prot_E-fasciculatus_F_contig1351.2617.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1351.2617.1
Unique Nameprot_E-fasciculatus_F_contig1351.2617.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length336
Homology
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Match: D8LMX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMX3_ECTSI)

HSP 1 Score: 435 bits (1119), Expect = 5.230e-149
Identity = 301/335 (89.85%), Postives = 305/335 (91.04%), Query Frame = 0
Query:    1 MKVIKAAKGATGGVVGXXXXXXXXSSDSSAATTKRLAAGLPGVSPAEISNHESWYRLRGVFLAKKRAEKQRHALKLEELVSWGKKALETLRNEERESAARAIEQEERERRRTELDNLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYERKRSAVALYHASLQELRARETDACEAAARAEGADRAQRVPVNRKRVGFRQEKARQKXXXXXXXXXXXXXXXXXRLQVLQRLAASVPYAEACANAEAKLDHITAATAAHFDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGSTSAHVAVMRAAGPRAPAPYGQHAE 335
            MKVIKAAKGATG    XXXXX   SSDSS ATTKRL AGLPGV PAEISNHESWYRLRGVFLAKKRAEKQRHA K+EELV WGKKALETLRNEERESAARAIEQEERERRR ELDNLL      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RKRSAVA YHASLQELRARETDACEAAARAE A+RAQRVPVNRKRVGFRQEKAR+K  XXXXXXXXXXXXXX R+QVLQRLAASVPYAEACANAEAKLDHIT ATAAHFDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSG  SAHVAVMRAAGPRAPAPYGQHAE
Sbjct:  102 MKVIKAAKGATGXXXXXXXXXLGGSSDSSGATTKRLVAGLPGVFPAEISNHESWYRLRGVFLAKKRAEKQRHARKVEELVIWGKKALETLRNEERESAARAIEQEERERRRKELDNLLREQGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRSAVAQYHASLQELRARETDACEAAARAEEAERAQRVPVNRKRVGFRQEKAREKQEXXXXXXXXXXXXXXKRMQVLQRLAASVPYAEACANAEAKLDHITVATAAHFDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGCKSAHVAVMRAAGPRAPAPYGQHAE 436          
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Match: A0A7S3HHH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHH1_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 7.640e-16
Identity = 41/82 (50.00%), Postives = 59/82 (71.95%), Query Frame = 0
Query:  233 RLQVLQRLAASVPYAEACANAEAKLDHITAATAAHFDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGSTSA 314
            R+++L R+AA VPY +A  +AE+KLDHITAA  AH + + P ++SRGH P+ G+  G V +D+RFRL   L  +GV+GS +A
Sbjct:   47 RIEMLNRIAAQVPYYDAIQDAESKLDHITAAAKAH-EYYAPDEQSRGHLPLNGFTDGRVIQDSRFRLAEALHRSGVAGSLAA 127          
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Match: A0A7S2BDN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BDN4_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 8.160e-9
Identity = 50/133 (37.59%), Postives = 68/133 (51.13%), Query Frame = 0
Query:  192 ADRAQRVPVNRKRVGFRQEKARQKXXXXXXXXXXXXXXXXXRLQVLQRLAASVPYAEACANAEAKLDHITAATAAHFDQ--FLPHDRSRG-HCPMLGYNTGEVFKDARFRLGLYLREAGVSGSTSAHVAVMRA 321
            A+R ++  ++R RV +R  K  QK                 R + +  +AASVPYAEA A A++ L   TAA    FDQ  F   D  R  H    G++  ++F D RF+LG  L  AGV+GS +A  AV RA
Sbjct:   25 AERLKQAEIDRSRVSYRDSKRTQKLNSIEQLRWEAAKKEAARHRAIAAIAASVPYAEAIAQAQSDLTKTTAA----FDQAVFDAADFHRNPHSVNNGFSDKKLFADPRFKLGYALHAAGVNGSAAAASAVQRA 153          
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Match: A0A7S2WUK3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUK3_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.490e-7
Identity = 48/119 (40.34%), Postives = 61/119 (51.26%), Query Frame = 0
Query:  201 NRKRVGFRQEKARQKXXXXXXXXXXXXXXXXXRLQVLQRLAASVPYAEACANAEAKLDHITAATA-AHFDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGSTSAHVAV 318
            N +RV +R  K  QK                 RL+ + R+AASVPYAEA A A+A L   TAA A A FD      R   H  + G++  ++F D RF+LG  L  AGVS S +A  AV
Sbjct:   76 NLERVSYRDSKRLQKLDALREMKWKAEQRERTRLEAIARIAASVPYAEAIAQAKADLLKPTAAVANAIFDG--ESFRQNPHSIVQGFSDKKLFSDKRFKLGYALHSAGVSHSAAAASAV 192          
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Match: A0A7S2SUG3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUG3_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 5.850e-7
Identity = 48/119 (40.34%), Postives = 61/119 (51.26%), Query Frame = 0
Query:  201 NRKRVGFRQEKARQKXXXXXXXXXXXXXXXXXRLQVLQRLAASVPYAEACANAEAKLDHITAATA-AHFDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGSTSAHVAV 318
            N +RV +R  K  QK                 RL+ + R+AASVPYAEA A A+A L   TAA A A FD      R   H  + G++  ++F D RF+LG  L  AGVS S +A  AV
Sbjct:  248 NLERVSYRDSKRLQKLDALREMKWKAEQRERTRLEAIARIAASVPYAEAIAQAKADLLKPTAAVANAIFDG--ESFRQNPHSIVQGFSDKKLFSDKRFKLGYALHSAGVSHSAAAASAV 364          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LMX3_ECTSI5.230e-14989.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3HHH1_9STRA7.640e-1650.00Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2BDN4_9STRA8.160e-937.59Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2WUK3_9STRA1.490e-740.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SUG3_9STRA5.850e-740.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 207..239
NoneNo IPR availableCOILSCoilCoilcoord: 84..134
NoneNo IPR availableCOILSCoilCoilcoord: 141..161
NoneNo IPR availablePANTHERPTHR21549:SF1COILED-COIL DOMAIN-CONTAINING PROTEIN 148coord: 29..326
IPR039902Coiled-coil domain-containing protein CCDC148/CCDC112PANTHERPTHR21549MUTATED IN BLADDER CANCER 1coord: 29..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1351contigE-fasciculatus_F_contig1351:12931..15627 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1351.2617.1mRNA_E-fasciculatus_F_contig1351.2617.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1351 12931..17553 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1351.2617.1 ID=prot_E-fasciculatus_F_contig1351.2617.1|Name=mRNA_E-fasciculatus_F_contig1351.2617.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=336bp
MKVIKAAKGATGGVVGGAGGYLGGSSDSSAATTKRLAAGLPGVSPAEISN
HESWYRLRGVFLAKKRAEKQRHALKLEELVSWGKKALETLRNEERESAAR
AIEQEERERRRTELDNLLREQGKARERRDKESREREEKALLDRVVRETEE
AERKALEYERKRSAVALYHASLQELRARETDACEAAARAEGADRAQRVPV
NRKRVGFRQEKARQKQEEHERREQEAKELEEKRLQVLQRLAASVPYAEAC
ANAEAKLDHITAATAAHFDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLG
LYLREAGVSGSTSAHVAVMRAAGPRAPAPYGQHAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039902CCDC148/CCDC112