prot_E-fasciculatus_F_contig13508.2614.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13508.2614.1
Unique Nameprot_E-fasciculatus_F_contig13508.2614.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length320
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13508.2614.1 vs. uniprot
Match: A0A6H5KSG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG1_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 2.000e-107
Identity = 238/313 (76.04%), Postives = 247/313 (78.91%), Query Frame = 0 
Query:    1 RLELATAYPAVGEA-GGXXXXXCSGSSGVPYPRPASGSLRPSSSSNNPYDARGHVGRSSAAAADXXXX-SRRWAAQGEYEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----SFGVEDLEEEGVAGDGGGGPAPVGAAAKGRNSYALLGGRQSDRPLSATAAA----------------DWLSAGEDDYRGGAG-WRDWTAAAAGVGASPEAAGAFSAPGSIRSGAAATKFSGGDMFGLGEAALGVPAHDRRAEAAAAAARGAPGRGLLEGGGVYGXXXXXXXAPRRSLGMDRGALPEALAGTLDHI 289
            RLE +TAYPAVGE+ GGXXXXXCSGSSGVPYPRPASGSLRP SSS NPYDAR H GRSSAAA +     SRRW A+GEYEG          XXXXXXXXXXXXXXXXXXXXXX     SFGVEDLEE+GV  DG  GPAPVGAA K R+SYALLGGRQS+RPLSATAAA                DWLSAGEDDYRGGA  WRDWTA A  VGA+PEAAGAFSAPGS RSGAAATKFSGGDMFGLGEAALG PAH RR EA AAA RGAPGRGLLEGGGVYG   XXX APRRSL +DRGALPEALAGTLDHI
Sbjct:  311 RLETSTAYPAVGESSGGXXXXXCSGSSGVPYPRPASGSLRPPSSSRNPYDARDHAGRSSAAAGEAAAAASRRWTARGEYEGWGKHQPPLPPXXXXXXXXXXXXXXXXXXXXXXXXXXHSFGVEDLEEDGVVDDGPEGPAPVGAAEKERDSYALLGGRQSERPLSATAAAATAALAAAPAIRTGAADWLSAGEDDYRGGAAVWRDWTAPAPAVGAAPEAAGAFSAPGSFRSGAAATKFSGGDMFGLGEAALGGPAHGRRGEAGAAA-RGAPGRGLLEGGGVYGTGGXXXGAPRRSLEVDRGALPEALAGTLDHI 622
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BLAST of mRNA_E-fasciculatus_F_contig13508.2614.1 vs. uniprot
Match: D8LSH2_ECTSI (Lissencephaly protein 1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH2_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 1.630e-70
Identity = 148/190 (77.89%), Postives = 153/190 (80.53%), Query Frame = 0 
Query:  117 DLEEEGVAGDGGGGPAPVGAAAKGRNSYALLGGRQSDRPLSATAAA----------------DWLSAGEDDYRGG-AGWRDWTAAAAGVGASPEAAGAFSAPGSIRSGAAATKFSGGDMFGLGEAALGVPAHDRRAEAAAAAARGAPGRGLLEGGGVYGXXXXXXXAPRRSLGMDRGALPEALAGTLDHI 289
            DLEE+GVA DG GGPAPVGAAAK R+SY LLGGRQS+RPLSATAAA                DWLSAGEDDYRGG A WRDWTA A  VGA+PEAAGA SAPGS RSGAAATKFSGGDMFGLGEAALG PAH RR   AAAA RGAPGRGLLEGGGV G  XXXXXAPRRSL +DRGALPEALAGTLDHI
Sbjct:  452 DLEEDGVADDGVGGPAPVGAAAKERDSYELLGGRQSERPLSATAAAGAAALAAAPAIRTAAADWLSAGEDDYRGGGAVWRDWTAPAPAVGAAPEAAGAISAPGSFRSGAAATKFSGGDMFGLGEAALGGPAHGRRG-GAAAAVRGAPGRGLLEGGGVCGTGXXXXXAPRRSLEVDRGALPEALAGTLDHI 640
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13508.2614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KSG1_9PHAE2.000e-10776.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSH2_ECTSI1.630e-7077.89Lissencephaly protein 1-like n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13508contigE-fasciculatus_F_contig13508:2666..3625 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13508.2614.1mRNA_E-fasciculatus_F_contig13508.2614.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13508 2665..3625 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13508.2614.1 ID=prot_E-fasciculatus_F_contig13508.2614.1|Name=mRNA_E-fasciculatus_F_contig13508.2614.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=320bp
RLELATAYPAVGEAGGGGGGSCSGSSGVPYPRPASGSLRPSSSSNNPYDA
RGHVGRSSAAAADAAAASRRWAAQGEYEGEEKQRPPPPPLPSSPQQRQRQ
RQQLQQQQQQRSFGVEDLEEEGVAGDGGGGPAPVGAAAKGRNSYALLGGR
QSDRPLSATAAADWLSAGEDDYRGGAGWRDWTAAAAGVGASPEAAGAFSA
PGSIRSGAAATKFSGGDMFGLGEAALGVPAHDRRAEAAAAAARGAPGRGL
LEGGGVYGAGGGGGGAPRRSLGMDRGALPEALAGTLDHIXXXXVDEDRRG
SRAAPYPDRGQASAGGEGWG
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