prot_E-fasciculatus_F_contig1356.2649.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1356.2649.1
Unique Nameprot_E-fasciculatus_F_contig1356.2649.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length212
Homology
BLAST of mRNA_E-fasciculatus_F_contig1356.2649.1 vs. uniprot
Match: D7G2F8_ECTSI (DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F8_ECTSI)

HSP 1 Score: 396 bits (1018), Expect = 6.510e-136
Identity = 198/212 (93.40%), Postives = 203/212 (95.75%), Query Frame = 0
Query:    1 MAVKGGFGARNPDVGKKRHTFHCQLTTNSRGHAANSEAANMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGTQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGKMHRLDGLEADPKLKCLKLFQEISWVGAVKAHQLYDKGMRSIEDLRTKGLHLLSEQAQICLNSRHEDITQRMPRSEAAEIEGVVTKVAQSMCPGVICQA 212
            MAVKGGFGARNPDVGKKRHTFHCQ TT SRGHAANSEAANMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLG QITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEG+MHRLDGLEADPKLKCLK+ QE+ WVGAVKA QLYDKG+RSIEDLRTKGLHLLSEQAQICL SRHEDI QRMPRSEAAEIE VVTKVAQS+CPGVICQA
Sbjct:    1 MAVKGGFGARNPDVGKKRHTFHCQSTTTSRGHAANSEAANMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKLKCLKILQEVGWVGAVKAQQLYDKGVRSIEDLRTKGLHLLSEQAQICL-SRHEDIMQRMPRSEAAEIEAVVTKVAQSICPGVICQA 211          
BLAST of mRNA_E-fasciculatus_F_contig1356.2649.1 vs. uniprot
Match: A0A6H5JHQ3_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ3_9PHAE)

HSP 1 Score: 380 bits (977), Expect = 5.680e-124
Identity = 188/207 (90.82%), Postives = 199/207 (96.14%), Query Frame = 0
Query:    1 MAVKGGFGARNPDVGKKRHTFHCQLTTNSRGHAANSEAANMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGTQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGKMHRLDGLEADPKLKCLKLFQEISWVGAVKAHQLYDKGMRSIEDLRTKGLHLLSEQAQICLNSRHEDITQRMPRSEAAEIEGVVTKVAQSMCPG 207
            MAVKGGFGARNPDVGKKRHTFHCQ TTNSRGHA NSEAA+MLEDLAKLCAVRGGDGSVFKERGFKNAAGVL+RLG QITNIQQLKDLRKHEPQRVRGLGDSVMKEL+TFYEEG+M+RLD LEADPKLKCLK+FQE+ WVGAVKA QLYD+G+RSIEDLRTKGLHLLSEQAQICLN RHEDITQRMPRSEAAEIE VVT+VAQS+CPG
Sbjct:  477 MAVKGGFGARNPDVGKKRHTFHCQSTTNSRGHAVNSEAADMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLKRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELATFYEEGRMYRLDELEADPKLKCLKIFQEVGWVGAVKAQQLYDQGIRSIEDLRTKGLHLLSEQAQICLN-RHEDITQRMPRSEAAEIEAVVTRVAQSICPG 682          
BLAST of mRNA_E-fasciculatus_F_contig1356.2649.1 vs. uniprot
Match: D7G2F7_ECTSI (DNA polymerase lambda n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F7_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 2.360e-76
Identity = 139/215 (64.65%), Postives = 162/215 (75.35%), Query Frame = 0
Query:    1 MAVKGGFGARNPDVGKKRHTFHCQLTTNSRGHAANSEAANMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGTQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGK-MHRLDGLEADPKLK--CLKLFQEISWVGAVKAHQLYDKGMRSIEDLRTKGLHLLSEQAQICLNSRHEDITQRMPRSEAAEIEGVVTKVAQSMCPGVICQA 212
            M ++G  GAR P+V  +R     Q ++     + N EAA+ML+ LA+LCA RGGDGSVF ERGFK+AA  LR LGTQIT+I+QLKDLRK++P+RVRG+GD  MKEL+ F  EGK   R     ADP     CLKLFQE+ WVGAVKA QLYDKGMRSIEDLRT G  LL+EQ ++CLN RHEDI QRMPRSEAAEIE  VTKVAQS+CPGVICQA
Sbjct:  258 MNLEGEVGARKPNVDMRR-VSQGQPSSFWGPQSPNKEAADMLDGLAELCATRGGDGSVFNERGFKSAAAALRMLGTQITDIEQLKDLRKNDPERVRGVGDGAMKELTAFLAEGKGKSRAPVSGADPPAPEACLKLFQEVGWVGAVKARQLYDKGMRSIEDLRTSGRDLLTEQMRVCLN-RHEDIKQRMPRSEAAEIEAAVTKVAQSICPGVICQA 470          
BLAST of mRNA_E-fasciculatus_F_contig1356.2649.1 vs. uniprot
Match: A0A6H5JQ91_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ91_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 3.710e-47
Identity = 97/161 (60.25%), Postives = 110/161 (68.32%), Query Frame = 0
Query:   54 GDGSVFKERGFKNAAGVLRRLGTQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGKMHRLDGLEADPKL--KCLKLFQEISWVGAVKAHQLYDKGMRSIEDLRTKGLHLLSEQAQICLNSRHEDITQRMPRSEAAEIEGVVTKVAQSMCPGVICQA 212
            GDGSVF ERGFK+AA  LR LGTQIT+I+QLK+  +   +               F    +  R    E DP     CLKLFQE+ WVGAVK  QLYDKGMRSIE+LRT+G HLL+EQ + CLN RHEDI  RMPRSEAAEIE  VTKVAQS+CPGVICQA
Sbjct:  285 GDGSVFNERGFKSAAATLRMLGTQITDIEQLKETSERGSR--------------PFLPRARARRSPVSEVDPPTVEACLKLFQEVGWVGAVKTQQLYDKGMRSIENLRTRGRHLLTEQVRFCLN-RHEDIKPRMPRSEAAEIEAAVTKVAQSICPGVICQA 430          
BLAST of mRNA_E-fasciculatus_F_contig1356.2649.1 vs. uniprot
Match: A0A077ZZ96_STYLE (DNA polymerase n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A077ZZ96_STYLE)

HSP 1 Score: 85.9 bits (211), Expect = 6.570e-16
Identity = 56/169 (33.14%), Postives = 92/169 (54.44%), Query Frame = 0
Query:   35 NSEAANMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGTQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGKMHRLDGLEADPKLKCLKLFQEISWVGAVKAHQLYDKGMRSIEDLRTKGLHLLSEQAQICLNSRHEDITQRMPRSEAAEIEGVVTKVAQS 203
            N+E A+ L+ L K    +G  G +F   G+K A   L+     I NI Q+         +V  +GD + K++  F ++G + R + ++ D K   LKL + +  +G   A +LYDK +R+IEDLR K  HLL++  +I L   HED  +++PR E   +E ++ +V Q+
Sbjct:  215 NNEIADQLDRLLKYYTTQGDRGRMF---GYKRALTSLKLFNEPIYNIDQI--------DKVPNIGDGIRKKIKEFIDDGIIKRFEFIDTDEKHNTLKLIESVWGIGPKNAQKLYDKKIRTIEDLR-KNQHLLTDMQKIGLKY-HEDFIEKIPRKE---VEQLLERVKQT 367          
BLAST of mRNA_E-fasciculatus_F_contig1356.2649.1 vs. uniprot
Match: J9HWK2_9SPIT (DNA polymerase n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HWK2_9SPIT)

HSP 1 Score: 83.6 bits (205), Expect = 3.340e-15
Identity = 60/197 (30.46%), Postives = 99/197 (50.25%), Query Frame = 0
Query:   10 RNPDVGKKRHTFHCQLTTNSRGHAANSEAANMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGTQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGKMHRLDGLEADPKLKCLKLFQEISWVGAVKAHQLYDKGMRSIEDLRTKGLHLLSEQAQICLNSRHEDITQRMPRSEAAEIEGVVTKVAQSMCP 206
            +N D GKKR                N+E A  L+ L K        G ++   G+K A   +R +   I ++ QLKD        V  +G+ ++K+L  +  EG + R + ++ D K+K L+LF+++  +G  KA +L+DK MRSIEDLR     LL+   +I L    ED  +++PR E  ++   V +++  + P
Sbjct:  100 QNGDSGKKR--------------PLNNEIAEQLDRLFKYYQTLKDKGRMW---GYKRAVTQVRSIKEPIYSLDQLKD--------VPNIGEGILKKLREYVAEGSIKRFEFIDTDEKIKTLQLFEQVWGIGPSKAQELWDKKMRSIEDLRNHQ-SLLTSMQKIGLKY-FEDFNEKIPREEVTKLLEKVREISYKVIP 269          
BLAST of mRNA_E-fasciculatus_F_contig1356.2649.1 vs. uniprot
Match: A0A251R3K5_PRUPE (DNA polymerase n=2 Tax=Prunus persica TaxID=3760 RepID=A0A251R3K5_PRUPE)

HSP 1 Score: 82.4 bits (202), Expect = 7.610e-15
Identity = 51/170 (30.00%), Postives = 91/170 (53.53%), Query Frame = 0
Query:   40 NMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGTQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGKMHRLDGLEADPKLKCLKLFQEISWVGAVKAHQLYDKGMRSIEDLRTKGLHLLSEQAQICLNSRHEDITQRMPRSEAAEIEGVVTKVAQSMCPGVI 209
            N+ +   KL  +    G   +   +  A  V+ +L  +I ++ Q+KDL          +G S+   +      GK+ +L+  E D K++ L LF+EI  VG   A +LY+KG R+++DL+ +     S++  +     ++DI QR+PR EA E+E ++ KV +++ PGV+
Sbjct:  174 NITQIFGKLINIYRALGDDRRSFSYYKAVPVIEKLPFKIQSVDQVKDLPN--------IGKSMQDHIQEIVTTGKLSKLEHFETDEKVRTLALFEEIWGVGPATALKLYEKGHRTLDDLKNEDSLTNSQKLGL---RYYDDIKQRIPRHEAEEMEHLLQKVGENVLPGVV 332          
BLAST of mRNA_E-fasciculatus_F_contig1356.2649.1 vs. uniprot
Match: A0A4Y1QQK2_PRUDU (DNA polymerase (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QQK2_PRUDU)

HSP 1 Score: 82.0 bits (201), Expect = 1.490e-14
Identity = 53/178 (29.78%), Postives = 93/178 (52.25%), Query Frame = 0
Query:   32 HAANSEAANMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGTQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGKMHRLDGLEADPKLKCLKLFQEISWVGAVKAHQLYDKGMRSIEDLRTKGLHLLSEQAQICLNSRHEDITQRMPRSEAAEIEGVVTKVAQSMCPGVI 209
            H +  +  N+   +  L    G D   F    +  A  V+ +L  +I ++ Q+KDL          +G S+   +      GK+ +L+  E D K++ L LF+EI  VG   A +LY+KG R+++DL+ +     S++  +     ++DI QR+PR EA E+E ++ KV +++ PGV+
Sbjct:  174 HTSIPKTLNLQIRIRSLHCTLGDDRRSFS---YYKAVPVIEKLPFKIQSVDQVKDLPN--------IGKSMQDHIQEIVTTGKLSKLEHFETDEKVRTLALFEEIWGVGPATALKLYEKGHRTLDDLKNEDSLTNSQKLGL---RYYDDIKQRIPRHEAEEMEHLLQKVGENVLPGVV 337          
BLAST of mRNA_E-fasciculatus_F_contig1356.2649.1 vs. uniprot
Match: UPI001E1DF101 (DNA polymerase lambda-like isoform X2 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF101)

HSP 1 Score: 81.6 bits (200), Expect = 1.900e-14
Identity = 54/190 (28.42%), Postives = 97/190 (51.05%), Query Frame = 0
Query:   23 CQLTTNSRGHAANSEAANMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGTQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGKMHRLDGLEADPKLKCLKLFQEISWVGAVKAHQLYDKGMRSIEDLRTKGLHLLSEQAQICLNSRHEDITQRMPRSEAAEIEGVVTKVAQSMCPGVICQA 212
            C  ++ +     N    + LE++ +           F   G++ A  VL++    IT+ +        E   +  +G  + +++    E G++ +L+ L +  ++K +++F+++   GA  A   Y +G R++EDLR K    L+ Q ++ L   ++DI  RMPRSEA EIE VV   A+S+  G+ICQA
Sbjct:  230 CAQSSKTAVENCNKHITDKLEEMVRTYESTNDKWRAF---GYQKAIQVLKKQSKPITSYE--------EAMALPSIGKRLAEKIWEIAESGELRKLNELRSSDEIKVIEMFKDVWGAGAHTARTWYQQGFRTLEDLRMKAN--LTHQQKVGLRC-YDDILDRMPRSEAGEIEKVVKDAAESLQEGIICQA 405          
BLAST of mRNA_E-fasciculatus_F_contig1356.2649.1 vs. uniprot
Match: UPI001E1DAC20 (DNA polymerase lambda-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DAC20)

HSP 1 Score: 81.6 bits (200), Expect = 1.960e-14
Identity = 54/190 (28.42%), Postives = 97/190 (51.05%), Query Frame = 0
Query:   23 CQLTTNSRGHAANSEAANMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGTQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGKMHRLDGLEADPKLKCLKLFQEISWVGAVKAHQLYDKGMRSIEDLRTKGLHLLSEQAQICLNSRHEDITQRMPRSEAAEIEGVVTKVAQSMCPGVICQA 212
            C  ++ +     N    + LE++ +           F   G++ A  VL++    IT+ +        E   +  +G  + +++    E G++ +L+ L +  ++K +++F+++   GA  A   Y +G R++EDLR K    L+ Q ++ L   ++DI  RMPRSEA EIE VV   A+S+  G+ICQA
Sbjct:  230 CAQSSKTAVENCNKHITDKLEEMVRTYESTNDKWRAF---GYQKAIQVLKKQSKPITSYE--------EAMALPSIGKRLAEKIWEIAESGELRKLNELRSSDEIKVIEMFKDVWGAGAHTARTWYQQGFRTLEDLRMKAN--LTHQQKVGLRC-YDDILDRMPRSEAGEIEKVVKDAAESLQEGIICQA 405          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1356.2649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2F8_ECTSI6.510e-13693.40DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5JHQ3_9PHAE5.680e-12490.82DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7G2F7_ECTSI2.360e-7664.65DNA polymerase lambda n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JQ91_9PHAE3.710e-4760.25DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A077ZZ96_STYLE6.570e-1633.14DNA polymerase n=1 Tax=Stylonychia lemnae TaxID=59... [more]
J9HWK2_9SPIT3.340e-1530.46DNA polymerase n=1 Tax=Oxytricha trifallax TaxID=1... [more]
A0A251R3K5_PRUPE7.610e-1530.00DNA polymerase n=2 Tax=Prunus persica TaxID=3760 R... [more]
A0A4Y1QQK2_PRUDU1.490e-1429.78DNA polymerase (Fragment) n=1 Tax=Prunus dulcis Ta... [more]
UPI001E1DF1011.900e-1428.42DNA polymerase lambda-like isoform X2 n=1 Tax=Merc... [more]
UPI001E1DAC201.960e-1428.42DNA polymerase lambda-like isoform X1 n=2 Tax=Merc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018944DNA polymerase lambda, fingers domainPFAMPF10391DNA_pol_lambd_fcoord: 131..175
e-value: 4.0E-11
score: 42.6
NoneNo IPR availableGENE3D1.10.150.20coord: 123..182
e-value: 1.9E-13
score: 52.0
NoneNo IPR availablePANTHERPTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERcoord: 31..210
NoneNo IPR availableSUPERFAMILY81585PsbU/PolX domain-likecoord: 124..176
IPR010996DNA polymerase beta-like, N-terminal domainPFAMPF14716HHH_8coord: 35..110
e-value: 1.7E-10
score: 41.1
IPR027421DNA polymerase lambda lyase domain superfamilyGENE3D1.10.150.110coord: 28..122
e-value: 2.9E-13
score: 51.9
IPR027421DNA polymerase lambda lyase domain superfamilySUPERFAMILY47802DNA polymerase beta, N-terminal domain-likecoord: 32..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1356contigE-fasciculatus_F_contig1356:12697..14862 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1356.2649.1mRNA_E-fasciculatus_F_contig1356.2649.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1356 12697..14862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1356.2649.1 ID=prot_E-fasciculatus_F_contig1356.2649.1|Name=mRNA_E-fasciculatus_F_contig1356.2649.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=212bp
MAVKGGFGARNPDVGKKRHTFHCQLTTNSRGHAANSEAANMLEDLAKLCA
VRGGDGSVFKERGFKNAAGVLRRLGTQITNIQQLKDLRKHEPQRVRGLGD
SVMKELSTFYEEGKMHRLDGLEADPKLKCLKLFQEISWVGAVKAHQLYDK
GMRSIEDLRTKGLHLLSEQAQICLNSRHEDITQRMPRSEAAEIEGVVTKV
AQSMCPGVICQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027421DNA_pol_lamdba_lyase_dom_sf
IPR010996DNA_pol_b-like_N
IPR018944DNA_pol_lambd_fingers_domain