTHFSQRYP +P T + DG+ N G
Sbjct: 130 LGTGSAAPSKLRASSGMYLELSGSG-------AAEVAS--MLVDCGEGTYGQLWRQFGREVTQR-IGGLRCIWISHNHADHHCGLVRVLYEYWRFHTHH-----SDGKTPPPLIVVGPQSVLSYVKSWLPEFGGKMPTSQLFQLATCSEFNRS------------------DHPLRRQLLSDIGFAVTSIISVPVFHCYDSYGLVLTL-QGGKKLVYSGDTKPCNQLVVAGMNAALLVHEATFDDTMEQDARLKKHSTVGQAMDIARRMKAQQLVLTHFSQRYPALPPPVTTSSSS-----DGITTGANPSG 402
BLAST of mRNA_E-fasciculatus_F_contig1357.2656.1 vs. uniprot
Match: UPI000D1C3D68 (tRNAse Z TRZ4, mitochondrial-like isoform X2 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C3D68) HSP 1 Score: 208 bits (530), Expect = 1.180e-53 Identity = 134/326 (41.10%), Postives = 178/326 (54.60%), Query Frame = 1
Query: 1996 EVFFLGTGSAAPTKNRGCSGILIRIPQAGLVGHNDRAAEGAPLRLLIDAGEGTLGHFERQFGPEGALREIRGLDCVWISHKHADHHTGLFRLIVEHHRARQASRLAGAGPRETAAPLVVVAPSAV---LTFVKACKEFSGEDV-SYQAMHCKNLERAWGWRGGSGTRTGSSGSGGSRRGASMLLSGMRSVPVIHCREAYGLVLQLWEDGAKLVYSGDTRPCDRLVRAGTGAALLIHEATFDDSMQQDAVSKFHCTTSEALEVGRRMRAGEVVLTHFSQRYPRVPVLDTERAQQFCVAFDGMVLSGNTVGVLPAAANLLSQVLEPKD 2961
EV F GTGSA P+K RG SG+L+R+ + +L+DAGEG LG R +G AL + ++C+W+SHKHADH G ++ RAR PL+V+ +AV LT V SG + ++ MH E GS G R ++ L + SVPV HC EAYGLVL + G LVYSGDTRP DRL++AG G LLIHEATF+D ++ A K H T SEAL+VG RM+A +V+LTHFSQRYP+V +D CVAFDGMV++ +++ L ++ VL +D
Sbjct: 263 EVQFFGTGSAEPSKYRGSSGVLLRLRGSAA--------------MLLDAGEGVLGQIFRSYGEAKALEAVNSIECLWLSHKHADHVLGAVAIVCSQARARTK-------------PLLVIGSTAVVKWLTEVGNAHAQSGFPLPAFVVMHFAEFE-------------GSHHLG--RVLETLQLKSIASVPVNHCYEAYGLVLH-GQTGWHLVYSGDTRPSDRLIQAGAGCTLLIHEATFEDCLESHARKKRHSTVSEALQVGSRMQAEQVILTHFSQRYPKVVEIDVTSYPNACVAFDGMVVTSSSMRGLRELQGVVRMVLAAQD 545
BLAST of mRNA_E-fasciculatus_F_contig1357.2656.1 vs. uniprot
Match: A0A2D4BGR7_PYTIN (Zinc phosphodiesterase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGR7_PYTIN) HSP 1 Score: 207 bits (527), Expect = 1.330e-53 Identity = 133/304 (43.75%), Postives = 164/304 (53.95%), Query Frame = 1
Query: 1996 EVFFLGTGSAAPTKNRGCSGILIRIPQAGLVGHNDRAAEGAPLRLLIDAGEGTLGHFERQF-GPEGALREIRGLDCVWISHKHADHHTGLFRLIVEHHRARQASRLAGAGPRETAAPLVVVAPSAVLTFVKACKEFSGEDVSYQAMHCKNLERAWGWRGGSGTRTGSSGSGGSRRGASMLLSGMRSVPVIHCREAYGLVLQLWEDGAKLVYSGDTRPCDRLVRAGTGAALLIHEATFDDSMQQDAVSKFHCTTSEALEVGRRMRAGEVVLTHFSQRYPRVPVL---DTERAQQFCVAFDGMVLS 2895
+V LGTGSAAP+K R S I + + N R E A +L+D GEG G RQF E ++ L C+WISH HADH GL R++ E R R+ + L V+AP+ VLT+V F G + C + R R +S RSV V HC +A+GLV +L DG +LVYSGDT+PCD+LVRAG A LLIHEATFDD+M+ DA K H T S+AL V RRMRA +VVLTHFSQRYP +P DT C AFDG+VLS
Sbjct: 254 KVMILGTGSAAPSKLRASSAIYVELT----TDTNSRRTEHAVPAMLLDCGEGAYGQLVRQFDSTEAVATRLQALRCIWISHHHADHQCGLVRVLEEFLRVREDNEL------------FVIAPNCVLTYVTTW--FPGLPQGVRLATCDEINDHSSPRRHEFLRH-----------MRAFVSEWRSVRVWHCHDAFGLVCRL-VDGRRLVYSGDTKPCDQLVRAGMDATLLIHEATFDDTMEDDAERKKHSTVSQALGVARRMRAQQVVLTHFSQRYPSLPPTVSADTSSGAVVCCAFDGLVLS 527
BLAST of mRNA_E-fasciculatus_F_contig1357.2656.1 vs. uniprot
Match: D8RZL7_SELML (Lactamase_B domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RZL7_SELML) HSP 1 Score: 211 bits (537), Expect = 1.510e-53 Identity = 136/326 (41.72%), Postives = 181/326 (55.52%), Query Frame = 1
Query: 1996 EVFFLGTGSAAPTKNRGCSGILIRIPQAGLVGHNDRAAEGAPLRLLIDAGEGTLGHFERQFGPEGALREIRGLDCVWISHKHADHHTGLFRLIVEHHRARQASRLAGAGPRETAAPLVVVAPSAV---LTFVKACKEFSGEDV-SYQAMHCKNLERAWGWRGGSGTRTGSSGSGGSRRGASMLLSGMRSVPVIHCREAYGLVLQLWEDGAKLVYSGDTRPCDRLVRAGTGAALLIHEATFDDSMQQDAVSKFHCTTSEALEVGRRMRAGEVVLTHFSQRYPRVPVLDTERAQQFCVAFDGMVLSGNTVGVLPAAANLLSQVLEPKD 2961
EV F GTGSA P+K RG SG+L+R+ + +L+DAGEG LG R +G AL + ++C+W+SHKHADH G ++ QA RE PL+V+ +AV LT V SG + ++ MH + E GS G R ++ L + SVPV HC EAYGLVL + G LVYSGDTRP DRL++AG G LLIHEATF+D ++ A K HCT SEAL+VG RM+A +V+LTHFSQRYP+V +D CVAFDGMV++ +++ L ++ VL +D
Sbjct: 406 EVQFFGTGSAEPSKYRGSSGVLLRLRGSAA--------------MLLDAGEGVLGQIFRSYGEAKALEAVNSIECLWLSHKHADHVLGAVAIVCS-----QA--------RERTKPLLVIGSTAVVKWLTEVCNAHAQSGFPLPAFVVMHFEEFE-------------GSHHLG--RVLETLQLKSIASVPVNHCYEAYGLVLH-GQTGWHLVYSGDTRPSDRLIQAGAGCTLLIHEATFEDCLESHARKKRHCTVSEALQVGSRMQAEQVILTHFSQRYPKVVEIDVTSYPNACVAFDGMVVTSSSMRGLRELQGVVRMVLAAQD 688
BLAST of mRNA_E-fasciculatus_F_contig1357.2656.1 vs. uniprot
Match: A0A5D6XTC9_9STRA (Ribonuclease Z n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTC9_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.770e-53 Identity = 136/307 (44.30%), Postives = 172/307 (56.03%), Query Frame = 1
Query: 1996 EVFFLGTGSAAPTKNRGCSGILIRIPQA-----GLVGHNDRAAEGAPLRLLIDAGEGTLGHFERQFGPEGALREIRGLDCVWISHKHADHHTGLFRLIVEHHRARQASRLAGAGPRETAAPLVVVAPSAVLTFVKA----------------------CKEFSGEDVSYQAMHCKNLERAWGWRGGSGTRTGSSGSGGSRRGASMLLSGMRSVPVIHCREAYGLVLQLWEDGAKLVYSGDTRPCDRLVRAGTGAALLIHEATFDDSMQQDAVSKFHCTTSEALEVGRRMRAGEVVLTHFSQRYPRVP 2835
++ LGTGSAAP+K RG + + + P A LVG +A P +LID GEGT G RQFG E A R I L CVWISH HADH GL R++ E R + A P + A PLVV+AP +V+++ ++ C+EF+ +A +E +++ + SVPV HC ++YGLVL+L DG K+VYSGDTRPCD LV AGT AALLIHEATFDD++ DAVSK H T EALEV R+MRA EVVLTHFSQRYP++P
Sbjct: 634 KLVVLGTGSAAPSKLRGSTAMYLEFPGARSPPTSLVG--TESARRTPDAMLIDCGEGTFGQLWRQFGDETAAR-IGALSCVWISHSHADHQCGLIRVLSEFVRYHASV----AAPLDHA-PLVVIAPLSVISYARSWMRQIADSDGAAGRTVRVAFATCREFNDRRHPLRAALLARIET--------------------------VVAQLSSVPVHHCYDSYGLVLEL-RDGRKVVYSGDTRPCDALVAAGTPAALLIHEATFDDALASDAVSKRHSTVGEALEVARQMRAREVVLTHFSQRYPKLP 905
BLAST of mRNA_E-fasciculatus_F_contig1357.2656.1 vs. uniprot
Match: A0A0H5QW55_9EUKA (Ribonuclease Z n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QW55_9EUKA) HSP 1 Score: 209 bits (531), Expect = 3.590e-53 Identity = 124/311 (39.87%), Postives = 171/311 (54.98%), Query Frame = 1
Query: 2005 FLGTGSAAPTKNRGCSGILIRIPQAGLVGHNDRAAEGAPLRLLIDAGEGTLGHFERQFGPEGALREIRGLDCVWISHKHADHHTGLFRLIVEHHRARQASRLAGAGPRETAAPLVVVAPSAVLTFVKACKEFSGEDVSYQAMHCKNLERAWGWRGGSGTRTGSSGSGGSRRGASMLLSG-----MRSVPVIHCREAYGLVLQLWEDGAKLVYSGDTRPCDRLVRAGTGAALLIHEATFDDSMQQDAVSKFHCTTSEALEVGRRMRAGEVVLTHFSQRYPRVPVLDTERAQQFCVAFDGMVLSGNTVGVLPA 2922
FLGTG+AAP+K R S I + IP G+ RLLID GEG LG R + + L VWISHKHADHH GL ++ R+R+ + TA + V+APS VL ++++ + +D+ + C++ AS +LS ++SVPV+HC ++GLVL DG + VYSGDTRPC L+ AG+ A +L+HEATF+D +Q +A+ K HCTT EAL+VGR+M A E +LTHFSQRYP++P T A CVAFD M + + +LP+
Sbjct: 393 FLGTGAAAPSKYRSSSAIDLLIPSYGV-------------RLLIDCGEGALGQMHRIIPEKEFPSYMASLRVVWISHKHADHHVGLLNVL----RSRR---------QHTANDVTVIAPSTVLEWMRSFVANADDDIRCHLVDCRDAL------------------------ASTILSPFGITCLQSVPVLHCSNSFGLVLDHC-DGWRFVYSGDTRPCQALIDAGSNATVLVHEATFEDDLQDEAILKKHCTTKEALDVGRQMNAAETILTHFSQRYPKIPTATTVAAASSCVAFDLMRIQFGRLAILPS 652
BLAST of mRNA_E-fasciculatus_F_contig1357.2656.1 vs. uniprot
Match: A0A7S2WA18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WA18_9STRA) HSP 1 Score: 202 bits (515), Expect = 9.100e-53 Identity = 134/332 (40.36%), Postives = 185/332 (55.72%), Query Frame = 1
Query: 1981 GLAGAEVFFLGTGSAAPTKNRGCSGILIRIPQAGLVGHNDRAAEGAPLRLLIDAGEGTLGHFERQFGPEGALREIRGLDCVWISHKHADHHTGLFRLIVEHHRARQASRLAGAGPRETAAPLVVVAPSAVLTFVKACKEFSGEDV-SYQAMHCKNLERAWGWRGGSGTRTGSSGSGGSRRGASMLLSGMRSVPVIHCREAYGLVLQLWEDGAKLVYSGDTRPCDRLVRAGTGAALLIHEATFDDSMQQDAVSKFHCTTSEALEVGRRMRAGEVVLTHFSQRYPRVPVLDTERAQQFCVAFDGMVLSGNTVGVLPAAANLLSQVLEPKDEDGD 2973
G AGA V FLGTGSA P+K+R S I + +P+A EG +L+D GEGTLG R +G ++ GL +WISH HADHH GL ++ R +A R G RE LV+VAP +V +++ ++ V SYQ + C+ L R + + A + L + +V V HCR+++G + + E G KLVYSGD RP D LV AG GA LLIHEATF+DSM DAV+K HCT SEA+ V RM A +LTHFSQRYP +P L ++ + + VA D M +S + A+ +L +L P+ ++ +
Sbjct: 125 GAAGARVSFLGTGSAIPSKHRNTSAIHVEVPRA----------EGVSRGMLLDVGEGTLGQMHRLWGAGATTDKLLGLSLIWISHPHADHHLGLIDILAARRRLVKAHRGGGGPFRER---LVLVAPRSVALWLEGYEKLDPCCVGSYQMILCETLLPMMAPRLSTTAAPAENSPPLVLALADLGLVCVSNVRVPHCRDSFGGIFES-ESGWKLVYSGDCRPSDSLVAAGQGATLLIHEATFEDSMADDAVAKRHCTISEAVGVAVRMNATRCILTHFSQRYPALPNLPSDVSGKVLVACDMMSVSFRDLLWASASVPVLRCLLPPEADESE 442 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1357.2656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1357.2656.1 >prot_E-fasciculatus_F_contig1357.2656.1 ID=prot_E-fasciculatus_F_contig1357.2656.1|Name=mRNA_E-fasciculatus_F_contig1357.2656.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=981bp MKNEDLIQSYCQVVGTGDDGSSPCLIVSVEKAPRYNGGEPTENKILRRYLback to top mRNA from alignment at E-fasciculatus_F_contig1357:7436..12235- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1357.2656.1 ID=mRNA_E-fasciculatus_F_contig1357.2656.1|Name=mRNA_E-fasciculatus_F_contig1357.2656.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4800bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1357:7436..12235- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1357:7436..12235- >mRNA_E-fasciculatus_F_contig1357.2656.1 ID=mRNA_E-fasciculatus_F_contig1357.2656.1|Name=mRNA_E-fasciculatus_F_contig1357.2656.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=5886bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1357:7436..12235- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |