mRNA_E-fasciculatus_F_contig13554.2645.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13554.2645.1 vs. uniprot
Match: D8LMN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN2_ECTSI) HSP 1 Score: 510 bits (1314), Expect = 1.860e-168 Identity = 253/255 (99.22%), Postives = 255/255 (100.00%), Query Frame = 1
Query: 34 MDILMAKAEEPTALVNPPEGVMDRIHFVINNVTTSNLSSKVSEIKSHIQSHPEHHGWLANYLVVKRICTQPNFHDLYLDLVKELETPPLMDAILKSVFHNVGKLLRSQKIITSTSERSLLKNLGSWLGKITLGRDKPVLQRELDMKELLFQGYETGRLIAVTPFVAKILEGAPSGNSRVFKPPNPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNLSAHRAAAR 798
MDILMAKAEEPTALVNPPEGVMDRIHFVINNVTTSNLSSKVSEIK+HIQ+HPEHHGWLANYLVVKRICTQPNFHDLYLDLVKELETPPLMDAILKSVFHNVGKLLRSQKIITSTSERSLLKNLGSWLGKITLGRDKPVLQRELDMKELLFQGYETGRLIAVTPFVAKILEGAPSGNSRVFKPPNPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNLSAHRAAAR
Sbjct: 1 MDILMAKAEEPTALVNPPEGVMDRIHFVINNVTTSNLSSKVSEIKTHIQNHPEHHGWLANYLVVKRICTQPNFHDLYLDLVKELETPPLMDAILKSVFHNVGKLLRSQKIITSTSERSLLKNLGSWLGKITLGRDKPVLQRELDMKELLFQGYETGRLIAVTPFVAKILEGAPSGNSRVFKPPNPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNLSAHRAAAR 255
BLAST of mRNA_E-fasciculatus_F_contig13554.2645.1 vs. uniprot
Match: A0A6H5JXN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN6_9PHAE) HSP 1 Score: 526 bits (1356), Expect = 8.590e-168 Identity = 260/266 (97.74%), Postives = 264/266 (99.25%), Query Frame = 1
Query: 1 PRAPDSLGTPNMDILMAKAEEPTALVNPPEGVMDRIHFVINNVTTSNLSSKVSEIKSHIQSHPEHHGWLANYLVVKRICTQPNFHDLYLDLVKELETPPLMDAILKSVFHNVGKLLRSQKIITSTSERSLLKNLGSWLGKITLGRDKPVLQRELDMKELLFQGYETGRLIAVTPFVAKILEGAPSGNSRVFKPPNPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNLSAHRAAAR 798
PRAPDSLGTPNMDILMAKAEEPT LVNPPEGVMDRIHFVINNVTTSNLSSKVSEIK+HIQ+HPEHHGWLANYLVVKRICTQPNFHDLYLDLVKELETPPLMDAILKSVFHNVGKLLRSQKIITSTSERSLLKNLGSWLGKITLGRDKPVLQRELD+KELLFQGYETGRLIAVTPFVAKILEGAPSGNSRVFKPPNPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTI DVPMYGRLRTRMTPAKEKNPDFNL+AHRAAAR
Sbjct: 1374 PRAPDSLGTPNMDILMAKAEEPTPLVNPPEGVMDRIHFVINNVTTSNLSSKVSEIKAHIQNHPEHHGWLANYLVVKRICTQPNFHDLYLDLVKELETPPLMDAILKSVFHNVGKLLRSQKIITSTSERSLLKNLGSWLGKITLGRDKPVLQRELDIKELLFQGYETGRLIAVTPFVAKILEGAPSGNSRVFKPPNPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTIGDVPMYGRLRTRMTPAKEKNPDFNLAAHRAAAR 1639
BLAST of mRNA_E-fasciculatus_F_contig13554.2645.1 vs. uniprot
Match: A0A835ZHM2_9STRA (CCR4-Not complex component, Not1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHM2_9STRA) HSP 1 Score: 356 bits (914), Expect = 2.070e-108 Identity = 172/252 (68.25%), Postives = 205/252 (81.35%), Query Frame = 1
Query: 19 LGTPNMDILMAKAEEPTALVNPPEGVMDRIHFVINNVTTSNLSSKVSEIKSHIQSHPEHHGWLANYLVVKRICTQPNFHDLYLDLVKELETPPLMDAILKSVFHNVGKLLRSQKIITSTSERSLLKNLGSWLGKITLGRDKPVLQRELDMKELLFQGYETGRLIAVTPFVAKILEGAPSGNSRVFKPPNPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNL 774
L P++D +M EP PP+ +MDRIHF+INNV+ SNL +KV+EI++ I HPE++ W+ANYLVVKRI TQPNFH LYL + L+ P L DA+L+SVFHNVGKLLRS KIITSTSERSLLKNLGSWLG+ TL R++PVLQR+LD+KELLF+GYETGRLIAVTPFVAKILEGA S VF+PPNPW+MGL SALHEMY+LEDLKMNIKFE+EML +K N+ + DVP YGRL R P K+KNPDFN+
Sbjct: 1127 LDAPDIDSIMLSTREPPTAEPPPDAIMDRIHFIINNVSPSNLEAKVAEIRAQIAGHPEYYAWMANYLVVKRISTQPNFHALYLQFIDCLDAPGLADAVLRSVFHNVGKLLRSGKIITSTSERSLLKNLGSWLGQTTLARNRPVLQRQLDLKELLFRGYETGRLIAVTPFVAKILEGAQ--RSAVFQPPNPWLMGLLSALHEMYDLEDLKMNIKFEVEMLVKKLNIRLEDVPKYGRLARRRPPVKDKNPDFNV 1376
BLAST of mRNA_E-fasciculatus_F_contig13554.2645.1 vs. uniprot
Match: A0A7S2RRA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRA8_9STRA) HSP 1 Score: 300 bits (767), Expect = 5.560e-96 Identity = 152/249 (61.04%), Postives = 186/249 (74.70%), Query Frame = 1
Query: 34 MDILMAKAEEPTALVNPPEGVMDRIHFVINNVTTSNLSSKVSEIKSHIQSHPEHHGWLANYLVVKRICTQPNFHDLYLDLVKELETPPLMDAILKSVFHNVGKLLRSQKIITSTSERSLLKNLGSWLGKITLGRDKPVLQRELDMKELLFQGYETGRLIAVTPFVAKILEGAPSGNSRVFKPPNPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNLSA 780
M+++M E A PP+ V+ R+H +NNV+ SNL KVSE ++ + EH W +YLV KRI TQ NFH LYL V ++ETP LM +IL SVFHNV LL S KI TSTS+RSLLKNLGSWLG++TL R+KP+LQR LDMKELL QGYETGRLIAVTPFVAKILEG ++RVF+PPNPWIMGL +HE+Y+L+DLKMNI+FEIE+LC+ + I DVP +G L R+ P KEKNPDFN+ A
Sbjct: 176 MELIMPIGAEAPAASPPPDMVVQRVHLALNNVSMSNLEQKVSETRTMLSV--EHLAWFGSYLVTKRISTQANFHQLYLAFVLKMETPELMMSILASVFHNVAILLSSPKITTSTSDRSLLKNLGSWLGQMTLARNKPILQRNLDMKELLCQGYETGRLIAVTPFVAKILEGGK--DTRVFRPPNPWIMGLMGVMHELYDLDDLKMNIRFEIEVLCKHLGLKIDDVPKHGVLVHRLQPRKEKNPDFNVRA 420
BLAST of mRNA_E-fasciculatus_F_contig13554.2645.1 vs. uniprot
Match: A0A7R9VXD3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VXD3_9STRA) HSP 1 Score: 282 bits (721), Expect = 6.740e-87 Identity = 145/234 (61.97%), Postives = 177/234 (75.64%), Query Frame = 1
Query: 82 PPEGVMDRIHFVINNVTTSNLSSKVSEIKSHIQSHPEHHGWLANYLVVKRICTQPNFHDLYLDLVKELET--PPLMDAILKSVFHNVGKLLRSQKIITSTSERSLLKNLGSWLGKITLGRDKPVLQRELDMKELLFQGYETGRLIAVTPFVAKILEGAPSGNSRVFKPPNPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTIADVPMY-GRLRTRMTPAKEKNPDFNL 774
PP+ V+DR+ F+INNV+ SN+ K E+K + P++ GWL NYLVVKRI TQPNFH LYL + +L L++AIL SV+ NVGKLLRS KI TSTSERSLLKNLGSWLG+ITL R++P+LQ LD KELLFQGYETG LIAVTPFVAKILEGA S S VF+PPNPW+MGL +Y +EDLKMNIKFE+E+LC+ NV + D+P+ L R+ P KE+NPDFN+
Sbjct: 199 PPDAVLDRVQFLINNVSPSNVEQKAQELKDMLA--PKYFGWLGNYLVVKRISTQPNFHSLYLAFLDQLGDYGKGLVEAILSSVYLNVGKLLRSPKITTSTSERSLLKNLGSWLGQITLARNRPILQIMLDCKELLFQGYETGMLIAVTPFVAKILEGAKS--SVVFRPPNPWLMGLLGVFCALYGVEDLKMNIKFEVEVLCKNLNVKLEDIPIRTSELAKRIPPVKERNPDFNI 428
BLAST of mRNA_E-fasciculatus_F_contig13554.2645.1 vs. uniprot
Match: K0TIV2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIV2_THAOC) HSP 1 Score: 285 bits (729), Expect = 1.330e-83 Identity = 147/240 (61.25%), Postives = 181/240 (75.42%), Query Frame = 1
Query: 82 PPEGVMDRIHFVINNVTTSNLSSKVSEIKSHIQSHPEHHGWLANYLVVKRICTQPNFHDLYLDLVKELET--PPLMDAILKSVFHNVGKLLRSQKIITSTSERSLLKNLGSWLGKITLGRDKPVLQRELDMKELLFQGYETGRLIAVTPFVAKILEGAPSGNSRVFKPPNPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNLSAHRAAA 795
PP+ V+DR+ F++NN++ SN K ++++ + ++ GWL N+LVVKRI TQPNFH LYL ++ L L++AIL SV+ NVGKLLRSQKI TSTSERSLLKNLGSWLG+ITL R++P+LQ LD KELL QGYETG LIAVTPFVAKILEGA NS VF+PPNPW+MGL S +Y ++DLKMNIKFE+E+LC+ V + DVPM L TR+ P KEKNPDFNL A AAA
Sbjct: 875 PPDAVLDRVQFLVNNLSMSNCKEKSNDLREILDR--KYFGWLGNFLVVKRISTQPNFHALYLSFLENLGEYGRGLVEAILASVYVNVGKLLRSQKITTSTSERSLLKNLGSWLGQITLARNRPILQIMLDCKELLLQGYETGMLIAVTPFVAKILEGAK--NSIVFRPPNPWLMGLLSVFRALYCVDDLKMNIKFEVEVLCKNLGVKLEDVPMRTDLSTRVPPVKEKNPDFNLKASSAAA 1110
BLAST of mRNA_E-fasciculatus_F_contig13554.2645.1 vs. uniprot
Match: A0A7S0UKJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UKJ1_9STRA) HSP 1 Score: 261 bits (667), Expect = 1.760e-82 Identity = 133/245 (54.29%), Postives = 173/245 (70.61%), Query Frame = 1
Query: 55 AEEPTALVNPPEGVMDRIHFVINNVTTSNLSSKVSEIKSHIQSHPEHHGWLANYLVVKRICTQPNFHDLYLDLVKELET--PPLMDAILKSVFHNVGKLLRSQKIITSTSERSLLKNLGSWLGKITLGRDKPVLQRELDMKELLFQGYETGRLIAVTPFVAKILEGAPSGNSRVFKPPNPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYG-RLRTRMTPAKEKNPDFNLSA 780
A+E +PP+ ++DRI F+INN+ SN+ SK E+K ++ P++ WLA++LVVKRI TQ N+H LYL + L L++AIL S + N+GKLLRS KI TS+SERS LKNLG WLG+ITL R++P+LQ LD KELL QGYETG+LIAV PF+AK LEGA NS VF+PPNPW+MGL +Y +E LKMNIKFE+E+LC+ + D+P+ L R+ P KEKNPDFN+ A
Sbjct: 37 ADEEQEHESPPQNLLDRIQFLINNLAPSNVESKSQELKDLLE--PKYFSWLAHFLVVKRISTQANYHSLYLSFLDNLGEYGKGLLEAILDSAYRNIGKLLRSPKITTSSSERSYLKNLGIWLGQITLARNRPILQLMLDCKELLLQGYETGKLIAVAPFLAKTLEGAK--NSGVFRPPNPWLMGLLGVFRSVYNVEGLKMNIKFEVEVLCKNLGTRLEDIPLKDMELAKRVAPVKEKNPDFNIKA 277
BLAST of mRNA_E-fasciculatus_F_contig13554.2645.1 vs. uniprot
Match: A0A7S2UP57_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UP57_9STRA) HSP 1 Score: 281 bits (719), Expect = 2.930e-82 Identity = 147/246 (59.76%), Postives = 178/246 (72.36%), Query Frame = 1
Query: 52 KAEEPTALVNPPEGVMDRIHFVINNVTTSNLSSKVSEIKSHIQSHPEHHGWLANYLVVKRICTQPNFHDLYLDLVKELET--PPLMDAILKSVFHNVGKLLRSQKIITSTSERSLLKNLGSWLGKITLGRDKPVLQRELDMKELLFQGYETGRLIAVTPFVAKILEGAPSGNSRVFKPPNPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGR-LRTRMTPAKEKNPDFNLSA 780
K + T PP+ V+DR+ F+INNV+ SN+ K E+K + P++ GWL +YLVVKRI TQPNFH LYL + +L L+DAIL SV+ NVGKLLRS KI TSTSERSLLKNLGSWLG+ITL R++P+LQ LD KELLFQGYETG LIAVTPFVAKILEGA NS VF+PPNPW+MGL S +Y +EDLKMNIKFE+E+LC+ + D+P+ L R P K KNPDFNL +
Sbjct: 1128 KVDSETQHEAPPDSVLDRVQFLINNVSPSNVEQKSQELKDMLD--PKYFGWLGHYLVVKRISTQPNFHSLYLTFLDQLGDYGKGLVDAILSSVYLNVGKLLRSPKITTSTSERSLLKNLGSWLGQITLARNRPILQIMLDCKELLFQGYETGMLIAVTPFVAKILEGAK--NSSVFRPPNPWLMGLLSVFRALYGVEDLKMNIKFEVEVLCKNMGFKLEDIPLRTNDLSKRFPPEKAKNPDFNLKS 1369
BLAST of mRNA_E-fasciculatus_F_contig13554.2645.1 vs. uniprot
Match: A0A7S3NMR3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NMR3_9STRA) HSP 1 Score: 280 bits (715), Expect = 9.070e-82 Identity = 149/270 (55.19%), Postives = 188/270 (69.63%), Query Frame = 1
Query: 31 NMDILMAKAEEPTALVNPPEGVMDRIHFVINNVTTSNLSSKVSEIKSHIQSHPEHHGWLANYLVVKRICTQPNFHDLYLDLVKEL-----------ETPPLMD--------AILKSVFHNVGKLLRSQKIITSTSERSLLKNLGSWLGKITLGRDKPVLQRELDMKELLFQGYETGRLIAVTPFVAKILEGAPSGNSRVFKPPNPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTIADVP---MYGRLRTRMTPAKEKNPDFNL 774
NM LM ++E V P E V+D +H V NNV+ SN+ KV +I ++ PEH W ANYLVVKRI TQPNFH LYLD +++L PLM A++ +V+HN+ KLLRS KI TSTSERSLLKNLGSWLG+ITL +++P+LQR LD+KELLFQGYETGRLIA+ PFVAKILEGA NS VF+PPNPW+MGL + L E+Y +EDLKMNIKFEIE+L + + + ++P + L R+TP KE+NPDFN+
Sbjct: 133 NMSELMPASQEAPPTVVPSEIVLDCVHMVFNNVSQSNVDDKVKDIAPLLK--PEHFPWFANYLVVKRISTQPNFHSLYLDFLEKLGDFENQNKKKGNANPLMTPRARALNKAVVNAVYHNIAKLLRSNKITTSTSERSLLKNLGSWLGQITLQKNRPILQRRLDVKELLFQGYETGRLIAICPFVAKILEGAK--NSIVFRPPNPWLMGLMAVLGELYHVEDLKMNIKFEIEVLAKHLGIKLDEIPTTILSQSLAKRLTPHKERNPDFNV 398
BLAST of mRNA_E-fasciculatus_F_contig13554.2645.1 vs. uniprot
Match: A0A7S3YCC2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCC2_HETAK) HSP 1 Score: 258 bits (659), Expect = 1.380e-81 Identity = 138/264 (52.27%), Postives = 186/264 (70.45%), Query Frame = 1
Query: 4 RAPDSLGTP-NMDILMAKAE-EPTALVNPPEGVMDRIHFVINNVTTSNLSSKVSEIKSHIQSHPEHHGWLANYLVVKRICTQPNFHDLYLDLVKELETPPLMDA-ILKSVFHNVGKLLRSQKIITSTSERSLLKNLGSWLGKITLGRDKPVLQRELDMKELLFQGYETGRLIAVTPFVAKILEGAPSGNSRVFKPPNPWIMGLFSALHEMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRL--RTRMTPAKEKNPDFNLSA 780
R P +LG P ++ LM + A +PPE V DR HF+INN++++NL K E++ + + P H WLA YLVVKRI TQPNFH LYL ++ +L + A +L +V+ +V +LL S KI+TST+ERSLLKNLGSWLG+ TL RD+PVLQR LD++ LL +GYETGRLIAV PF AK+L GA S+VF+PPNPW+MGL + L E+Y+++ LKMNIKFE+E+LC+ +++ +VP GR+ R P K KNPDF + A
Sbjct: 6 RGPVALGAPLDLSELMPTVDLSAPAPADPPEAVRDRCHFLINNISSANLEPKAEELRR-VLADPAHLPWLAGYLVVKRISTQPNFHGLYLAMLDKLGLGERLGAPLLAAVYRSVARLLLSPKIVTSTAERSLLKNLGSWLGQATLARDRPVLQRALDLRALLLRGYETGRLIAVVPFAAKVLGGAQG--SQVFRPPNPWLMGLLAVLRELYDVDGLKMNIKFEVEVLCKALGLSLGEVPK-GRVLRREAAAPQKLKNPDFMVKA 265 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13554.2645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13554.2645.1 >prot_E-fasciculatus_F_contig13554.2645.1 ID=prot_E-fasciculatus_F_contig13554.2645.1|Name=mRNA_E-fasciculatus_F_contig13554.2645.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=313bp PRAPDSLGTPNMDILMAKAEEPTALVNPPEGVMDRIHFVINNVTTSNLSSback to top mRNA from alignment at E-fasciculatus_F_contig13554:74..3160- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13554.2645.1 ID=mRNA_E-fasciculatus_F_contig13554.2645.1|Name=mRNA_E-fasciculatus_F_contig13554.2645.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3087bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13554:74..3160- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13554:74..3160- >mRNA_E-fasciculatus_F_contig13554.2645.1 ID=mRNA_E-fasciculatus_F_contig13554.2645.1|Name=mRNA_E-fasciculatus_F_contig13554.2645.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1878bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13554:74..3160- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |