prot_E-fasciculatus_F_contig13424.2570.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13424.2570.1
Unique Nameprot_E-fasciculatus_F_contig13424.2570.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length306
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13424.2570.1 vs. uniprot
Match: A0A6H5JG15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG15_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 2.480e-108
Identity = 212/302 (70.20%), Postives = 220/302 (72.85%), Query Frame = 0 
Query:    5 PSRGTGEVSATEQAFRPLTAEGRLRQLEAENLRLRFRVADLEGQVSVMEDELDRRGVARPMPTDANGINNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGTDGPLLSPRGRGYLARLVLEVCSEIEDSKKKAATEAKAKGGASISTVTTGGEGRMASRSRSIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASERSSGMTMSMSSLSSPSHGSHLPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFRCV 306
            P RG  EVSATEQAF+PLT EGRLRQLEAENLRLRFRVADLEGQVSVMEDELDRRGVARPM  DAN  +N                                            XXXXXXX                   M  DGPLLSPRGRGYLARLVLEVCSEIEDS KKAATEAKAKGGAS +TV+T GEG + SR RSIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASERSSGM+MSMSSLSSP+HG  LPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFR +
Sbjct:  438 PGRGAAEVSATEQAFQPLTVEGRLRQLEAENLRLRFRVADLEGQVSVMEDELDRRGVARPMIADANSSSNTESCRTGNAGTAVVASAGDNSNASPCRVKVEATGAAKTVKAAAAXXXXXXXSPKSRGVEGQGGGEAGAG-MVNDGPLLSPRGRGYLARLVLEVCSEIEDS-KKAATEAKAKGGASTNTVSTRGEG-ITSRPRSIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASERSSGMSMSMSSLSSPAHGGSLPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFRLM 736
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BLAST of mRNA_E-fasciculatus_F_contig13424.2570.1 vs. uniprot
Match: D7G4K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K0_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 3.980e-100
Identity = 205/305 (67.21%), Postives = 209/305 (68.52%), Query Frame = 0 
Query:    5 PSRGTGEVSATEQAFRPLTAEGRLRQLEAENLRLRFRVADLEGQVSVMEDELDRRGVARPMPTDANGINNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGTDGPLLSPRGRGYLARLVLEVCSEIEDSKKKAATEAKAKGGASISTVTTG---GEGRMASRSRSIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASERSSGMTMSMSSLSSPSHGSHLPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFRCV 306
            P R TGEVSATEQA +PLT EGRLRQLEAENLRLRFRVADLEGQVSVMEDELDRRGVARPMP D N  +N                                          XXXXXXXXX                      DGPLLSPRGRGYLARLVLEVCSEIEDS KKAATEAK                GEG +ASR RSIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASER SGM MSMSSLSSP+HG  LPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFR V
Sbjct:  226 PGRATGEVSATEQASQPLTVEGRLRQLEAENLRLRFRVADLEGQVSVMEDELDRRGVARPMPADPNSSSNAESCRTGNAGTAVVASADDKSNASACRVKVEATGAAKTVKAAXXXXXXXXXPKSRGVEGEGGGEAGAGIV--NDGPLLSPRGRGYLARLVLEVCSEIEDS-KKAATEAKXXXXXXXXXXXXXXXXGEG-IASRPRSIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASERGSGMAMSMSSLSSPAHGGSLPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPASFFRLV 526
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13424.2570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JG15_9PHAE2.480e-10870.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4K0_ECTSI3.980e-10067.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13424contigE-fasciculatus_F_contig13424:63..3217 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13424.2570.1mRNA_E-fasciculatus_F_contig13424.2570.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13424 63..3217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13424.2570.1 ID=prot_E-fasciculatus_F_contig13424.2570.1|Name=mRNA_E-fasciculatus_F_contig13424.2570.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=306bp
GGGGPSRGTGEVSATEQAFRPLTAEGRLRQLEAENLRLRFRVADLEGQVS
VMEDELDRRGVARPMPTDANGINNNNTDSDSYRTGNASCTAGANADDKSN
ANANPGRVKVEAARTVTAAAAAAATTSPKSRGVEGEGGGEGGAGMGTDGP
LLSPRGRGYLARLVLEVCSEIEDSKKKAATEAKAKGGASISTVTTGGEGR
MASRSRSIPHSERLCKVLPKVMETAIRGVKDLDEQVFEQMMRTASERSSG
MTMSMSSLSSPSHGSHLPLGTPARRLSSCVVARDGGGEFFAQSPAPGRPA
SFFRCV
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