prot_E-fasciculatus_F_contig13555.2646.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13555.2646.1
Unique Nameprot_E-fasciculatus_F_contig13555.2646.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length159
Homology
BLAST of mRNA_E-fasciculatus_F_contig13555.2646.1 vs. uniprot
Match: D8LNC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC9_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 3.090e-31
Identity = 61/87 (70.11%), Postives = 69/87 (79.31%), Query Frame = 0
Query:   72 MIRARRQRSSARPKGWPVRLGKLERYDESSISNFAYAVHMRDFMGDQTPPEIAPLEAGRLKMNFVQAVMVAVEIHEEGLFRHIITYL 158
            M+RARRQRS AR KGW  RL KL+ YDE++I  +A    MRDFMG QTPPEI  LEAGRLKMNFV+AV  A+EI EEGLFRHII+YL
Sbjct:    1 MMRARRQRSLARSKGWQARLRKLDHYDEANIMKYA----MRDFMGSQTPPEIELLEAGRLKMNFVRAVTAAIEIPEEGLFRHIISYL 83          
BLAST of mRNA_E-fasciculatus_F_contig13555.2646.1 vs. uniprot
Match: D8LNB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB4_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 5.190e-30
Identity = 62/88 (70.45%), Postives = 70/88 (79.55%), Query Frame = 0
Query:   72 MIRARRQRSS-ARPKGWPVRLGKLERYDESSISNFAYAVHMRDFMGDQTPPEIAPLEAGRLKMNFVQAVMVAVEIHEEGLFRHIITYL 158
            M+RAR +RSS AR KGW  RL KLERYDE+SI  +A    MRDFMG QTPPEI  LEAGRLKMNFV+AV+  VEI EEGLFRHI++YL
Sbjct:    1 MMRARHERSSSARSKGWRARLRKLERYDEASIIKYA----MRDFMGGQTPPEIELLEAGRLKMNFVRAVIAVVEIQEEGLFRHIMSYL 84          
BLAST of mRNA_E-fasciculatus_F_contig13555.2646.1 vs. uniprot
Match: D7FME9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME9_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.640e-27
Identity = 62/109 (56.88%), Postives = 76/109 (69.72%), Query Frame = 0
Query:   50 RLLKRLERNSGQETWKARGWLIMIRARRQRSSARPKGWPVRLGKLERYDESSISNFAYAVHMRDFMGDQTPPEIAPLEAGRLKMNFVQAVMVAVEIHEEGLFRHIITYL 158
            R ++RL    GQ  W A GWLIMIRAR QR  ARPKGWP+RL KLER++E++I      VH       + PPE+  LEAGR +MNFV+AV   VEI+EEGLFRHII++L
Sbjct:  199 RAVERLRTFPGQRRWHAGGWLIMIRARHQRFLARPKGWPIRLRKLERFNEANI------VH-------KIPPELELLEAGRSRMNFVRAVTAVVEINEEGLFRHIISFL 294          
BLAST of mRNA_E-fasciculatus_F_contig13555.2646.1 vs. uniprot
Match: D7FMF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF1_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 2.150e-19
Identity = 46/87 (52.87%), Postives = 58/87 (66.67%), Query Frame = 0
Query:   72 MIRARRQRSSARPKGWPVRLGKLERYDESSISNFAYAVHMRDFMGDQTPPEIAPLEAGRLKMNFVQAVMVAVEIHEEGLFRHIITYL 158
            M+RAR QRS  R  GWPVRL KLERY++++I N             + PPE+  LEAGR +MNF +A M  VE +EEGLFRHII++L
Sbjct:    1 MLRARHQRSLGRSTGWPVRLRKLERYNKANIFN-------------KIPPELELLEAGRSRMNFARAAMAVVETNEEGLFRHIISFL 74          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13555.2646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LNC9_ECTSI3.090e-3170.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNB4_ECTSI5.190e-3070.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FME9_ECTSI1.640e-2756.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FMF1_ECTSI2.150e-1952.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..158
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..18
score: 0.517
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13555contigE-fasciculatus_F_contig13555:1143..2032 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13555.2646.1mRNA_E-fasciculatus_F_contig13555.2646.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13555 1127..2527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13555.2646.1 ID=prot_E-fasciculatus_F_contig13555.2646.1|Name=mRNA_E-fasciculatus_F_contig13555.2646.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=159bp
MQSAWLIFFLCLKSIVPAFLLCWCLRCLCRFCIDRHREAELHKDNLFMLR
LLKRLERNSGQETWKARGWLIMIRARRQRSSARPKGWPVRLGKLERYDES
SISNFAYAVHMRDFMGDQTPPEIAPLEAGRLKMNFVQAVMVAVEIHEEGL
FRHIITYL*
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