mRNA_E-fasciculatus_F_contig1351.2617.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Match: D8LMX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMX3_ECTSI) HSP 1 Score: 613 bits (1581), Expect = 1.610e-217 Identity = 392/435 (90.11%), Postives = 399/435 (91.72%), Query Frame = 1
Query: 4 RVRRSWRETDFQICKPIALTSTSLGLLSRNS*PRVAADPKKASWQSCLFRLQALEAEQDSTLAALRSDFLRDAAGSTSAGSVEAALDQNGGWPSDRHFRFMKVIKAAKGATGGVVXXXXXYLGGSSDSSAATTKRLAAGLPGVSPAEISNHESWYRLRGVFLAKKRAEKQRHALKLEELVSWGKKALETLRNEERESAARAIEQEERERRRTELDNLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYERKRSAVALYHASLQELRARETDACEAAARAEGADRAQRVPVNRKRVGFRQEKARQKXXXXXXXXXXXXXXXXXRLQVLQRLAASVPYAEACANAEAKLDHITAATAAHFDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGSTSAHVAVMRAAGPRAPAPYGQHAE 1308
RVR++WRETDFQICKP ALTS SLGLLSRNS PRV A PKKASWQSCLFRLQALEA+ STL ALRSDFLRDAAGSTSAGS EAALDQNGGWPSDRHFRFMKVIKAAKGATG XXXXX LGGSSDSS ATTKRL AGLPGV PAEISNHESWYRLRGVFLAKKRAEKQRHA K+EELV WGKKALETLRNEERESAARAIEQEERERRR ELDNLL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RKRSAVA YHASLQELRARETDACEAAARAE A+RAQRVPVNRKRVGFRQEKAR+K XXXXXXXXXXXXXX R+QVLQRLAASVPYAEACANAEAKLDHIT ATAAHFDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSG SAHVAVMRAAGPRAPAPYGQHAE
Sbjct: 2 RVRKNWRETDFQICKPTALTSKSLGLLSRNSCPRVPAGPKKASWQSCLFRLQALEAQHVSTLTALRSDFLRDAAGSTSAGSAEAALDQNGGWPSDRHFRFMKVIKAAKGATGXXXXXXXXXLGGSSDSSGATTKRLVAGLPGVFPAEISNHESWYRLRGVFLAKKRAEKQRHARKVEELVIWGKKALETLRNEERESAARAIEQEERERRRKELDNLLREQGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRSAVAQYHASLQELRARETDACEAAARAEEAERAQRVPVNRKRVGFRQEKAREKQEXXXXXXXXXXXXXXKRMQVLQRLAASVPYAEACANAEAKLDHITVATAAHFDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGCKSAHVAVMRAAGPRAPAPYGQHAE 436
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Match: A0A7S3HHH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHH1_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.760e-15 Identity = 41/82 (50.00%), Postives = 59/82 (71.95%), Query Frame = 1
Query: 1000 RLQVLQRLAASVPYAEACANAEAKLDHITAATAAHFDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGSTSA 1245
R+++L R+AA VPY +A +AE+KLDHITAA AH + + P ++SRGH P+ G+ G V +D+RFRL L +GV+GS +A
Sbjct: 47 RIEMLNRIAAQVPYYDAIQDAESKLDHITAAAKAH-EYYAPDEQSRGHLPLNGFTDGRVIQDSRFRLAEALHRSGVAGSLAA 127
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Match: A0A7S2BDN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BDN4_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.280e-8 Identity = 50/133 (37.59%), Postives = 68/133 (51.13%), Query Frame = 1
Query: 877 ADRAQRVPVNRKRVGFRQEKARQKXXXXXXXXXXXXXXXXXRLQVLQRLAASVPYAEACANAEAKLDHITAATAAHFDQ--FLPHDRSRG-HCPMLGYNTGEVFKDARFRLGLYLREAGVSGSTSAHVAVMRA 1266
A+R ++ ++R RV +R K QK R + + +AASVPYAEA A A++ L TAA FDQ F D R H G++ ++F D RF+LG L AGV+GS +A AV RA
Sbjct: 25 AERLKQAEIDRSRVSYRDSKRTQKLNSIEQLRWEAAKKEAARHRAIAAIAASVPYAEAIAQAQSDLTKTTAA----FDQAVFDAADFHRNPHSVNNGFSDKKLFADPRFKLGYALHAAGVNGSAAAASAVQRA 153
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Match: A0A7S2WUK3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUK3_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 2.350e-7 Identity = 48/119 (40.34%), Postives = 61/119 (51.26%), Query Frame = 1
Query: 904 NRKRVGFRQEKARQKXXXXXXXXXXXXXXXXXRLQVLQRLAASVPYAEACANAEAKLDHITAATA-AHFDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGSTSAHVAV 1257
N +RV +R K QK RL+ + R+AASVPYAEA A A+A L TAA A A FD R H + G++ ++F D RF+LG L AGVS S +A AV
Sbjct: 76 NLERVSYRDSKRLQKLDALREMKWKAEQRERTRLEAIARIAASVPYAEAIAQAKADLLKPTAAVANAIFDG--ESFRQNPHSIVQGFSDKKLFSDKRFKLGYALHSAGVSHSAAAASAV 192
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Match: W2PTX2_PHYPN (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=W2PTX2_PHYPN) HSP 1 Score: 63.2 bits (152), Expect = 5.590e-7 Identity = 92/402 (22.89%), Postives = 161/402 (40.05%), Query Frame = 1
Query: 103 RVAADPKKASWQSCLFRLQALEAEQD---------STLAALRSDFLRDAAGSTSAGSVEAALDQNGGWPSDRHFRFMKVIKAAKGATGGVVXXXXXYLGGSSDSSAATTKRLAAGLPGVSPAEISNHESWYRLRGVFLAKKRAEKQRHALKLEELVSWGKKALETLRNEERESAARAIEQEERERRRTELDNLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYERKRSAVALYHA--SLQELRARETDACEAAARAEGADRAQRVPVNRKRVGFRQEKARQKXXXXXXXXXXXXXXXXXRLQVLQRLAASVPYAEACANAEA---KLDHITAATAAHFD---QFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGSTSAHVAV 1257
R+AA + + +C + LE + LA F+ A+ S +AGS+EAA + GGW RF+KV+++ + G Y +LA LP V EI H +++ + K++ ++ KLEEL + T +E+E + + + +++ + + X ++++++ AV Y +LQ++ + E R G +RA + VN +RV +R + ++K RL L L + PYA+ AN + +T A A+ + + LP + G P GY+ +FK+ARF+LG+ LR AG++ S A A+
Sbjct: 232 RIAAMLEASGGNNCSDEMLKLEISNELRKVFSHLQEDLAEYEEGFINAASASDAAGSIEAASSKGGGWSEANEERFLKVLRSYENKHGAGKKPQLLY------------DQLALVLPNVPLIEIKKHVKFHQHYRFYQEKRKDRQREFQRKLEELQNGATTRFRTAMEQEQERVRKLQQLHDMQQQCDQRHEQISQWRVTKEAKERIEKQQREIEQLLENQKXKEEELQWRRKHDQQKIAVDEYKKGKTLQKMADEKLTMEEEQRR--GEERALQSVVNAERVQYRHHEFQRKMEEMKQEELHKAELEGQRLVKLNELKETTPYAQIIANIAPDPERTRQVTVAFRANVEAAQEGLPVTET-GLFPSHGYDCETLFKNARFKLGIALRNAGLNSSDYARQAL 618
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Match: A0A7S2SUG3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUG3_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.070e-6 Identity = 48/119 (40.34%), Postives = 61/119 (51.26%), Query Frame = 1
Query: 904 NRKRVGFRQEKARQKXXXXXXXXXXXXXXXXXRLQVLQRLAASVPYAEACANAEAKLDHITAATA-AHFDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGSTSAHVAV 1257
N +RV +R K QK RL+ + R+AASVPYAEA A A+A L TAA A A FD R H + G++ ++F D RF+LG L AGVS S +A AV
Sbjct: 248 NLERVSYRDSKRLQKLDALREMKWKAEQRERTRLEAIARIAASVPYAEAIAQAKADLLKPTAAVANAIFDG--ESFRQNPHSIVQGFSDKKLFSDKRFKLGYALHSAGVSHSAAAASAV 364
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Match: A0A6G0WGD9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGD9_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 3.910e-6 Identity = 93/386 (24.09%), Postives = 143/386 (37.05%), Query Frame = 1
Query: 118 PKKASWQSCLFRLQALEAEQDSTLAALRSDFLRDAAGSTSAGSVEAALDQNGGWPSDRHFRFMKVIKAAKGATGGVVXXXXXYLGGSSDSSAATTKRLAAGLPGVSPAEISNHESWYRLRGVFLAKKRAEKQRHALKLEELVSWGKKALETLRNEERESAARAIEQEERERRRTELDNLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYERKRSAVALYHASLQELRARETDACEAAARAEGADRAQRVP-VNRKRVGFRQEKARQKXXXXXXXXXXXXXXXXXRLQVLQRLAASVPYAEACANAEAKLDHITAATAAHFDQFLPHDRS-----RGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGSTSAHVAV 1257
P A L + Q LE D L + DF RD S+ A+ + GGW D H RF+KV K + G +D A R+A + P EI H+ W+R + K+ + E L+ K A+ + + + R+ E +R + L + E+E K+ + L H Q++ + EA A A+ +++ +N RV FR E QK + ++L+ + PYAE A EA + AT A G P GY+T ++FKDARF+LGL LR+AG++ + A A+
Sbjct: 232 PDPALKLDLLQQFQVLEIAMDDDLRRYQMDFERD----HGLPSLAEAMSKTGGWSPDDHDRFLKVFKECEPK------------GIRND---AFITRVAGEMEKTIP-EIRQHDQWFRTLRRWNQLKQDRTSEQTRRRESLIESAKAAISSAKEAADKEKLRSEEMTQRLADQELLHAKVARFRGKRSAQADVAAHQAEIAQLEAEAVIQAAERKRQKEHELKKKLL-LTHKDWQQVEKLVKEQAEAERIAAEAEAQRQLDAINATRVAFRTEVYEQKCELQKQKAIQKVQEEAEKEKILEAIKQEAPYAEKIAQIEADPNRTRQATVAFKANVEAAQEGLGIHETGLFPSHGYDTDKLFKDARFKLGLALRDAGLASTEYAKKAM 596
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Match: A0A6A3YKD4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YKD4_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 9.070e-5 Identity = 96/407 (23.59%), Postives = 158/407 (38.82%), Query Frame = 1
Query: 145 LFRLQALEA------EQDSTLAALRSDFLRDAAGSTSAGSVEAALDQNGGWPSDRHFRFMKVIKAAKGATGGVVXXXXXYLGGSSDSSAATTKRLAAGLPGVSPAEISNHESWYR-LRGVFLAKKRAEKQRHALKLEELVSWGKKALETLRNEERESAARAIEQEERERRRTEL-----------DNLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYERKRSAVALYHA------------SLQELRARETDACEAAARAEGADRAQRVPVNRKRVGFRQEKARQKXXXXXXXXXXXXXXXXXRLQVLQRLAASVPYAEACANAEAKLDHITAATAAH------FDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGSTSAHVAV 1257
+ R++ LEA E LA DF+ A+ + +AGSVEAA ++GGW RF+KV+++ + G Y ++ LP + +I H +++ LR F KR ++QR ++ LE L++E AIEQE++ ++ + +L+ ++++++ AV Y S++E + RE A+RA + VN +RV +R + ++K RL L L PYA+ AN + TAA + LP + + G P GY+ +FK+ARF+LG+ LR AG+S S A A+
Sbjct: 319 MLRIEMLEAFRNVFAEFRHDLAQYEKDFVSAASSTDAAGSVEAATSKSGGWSDTDEERFLKVLRSYEKKHGTGKKPQLLY------------DQITLVLPTIPVPDIKKHVRFHQHLR--FYQDKRKDRQREL----------QRGLEVLQSEAATKFGIAIEQEQQRLQKLQQFSVMQEQCEQRHDLVSKWRVTKEAKERIERQQREIEAILEAQLQQEEALRWKRKHDQQKLAVDEYKKDKVLRKMADEKLSIEEEQQRE------------AERALQSAVNVERVQYRHHEFQRKLEDMKLEELHKAQLEEQRLAQLNELKEKTPYAQIIANIAPDFERTRQETAAFRSNVEAAQEGLPLNET-GLFPSHGYDCNTLFKNARFKLGIALRNAGLSSSEYARQAL 688
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Match: D0N6H1_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N6H1_PHYIT) HSP 1 Score: 55.8 bits (133), Expect = 9.550e-5 Identity = 114/402 (28.36%), Postives = 175/402 (43.53%), Query Frame = 1
Query: 103 RVAADPKKASWQSC---LFRLQALEAEQ------DSTLAALRSDFLRDAAGSTSAGSVEAALDQNGGWPSDRHFRFMKVIKAAKGATGGVVXXXXXYLGGSSDSSAATTKRLAAGLPGVSPAEISNHESWYRLRGVFLAKKRAEKQRHALKLEELVSWGKKALETLRNEERESAARAIEQEERERRRTELDNLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYERKRSAVALYHAS--LQELRARETDACEAAARAEGADRAQRVPVNRKRVGFRQEKARQKXXXXXXXXXXXXXXXXXRLQVLQRLAASVPYAEACANAEAKLDHITAATAAH------FDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGSTSAHVAV 1257
R+AA A C + RL+ +A Q + LA +F+ A+ S +AG++EAA ++GGW F+ V+++ + G Y +LA LP V EI H +++ F K++ ++ K++EL S +E+E R E E +++ XXXXXXXXXXXXXXXXXXX +++++ AV Y LQ++ A E E R E +RA + VN +RV +R ++ ++K RL L L + PYA+ AN + TAA + LP + G P GY+ +FK+ARF+LG+ LR AG++ S A A+
Sbjct: 63 RIAAMLDAAGANECADEMLRLEIYQAFQKVFDQLEQDLAEDEREFVSAASASDAAGNIEAASSRSGGWNEAEEELFLTVLRSYEKKQGAGKNSLLLY------------DQLALVLPTVPLLEIKKHVKFHQHLRFFQEKRKDRQRAFKRKVDELQSKASCRFRLSAEQEKERVRRLQELSEMQQQCXXXXXXXXXXXXXXXXXXXXXXXXXXIEQLLETQRQREGEVQWQRRHDQQKYAVDEYKKGKILQKI-AEENRTMEEEQRRER-ERALQSVVNAERVQYRHDELQRKIDELKHQELDQARLEEQRLARLNELKETTPYAQIVANITPDPERTRQETAAFRANVEATQEGLPITET-GLFPSHGYDCETLFKNARFKLGIALRNAGLNSSEYARQAL 449 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1351.2617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1351.2617.1 >prot_E-fasciculatus_F_contig1351.2617.1 ID=prot_E-fasciculatus_F_contig1351.2617.1|Name=mRNA_E-fasciculatus_F_contig1351.2617.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=336bp MKVIKAAKGATGGVVGGAGGYLGGSSDSSAATTKRLAAGLPGVSPAEISNback to top mRNA from alignment at E-fasciculatus_F_contig1351:12931..17553- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1351.2617.1 ID=mRNA_E-fasciculatus_F_contig1351.2617.1|Name=mRNA_E-fasciculatus_F_contig1351.2617.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4623bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1351:12931..17553- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1351:12931..17553- >mRNA_E-fasciculatus_F_contig1351.2617.1 ID=mRNA_E-fasciculatus_F_contig1351.2617.1|Name=mRNA_E-fasciculatus_F_contig1351.2617.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2016bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1351:12931..17553- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |