prot_E-fasciculatus_F_contig13513.2618.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13513.2618.1
Unique Nameprot_E-fasciculatus_F_contig13513.2618.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length163
Homology
BLAST of mRNA_E-fasciculatus_F_contig13513.2618.1 vs. uniprot
Match: D7FSV8_ECTSI (Sister chromatid cohesion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSV8_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 4.690e-73
Identity = 121/137 (88.32%), Postives = 124/137 (90.51%), Query Frame = 0
Query:    9 QEESIRCICGGAGRDTGDGGEGGVMMLDCDRCHRWFHGHCVGITSQEDCPEEWFCVDCTILRQVSAQKHAHAKRQSMDAASHDLTRELGDEAGSDXXXXXXXGKVDTFEVTDLDVFRQLVLNRLTADDGTSRSAQRS 145
            +EE I CICGGAGRDTG GGEGGVMMLDCDRCHRWFHGHCVGITSQEDCPEEWFCVDCTILRQVSAQKHAHAKRQS+DAASHDLT+ELGDEAGSD       GKV  FEVTDLDVFRQLVLNRLTADDG SRSAQRS
Sbjct:  936 EEERILCICGGAGRDTG-GGEGGVMMLDCDRCHRWFHGHCVGITSQEDCPEEWFCVDCTILRQVSAQKHAHAKRQSLDAASHDLTKELGDEAGSDDEGGVGGGKVVAFEVTDLDVFRQLVLNRLTADDGASRSAQRS 1071          
BLAST of mRNA_E-fasciculatus_F_contig13513.2618.1 vs. uniprot
Match: A0A6H5JLU6_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLU6_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 3.320e-55
Identity = 112/165 (67.88%), Postives = 117/165 (70.91%), Query Frame = 0
Query:    6 CLAQEESIRCICGGAGRDT-GDGGE-GGVMMLDCDRCHRWFHGHCVGITSQEDCPEEWFCVDCTILRQVSAQKHAHAKRQSMDAASHDLTRELGDEAGSDXXXXXXXGKVDTFEVTDLDVFRQLVLNRLTADDGTSRSAQRSSSL-----SSSLSSRHGRSVAVR 163
            CL   + +  + GG    T G GGE GGVMMLDCDRCHRWFHG CVGITSQEDCPEEWFCVDCTILRQV+AQK AHA RQS          E GDEAGSD       GK   FEVTDLDVFRQLVLNRLTADDG SRSAQRS+       S S SSRHGRSVAVR
Sbjct:  936 CLMAMDVLGRVAGGLADITRGTGGEEGGVMMLDCDRCHRWFHGRCVGITSQEDCPEEWFCVDCTILRQVTAQKRAHANRQST---------EFGDEAGSDDEGAGGGGKTVAFEVTDLDVFRQLVLNRLTADDGASRSAQRSAGSAGLGSSPSSSSRHGRSVAVR 1091          
BLAST of mRNA_E-fasciculatus_F_contig13513.2618.1 vs. uniprot
Match: B8BTF2_THAPS (Sister chromatid cohesion protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTF2_THAPS)

HSP 1 Score: 77.0 bits (188), Expect = 2.340e-13
Identity = 41/99 (41.41%), Postives = 54/99 (54.55%), Query Frame = 0
Query:    1 SRGSGCLAQEESI-RCICGGAGRDTGDGGEGGVMMLDCDRCHRWFHGHCVGITSQEDCPEEWFCVDCTILRQVSAQKH--AHAKRQSMDAASHDLTREL 96
            S  SG L  +E I +C CG    DT         M+DCDRCH WFHG C+GIT ++  P+EWFC +CT+   +  Q +  A+  R+S    S D T  L
Sbjct:  838 SMSSGQLEPKEEINKCFCGRGNLDT--------FMVDCDRCHSWFHGSCIGIT-KDTVPDEWFCDECTMQTTIMKQANVFANTNRESNKLTSKDHTHAL 927          
BLAST of mRNA_E-fasciculatus_F_contig13513.2618.1 vs. uniprot
Match: A0A7S3VWS1_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3VWS1_EMIHU)

HSP 1 Score: 76.6 bits (187), Expect = 2.770e-13
Identity = 36/67 (53.73%), Postives = 41/67 (61.19%), Query Frame = 0
Query:   11 ESIRCICGGAGRDTGDGGEGGVMMLDCDRCHRWFHGHCVGITSQED-CPEEWFCVDCTILRQVSAQK 76
            E   C+CG  G D G        MLDCDRCHRWFHG CVGI +QED  P EWFC  C + R V+ Q+
Sbjct:  153 EDATCVCG-RGYDGG-------FMLDCDRCHRWFHGSCVGIEAQEDDLPSEWFCESCQLSRAVTKQR 211          
BLAST of mRNA_E-fasciculatus_F_contig13513.2618.1 vs. uniprot
Match: A0A7S4B8G5_CHRCT (Sister chromatid cohesion protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B8G5_CHRCT)

HSP 1 Score: 76.3 bits (186), Expect = 4.300e-13
Identity = 49/126 (38.89%), Postives = 63/126 (50.00%), Query Frame = 0
Query:   11 ESIRCICGGAGRDTGDGGEGGVMMLDCDRCHRWFHGHCVGI--TSQEDCPEEWFCVDCTILRQVSAQKHAHAKRQSMDAASHDLTRELGDEAGSDXXXXXXXGKVDTFEVTDLDVFRQLVLNRLTA 134
            E   CICG      G  GEG   MLDCD+CHRWFHG CVGI  TS+   PEEWFC  C +   V+ Q+    +  ++        R  GD  G D        ++ T E    +V +QL++N L A
Sbjct:  706 EDASCICG-----EGHKGEG--FMLDCDKCHRWFHGACVGIYPTSEHSVPEEWFCDSCQLSTAVAEQRQRITRLLAL--------RGDGDSNGGDDENSKEIYEMLTSET---EVTKQLLINHLHA 813          
BLAST of mRNA_E-fasciculatus_F_contig13513.2618.1 vs. uniprot
Match: A0A7S1CNW5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNW5_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.990e-12
Identity = 37/73 (50.68%), Postives = 42/73 (57.53%), Query Frame = 0
Query:   20 AGRDTG---DGGEGGVMMLDCDRCHRWFHGHCVGITSQEDCPEEWFCVDCTILRQVSA-QKHAHAKRQSMDAA 88
            AG D G     G  G  MLDCD CHRWFHG CVGI  +E  PE W+C DC +L QV   Q H    R++  AA
Sbjct:   38 AGEDDGCICKRGSDGRFMLDCDTCHRWFHGDCVGIR-EEYAPEAWYCDDCVLLHQVKVVQAHIETVRKTAAAA 109          
BLAST of mRNA_E-fasciculatus_F_contig13513.2618.1 vs. uniprot
Match: A0A7S4RR27_9STRA (Sister chromatid cohesion protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RR27_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.280e-11
Identity = 51/149 (34.23%), Postives = 70/149 (46.98%), Query Frame = 0
Query:    9 QEESIRCICGGAGR-DTGDGGEGGVMMLDCDRCHRWFHGHCVGITSQEDCPEEWFCVDCTILRQVSAQKHA-------HAKRQ-------SMDAASHDLTRELGDEA-GSDXXXXXXXGKVDTFEVTDLDVFRQLVLNRLTADDGTSRS 141
            ++E   C+CG  G  DT         MLDCDRCH WFHG CVG+T ++  P+ W C +CT+   V  Q  A       H KR+       S     H   ++  D A  +D          +  EV D  +FRQL+LN +T    T++S
Sbjct:  489 RKEVNGCLCGRTGLVDT--------FMLDCDRCHAWFHGSCVGVT-KDSLPDVWICDECTLQVMVLEQTQAFVERCSNHQKRRVKGTEEDSQKQKRHKKAKQKKDIAQANDVAGDQTEASDNVPEVDDTHIFRQLLLNYMTHLTETTKS 628          
BLAST of mRNA_E-fasciculatus_F_contig13513.2618.1 vs. uniprot
Match: A0A7S3F1Q1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F1Q1_9EUKA)

HSP 1 Score: 67.4 bits (163), Expect = 2.730e-11
Identity = 35/95 (36.84%), Postives = 49/95 (51.58%), Query Frame = 0
Query:   11 ESIRCICGGAGRDTGDGGEGGVMMLDCDRCHRWFHGHCVGI-----TSQEDCPEEWFCVDCTILRQVSAQKHAHAKRQSM------DAASHDLTR 94
            E  RC CG  G +TG+       MLDCD CHRWFHG CVG+     TS +  P+ WFC +C +   +  Q+   ++  ++      D   H+ TR
Sbjct:   32 EDARCFCG-RGYNTGE------FMLDCDSCHRWFHGVCVGVDTSNDTSDDAMPQSWFCDNCRLSAALKEQRQRISRLLALPESGQSDEEEHEDTR 119          
BLAST of mRNA_E-fasciculatus_F_contig13513.2618.1 vs. uniprot
Match: A0A7S2UG10_9STRA (Sister chromatid cohesion protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UG10_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 8.000e-11
Identity = 48/124 (38.71%), Postives = 59/124 (47.58%), Query Frame = 0
Query:   11 ESIRCICGGAGR-DTGDGGEGGVMMLDCDRCHRWFHGHCVGITSQEDCPEEWFCVDCTILRQVSAQKHAHAKRQSMDAASHDLTRELGDEAGSDXXXXXXXGKVDTFEVTDLDVFRQLVLNRLT 133
            E+ RC CG A   DT         MLDCDRCH WFHG C GI  ++  PE W C +CT+   V  Q  A A R      SH   R    ++G             T +V +  +FRQL+LN LT
Sbjct:  569 ETNRCFCGRATLVDT--------FMLDCDRCHNWFHGSCAGIC-KDSLPEVWICNECTMQIMVLEQTKAFATR-----CSH--RRRSAKKSGKSSSAKNCP----TPQVDETHIFRQLLLNHLT 672          
BLAST of mRNA_E-fasciculatus_F_contig13513.2618.1 vs. uniprot
Match: K0SHJ0_THAOC (Sister chromatid cohesion protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SHJ0_THAOC)

HSP 1 Score: 68.2 bits (165), Expect = 2.770e-10
Identity = 38/79 (48.10%), Postives = 43/79 (54.43%), Query Frame = 0
Query:    9 QEESIRCICGGAGRDTGDGGEGGVMMLDCDRCHRWFHGHCVGITSQEDCPEEWFCVDCTILRQVSAQKHAHAKRQSMDA 87
            +EE  RC CG   RD          MLDCDRCH WFHG CVGIT ++  PE W C DCT+  Q S    A A  Q  D+
Sbjct:  704 KEEVNRCFCG---RDLD------TFMLDCDRCHSWFHGSCVGIT-KDAVPETWVCDDCTL--QGSMLDQAKAFTQGKDS 770          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13513.2618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSV8_ECTSI4.690e-7388.32Sister chromatid cohesion protein n=1 Tax=Ectocarp... [more]
A0A6H5JLU6_9PHAE3.320e-5567.88PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
B8BTF2_THAPS2.340e-1341.41Sister chromatid cohesion protein n=1 Tax=Thalassi... [more]
A0A7S3VWS1_EMIHU2.770e-1353.73Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A7S4B8G5_CHRCT4.300e-1338.89Sister chromatid cohesion protein (Fragment) n=1 T... [more]
A0A7S1CNW5_9STRA2.990e-1250.68Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S4RR27_9STRA1.280e-1134.23Sister chromatid cohesion protein n=6 Tax=Ditylum ... [more]
A0A7S3F1Q1_9EUKA2.730e-1136.84Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S2UG10_9STRA8.000e-1138.71Sister chromatid cohesion protein (Fragment) n=1 T... [more]
K0SHJ0_THAOC2.770e-1048.10Sister chromatid cohesion protein n=1 Tax=Thalassi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 14..67
e-value: 3.2E-6
score: 36.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 6..91
e-value: 7.6E-15
score: 56.2
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 14..67
e-value: 2.8E-9
score: 36.7
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 12..69
score: 9.072
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 15..66
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 7..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13513contigE-fasciculatus_F_contig13513:358..3506 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13513.2618.1mRNA_E-fasciculatus_F_contig13513.2618.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13513 358..3507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13513.2618.1 ID=prot_E-fasciculatus_F_contig13513.2618.1|Name=mRNA_E-fasciculatus_F_contig13513.2618.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=163bp
SRGSGCLAQEESIRCICGGAGRDTGDGGEGGVMMLDCDRCHRWFHGHCVG
ITSQEDCPEEWFCVDCTILRQVSAQKHAHAKRQSMDAASHDLTRELGDEA
GSDDEGGGGGGKVDTFEVTDLDVFRQLVLNRLTADDGTSRSAQRSSSLSS
SLSSRHGRSVAVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR001965Znf_PHD