prot_E-fasciculatus_F_contig13553.2644.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13553.2644.1
Unique Nameprot_E-fasciculatus_F_contig13553.2644.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length202
Homology
BLAST of mRNA_E-fasciculatus_F_contig13553.2644.1 vs. uniprot
Match: D7FPN8_ECTSI (RecG-like helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN8_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 5.240e-129
Identity = 189/202 (93.56%), Postives = 198/202 (98.02%), Query Frame = 0
Query:    1 DALKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSHVADLVEGEVATMLLKVVKVQSDPLRRSPKITRVHCVDVAEDKIDIVVFGGSWLCKNYKPGETKVVSGKVTMDKYSGALVMSSPEVVAPAADLEKVLVIQPTYPLTAGLSGPSLRSVIALALDQLEGVTQFPPEWIDRETIREHGWPSLREALSAAHSPQQE 202
            DALKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETS VA+LVEGEVAT+LLKVVKVQSDP +RSP+ITRVHCVDV EDKIDIV+FGGSWLCKNY+PGETKVVSGKVTMDKYSGALVM+SPEVVAPAADLEKVLVIQPTYPLTAGLSG SLRSVIALALDQLEGVTQFPPEWID+ET+REHGWPSLREALSAAHSPQQE
Sbjct:  195 DALKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSRVANLVEGEVATLLLKVVKVQSDPRKRSPRITRVHCVDVVEDKIDIVMFGGSWLCKNYEPGETKVVSGKVTMDKYSGALVMNSPEVVAPAADLEKVLVIQPTYPLTAGLSGSSLRSVIALALDQLEGVTQFPPEWIDQETMREHGWPSLREALSAAHSPQQE 396          
BLAST of mRNA_E-fasciculatus_F_contig13553.2644.1 vs. uniprot
Match: A0A6H5JXY9_9PHAE (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY9_9PHAE)

HSP 1 Score: 376 bits (966), Expect = 7.620e-119
Identity = 189/202 (93.56%), Postives = 196/202 (97.03%), Query Frame = 0
Query:    1 DALKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSHVADLVEGEVATMLLKVVKVQSDPLRRSPKITRVHCVDVAEDKIDIVVFGGSWLCKNYKPGETKVVSGKVTMDKYSGALVMSSPEVVAPAADLEKVLVIQPTYPLTAGLSGPSLRSVIALALDQLEGVTQFPPEWIDRETIREHGWPSLREALSAAHSPQQE 202
            DALKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSHVADLVEGEVATMLLKVVKVQSDP  RSP+ITRVHCVDVAEDKIDIV+FGGSWLCKNY+PGETKVVSGKVTMDKYS +LVM+ PEVVAPAADLEKVLVIQPTYPLTAGLSG SLRSVIALALDQLEGVT FPPEWID+ET+REHGWPSLREALSAAHSPQQE
Sbjct:  125 DALKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSHVADLVEGEVATMLLKVVKVQSDPRWRSPRITRVHCVDVAEDKIDIVMFGGSWLCKNYEPGETKVVSGKVTMDKYSESLVMTMPEVVAPAADLEKVLVIQPTYPLTAGLSGSSLRSVIALALDQLEGVTHFPPEWIDQETMREHGWPSLREALSAAHSPQQE 326          
BLAST of mRNA_E-fasciculatus_F_contig13553.2644.1 vs. uniprot
Match: UPI00167A4736 (ATP-dependent DNA helicase RecG n=1 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI00167A4736)

HSP 1 Score: 137 bits (344), Expect = 7.120e-34
Identity = 79/199 (39.70%), Postives = 114/199 (57.29%), Query Frame = 0
Query:    3 LKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSHVADLVEGEVATMLLKVVKVQSDPLRRSPKITRVHCVDVAEDKIDIVVFG--GSWLCKNYKPGETKVVSGKVTMDKYSGALVMSSPEVVAPAADLEKVLVIQPTYPLTAGLSGPSLRSVIALALDQLEGVTQFPPEWIDRETIREHGWPSLREALSAAHSP 199
            +KGVGPR A+ + K     + DLLWHLP+G+VDRR    + +  EG +AT+ L V++ Q  P RR P   RV C D   D ID+V F   G WL K    GE +VVSG+V  +++ G   M+ P+ V P A+ +++ +++PTYP T GL    L   +  AL++L  +    PEWI    + + GWP   EA+   H+P
Sbjct:   16 IKGVGPRYAKLIEKAAGPQLVDLLWHLPSGVVDRRPAPPIPEAPEGRIATLTLTVLRHQPSPNRRGPY--RVVCTDGHGD-IDLVYFHAKGDWLEKLLPVGERRVVSGRV--ERFQGRAQMAHPDHVVPEAEADQIRIVEPTYPTTEGLPVRILGKAVGGALERLPTL----PEWISPSLVAQRGWPRWDEAIRRVHAP 205          
BLAST of mRNA_E-fasciculatus_F_contig13553.2644.1 vs. uniprot
Match: A0A6L7ZYW1_9PROT (DNA helicase (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6L7ZYW1_9PROT)

HSP 1 Score: 128 bits (322), Expect = 1.270e-33
Identity = 79/201 (39.30%), Postives = 111/201 (55.22%), Query Frame = 0
Query:    2 ALKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSHVADLVEGEVATMLLKVVKVQSDPLRRSPKITRVHCVDVAEDKIDIVVFGGS--WLCKNYKPGETKVVSGKVTMDKYSGALVMSSPEVVAPAADLEKVLVIQPTYPLTAGLSGPSLRSVIALALDQLEGVTQFPPEWIDRETIREHGWPSLREALSAAHSPQ 200
            AL G+GPR  E +A++    + DLLW LPTG+VDRR    VA+ V GE+AT+ +++   +     + P   RV C D     + +V F     WL K Y  GET+VVSG+V  D++ G   M+ P+    AA  + +  + P YPLT GL+  +++  I  ALD+    TQ  PEW D   I +  WP  REAL  AH P+
Sbjct:   15 ALPGIGPRLKELVARVAGPRIVDLLWTLPTGLVDRRHAPKVAEAVIGEIATITVRIDAHEQPGAPKRPY--RVICSDET-GFLTLVFFHAKQDWLEKTYPVGETRVVSGRV--DEFGGGRQMTHPDFAVSAAQADSIRTVHPVYPLTQGLTRTAMKRAIDGALDRAP--TQ--PEWADAALIAQRQWPDWREALQRAHRPE 206          
BLAST of mRNA_E-fasciculatus_F_contig13553.2644.1 vs. uniprot
Match: A0A3M1JVB7_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JVB7_9PROT)

HSP 1 Score: 133 bits (335), Expect = 1.210e-32
Identity = 81/200 (40.50%), Postives = 114/200 (57.00%), Query Frame = 0
Query:    3 LKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSHVADLVEGEVATMLLKVVKVQSDPLR-RSPKITRVHCVDVAEDKIDIVVFGGS--WLCKNYKPGETKVVSGKVTMDKYSGALVMSSPEVVAPAADLEKVLVIQPTYPLTAGLSGPSLRSVIALALDQLEGVTQFPPEWIDRETIREHGWPSLREALSAAHSP 199
            L GVG R A  LA++G+  V DLLWHLPTGMVDRR +  V D  +G +AT+ ++V +    P R R P   RV C D +   IDIV F  +  ++ +    G  +V+SGKV  + + G + MS P+ +    D +++  ++P YPLTAGLSG  LR  I  ALD    +     EW++       GWP  R A++AAH+P
Sbjct:   16 LPGVGGRTAAHLARMGIARVVDLLWHLPTGMVDRRHSPRVKDAGDGVIATLTVEVARHHPAPPRGRRPY--RVKCFDDS-GTIDIVFFHANRDYIQEMLPEGAVRVISGKV--EHFHGQVQMSHPDYILRPEDRDRIPALEPVYPLTAGLSGKVLRKAITAALDTAPDLQ----EWLEPAHQARQGWPDWRRAITAAHAP 206          
BLAST of mRNA_E-fasciculatus_F_contig13553.2644.1 vs. uniprot
Match: A8TKY0_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=alpha proteobacterium BAL199 TaxID=331869 RepID=A8TKY0_9PROT)

HSP 1 Score: 132 bits (333), Expect = 2.270e-32
Identity = 77/200 (38.50%), Postives = 116/200 (58.00%), Query Frame = 0
Query:    3 LKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSHVADLVEGEVATMLLKVVKVQSDPLRRSPKITRVHCVDVAEDKIDIVVFG--GSWLCKNYKPGETKVVSGKVTMDKYSGALVMSSPEVVAPAADLEKVLVIQPTYPLTAGLSGPSLRSVIALALDQLEGVTQFPPEWIDRETIREHGWPSLREALSAAHSPQ 200
            +KGVGPR A+ + K     + DLLWHLP+G+VDRR +  + +  +G VAT+ L V++ Q  P RR P   RV C D   D ID+V F   G WL K    GE +VVSG+  ++++ G   M+ PE V P  + E++ +++PTYP T GL   +LR  +  AL+++  +     EW+    + +  WP   EA+  AH+P+
Sbjct:   16 IKGVGPRYAKLIEKAAGPQIVDLLWHLPSGVVDRRPSPPIPEAPDGRVATLTLTVLRHQPPPGRRGPY--RVVCSDGHAD-IDLVYFHAKGDWLEKLLPVGEVRVVSGR--LERFQGRAQMAHPEHVVPEEEAEEIRIVEPTYPSTEGLPMRTLRRAVEGALERIPTLD----EWMSPSLLAQRAWPRWDEAVRRAHAPE 206          
BLAST of mRNA_E-fasciculatus_F_contig13553.2644.1 vs. uniprot
Match: A0A1G7A333_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Rhodospira trueperi TaxID=69960 RepID=A0A1G7A333_9PROT)

HSP 1 Score: 132 bits (331), Expect = 4.300e-32
Identity = 79/206 (38.35%), Postives = 116/206 (56.31%), Query Frame = 0
Query:    2 ALKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSHVADLVEGEVATMLLKVVKVQSDPLRRSPKITRVHCVDVAEDK---IDIVVFGGS--WLCKNYKPGETKVVSGKVTMDKYSGALVMSSPEVVAPAADLEKVLVIQPTYPLTAGLSGPSLRSVIALALDQLEGVTQFPPEWIDRETIREHGWPSLREALSAAHSPQQE 202
            +LKGVG R A  + KL    V D+LWHLPTG++DRR    VA+ V G +AT++L V     D  R  P  +R      A D+   + +V F  S  ++ K    GE + VSG++  + Y+    M+ P+ VAP ++L ++  ++P +PLT GL+  +LR V+  AL     V +  PEW+D   +  HGWP+  EAL AAH P+ E
Sbjct:   15 SLKGVGGRVAPLIEKLAGPKVVDVLWHLPTGVIDRRHRPKVAEAVPGRIATLVLTV-----DEHRPPPPASRAPYRIAASDETGTLTLVFFRASRDYMMKLLPIGEQRAVSGRI--EYYNDLPQMAHPDHVAPVSELAEIQTVEPVHPLTQGLTPKTLRKVVESALAAGLKVAEQTPEWLDPSVLERHGWPAWGEALRAAHHPEDE 213          
BLAST of mRNA_E-fasciculatus_F_contig13553.2644.1 vs. uniprot
Match: Q2RTL7_RHORT (ATP-dependent DNA helicase RecG n=2 Tax=Rhodospirillum rubrum TaxID=1085 RepID=Q2RTL7_RHORT)

HSP 1 Score: 131 bits (329), Expect = 8.150e-32
Identity = 81/203 (39.90%), Postives = 116/203 (57.14%), Query Frame = 0
Query:    2 ALKGVGPRKAEQLAKL-GVTTVADLLWHLPTGMVDRRETSHVADLVEGEVATMLLKVVKVQSDPLRRSPKITRVHCVDVAEDKIDIVVFGGS--WLCKNYKPGETKVVSGKVTMDKYSGALVMSSPEVVAPAADLEKVLVIQPTYPLTAGLSGPSLRSVIALALDQLEGVTQFPPEWIDRETIREHGWPSLREALSAAHSPQQ 201
            +LKG G   A  +A+L G   V DLLWHLP+G+VDRR +  +A+  +G V T+ + VV+   +P  RSP   RV C D A   + +V F G   +L      GET+V+SGKV  +++ GA  +  P  V P A+ E V  ++P YPL+ G++G  L  +IA ALD +     +P EWID       GWP   +AL A H+P++
Sbjct:   15 SLKGAGKTMAPLIARLIGGDKVVDLLWHLPSGLVDRRFSPLIAEAPDGVVVTLTV-VVEAHQEPPPRSPSPYRVVCRD-ASGFVTLVFFHGRARYLNDLLPVGETRVISGKV--ERFGGAPQIVHPTHVVPLAEAEAVCRVEPVYPLSGGVAGKVLARLIAQALDDIPDPAAWPDEWIDAPLKAREGWPGWIDALRAVHAPEE 213          
BLAST of mRNA_E-fasciculatus_F_contig13553.2644.1 vs. uniprot
Match: UPI001B8C2549 (ATP-dependent DNA helicase RecG n=1 Tax=Magnetospirillum sp. J10 TaxID=611300 RepID=UPI001B8C2549)

HSP 1 Score: 129 bits (325), Expect = 2.780e-31
Identity = 79/203 (38.92%), Postives = 113/203 (55.67%), Query Frame = 0
Query:    3 LKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSHVADLVEGEVATMLLKVVKVQSDPLRRSPKIT-RVHCVDVAEDKIDIVVFGG--SWLCKNYKPGETKVVSGKVTMDKYSGALVMSSPEVVAPAADLEKVLVIQPTYPLTAGLSGPSLRSVIALALDQLEGVTQFPPEWIDRETIREHGWPSLREALSAAHSPQQE 202
            L G+GP+ A    +L    V DLLWHLP+G++DRR    +AD   G+VAT+    V++ +     SPK   RV C D     + +V F G   WL +    GE +V+SG V  + ++  + M+ P+ + P AD E+V+ I+P YPLT GL+G  +   + LA++Q   +    PEW D    R  GWPS R+AL A H PQ E
Sbjct:   16 LAGIGPKMAPLYERLAGGRVLDLLWHLPSGVIDRRFAPKLADAPSGKVATL---TVQIDAHIPSNSPKRPYRVRCSDET-GFLHLVFFHGREDWLRRQLPEGEWRVISGVV--EHFNTEIQMTHPDHMVPVADKEQVMSIEPVYPLTGGLTGRMVTKTVRLAVEQAPQL----PEWQDEAWFRRQGWPSWRQALEALHQPQSE 208          
BLAST of mRNA_E-fasciculatus_F_contig13553.2644.1 vs. uniprot
Match: A0A7C9KMS4_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9KMS4_9PROT)

HSP 1 Score: 129 bits (323), Expect = 5.380e-31
Identity = 76/199 (38.19%), Postives = 112/199 (56.28%), Query Frame = 0
Query:    3 LKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSHVADLVEGEVATMLLKVVKVQSDPLRRSPKITRVHCVDVAEDKIDIVVFGG--SWLCKNYKPGETKVVSGKVTMDKYSGALVMSSPEVVAPAADLEKVLVIQPTYPLTAGLSGPSLRSVIALALDQLEGVTQFPPEWIDRETIREHGWPSLREALSAAHSP 199
            L G+GPR A  + +L    V DLLWHLP+G++DRR +  + D   G VAT+ + V K    P RR+P   RV   D    ++D+V F     WL K    GE +VVSG+V +  + G L M+ P+ +A  A+ +K+  I+P +PLT GLS  +L   IA ++     +    PEW+D + +R  GWP  R A++ A +P
Sbjct:   16 LPGIGPRIARLVERLAGAKVVDLLWHLPSGLIDRRFSPTIKDAPAGAVATIAVHVDKHVKPPARRAPY--RVKVSD-GTGRMDLVFFNAHDDWLAKALPVGEDRVVSGRVEL--FRGVLQMTHPDHIATPAERDKLAAIEPVWPLTQGLSPKTLARAIAASVADAPNL----PEWLDPQLVRREGWPPWRTAVAKAQAP 205          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13553.2644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPN8_ECTSI5.240e-12993.56RecG-like helicase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JXY9_9PHAE7.620e-11993.56ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus... [more]
UPI00167A47367.120e-3439.70ATP-dependent DNA helicase RecG n=1 Tax=Thalassoba... [more]
A0A6L7ZYW1_9PROT1.270e-3339.30DNA helicase (Fragment) n=1 Tax=Rhodospirillaceae ... [more]
A0A3M1JVB7_9PROT1.210e-3240.50ATP-dependent DNA helicase RecG n=1 Tax=Alphaprote... [more]
A8TKY0_9PROT2.270e-3238.50ATP-dependent DNA helicase RecG n=1 Tax=alpha prot... [more]
A0A1G7A333_9PROT4.300e-3238.35ATP-dependent DNA helicase RecG n=1 Tax=Rhodospira... [more]
Q2RTL7_RHORT8.150e-3239.90ATP-dependent DNA helicase RecG n=2 Tax=Rhodospiri... [more]
UPI001B8C25492.780e-3138.92ATP-dependent DNA helicase RecG n=1 Tax=Magnetospi... [more]
A0A7C9KMS4_9PROT5.380e-3138.19ATP-dependent DNA helicase RecG n=1 Tax=Alphaprote... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 36..132
e-value: 3.1E-14
score: 54.6
IPR033454RecG, wedge domainPFAMPF17191RecG_wedgecoord: 3..160
e-value: 1.7E-16
score: 60.2
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 2..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13553contigE-fasciculatus_F_contig13553:2..3585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13553.2644.1mRNA_E-fasciculatus_F_contig13553.2644.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13553 2..3585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13553.2644.1 ID=prot_E-fasciculatus_F_contig13553.2644.1|Name=mRNA_E-fasciculatus_F_contig13553.2644.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=202bp
DALKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSHVADLVEGEV
ATMLLKVVKVQSDPLRRSPKITRVHCVDVAEDKIDIVVFGGSWLCKNYKP
GETKVVSGKVTMDKYSGALVMSSPEVVAPAADLEKVLVIQPTYPLTAGLS
GPSLRSVIALALDQLEGVTQFPPEWIDRETIREHGWPSLREALSAAHSPQ
QE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR033454RecG_wedge