prot_E-fasciculatus_F_contig13548.2638.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13548.2638.1
Unique Nameprot_E-fasciculatus_F_contig13548.2638.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length235
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13548.2638.1 vs. uniprot
Match: D7G1K5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K5_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 2.040e-54
Identity = 128/176 (72.73%), Postives = 135/176 (76.70%), Query Frame = 0 
Query:   60 MGAVMVDDPAVILFAGGIGRGGMVVDSNVDVFAVPLDVADXXXXXXXXXXXXXXXXXXREEAMVDRNVLSLGVARTDMGAGGTRSALFFAGGCGMEDSGDDNEQETHSSGPTIVQDGGXXGD-GVAVDVPPGGDPDVPLLLKNCQATDAVDVFLLGGGVTGRKKEKGSCRFFLQTP 234
            MGAVMVDDPAVILFAGGIGRGGMVVDSNVDVFAVPLDV + XXXXXXXXXXXXXXXXX EE +VDR+VLSLGVARTDMGAGGT SA+FFAGGCGMED GD                  XX   GVAVDVPPG DPDVPLLLKNCQATDAVDVF LG G  G   ++G  +  L  P
Sbjct:    1 MGAVMVDDPAVILFAGGIGRGGMVVDSNVDVFAVPLDVDEDXXXXXXXXXXXXXXXXXXEETLVDRDVLSLGVARTDMGAGGTSSAMFFAGGCGMEDVGDXXXXXXXXXXXXXXXXXXXXXXXGVAVDVPPGADPDVPLLLKNCQATDAVDVFFLGSGGGGDGAQEGKGKLSLLPP 176
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BLAST of mRNA_E-fasciculatus_F_contig13548.2638.1 vs. uniprot
Match: A0A6H5KCH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCH0_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.310e-31
Identity = 68/81 (83.95%), Postives = 71/81 (87.65%), Query Frame = 0 
Query:  137 MGAGGTRSALFFAGGCGMEDSGDDNEQETHSSGPTIVQD-GGXXGDGVAVDVPPGGDPDVPLLLKNCQATDAVDVFLLGGG 216
            MGAGGT SA+FFAGGCGMED GDDN+QET SSGPTIVQD GG    GVAVDVPPG DP+VPLLLKNCQATDAVDVFLLG G
Sbjct:    1 MGAGGTSSAVFFAGGCGMEDVGDDNQQETQSSGPTIVQDRGGESEGGVAVDVPPGADPNVPLLLKNCQATDAVDVFLLGSG 81
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13548.2638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1K5_ECTSI2.040e-5472.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCH0_9PHAE2.310e-3183.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..234
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.718

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13548contigE-fasciculatus_F_contig13548:44..2468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13548.2638.1mRNA_E-fasciculatus_F_contig13548.2638.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13548 2..3266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13548.2638.1 ID=prot_E-fasciculatus_F_contig13548.2638.1|Name=mRNA_E-fasciculatus_F_contig13548.2638.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=235bp
MLLVWIDLLSLAVAADHHAVAASSTKACGRRFLVRDGEASTPDSSPAAGG
LLLSRGRGFMGAVMVDDPAVILFAGGIGRGGMVVDSNVDVFAVPLDVADD
DDDDEDNATGGAAVGGGREEAMVDRNVLSLGVARTDMGAGGTRSALFFAG
GCGMEDSGDDNEQETHSSGPTIVQDGGGGGDGVAVDVPPGGDPDVPLLLK
NCQATDAVDVFLLGGGVTGRKKEKGSCRFFLQTP*
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