mRNA_E-fasciculatus_F_contig13393.2541.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13393.2541.1 vs. uniprot
Match: D8LC27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC27_ECTSI) HSP 1 Score: 205 bits (522), Expect = 2.720e-59 Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 3
Query: 3 QPLAKNGMAATLALLRPSGVLNEKFHRSGRAKDARKHHGEADETREDRESGAKLEYRDEWGREITRKEAFRNLCYKFHGYGSGKKKQEKRLKTVEEEKKKERAMDLQRLK 332
QPLAKNGMAATLALLRPSGVLNEKFHRSGRAKDARKHHGEA+ETREDRESGAKLEYRDEWGREITRKEAFRNLCYKFHGYGSGKKKQEKRLK VEEEKKKERAMDLQRLK
Sbjct: 789 QPLAKNGMAATLALLRPSGVLNEKFHRSGRAKDARKHHGEAEETREDRESGAKLEYRDEWGREITRKEAFRNLCYKFHGYGSGKKKQEKRLKLVEEEKKKERAMDLQRLK 898
BLAST of mRNA_E-fasciculatus_F_contig13393.2541.1 vs. uniprot
Match: A0A836C9M6_9STRA (SART-1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9M6_9STRA) HSP 1 Score: 104 bits (260), Expect = 7.810e-24 Identity = 59/106 (55.66%), Postives = 76/106 (71.70%), Query Frame = 3
Query: 3 QPLAKNGMAATLALLRPSGVLNEKFHRSGRAKDARKHHGEADETREDRESGAKLEYRDEWGREITRKEAFRNLCYKFHGYGSGKKKQEKRLKTVEEEKKKERAMDL 320
QPL ++ MAA L+LL+ SG L K +GRAKD R+ GEA + KLEYRDE+GR++TR EAFR L Y+FHGYG GKKKQEKRLK ++E++ +ERA D+
Sbjct: 671 QPLVRSSMAAALSLLQQSGDLKHKTELAGRAKDKREFAGEAPDDDGSGAGAVKLEYRDEFGRQLTRAEAFRQLNYQFHGYGPGKKKQEKRLKALQEQRMRERAADV 776
BLAST of mRNA_E-fasciculatus_F_contig13393.2541.1 vs. uniprot
Match: A0A6A5ABK5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABK5_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.050e-19 Identity = 53/99 (53.54%), Postives = 71/99 (71.72%), Query Frame = 3
Query: 3 QPLAKNGMAATLALLRPSGVLNE--KFHRSGRAKDARKHHGEADETREDRESGAKLEYRDEWGREITRKEAFRNLCYKFHGYGSGKKKQEKRLKTVEEE 293
+PL + GMAATLALLR G L + + ++GRA D R+ H E + +D G KL+YRDE+GR +T+KEAFR + Y+FHG+ GKKKQEKRLK ++EE
Sbjct: 166 EPLVQTGMAATLALLRNRGDLRDAIQIRQAGRANDHRERHVEEELQIKD---GVKLDYRDEFGRLLTKKEAFRRISYRFHGHTPGKKKQEKRLKQIKEE 261
BLAST of mRNA_E-fasciculatus_F_contig13393.2541.1 vs. uniprot
Match: A0A7S2XZB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZB3_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.160e-19 Identity = 55/103 (53.40%), Postives = 73/103 (70.87%), Query Frame = 3
Query: 9 LAKNGMAATLALLRPSGVLN--EKFHRSGRAKDARKHHGEA---DETREDRESGAK---LEYRDEWGREITRKEAFRNLCYKFHGYGSGKKKQEKRLKTVEEE 293
L + GMAATL++L+ +G L E RSGRA+DAR E D+ ++D +G K +EYRDE+GRE+TRKEAFR L Y+FHG+G GKKK++KRLK + EE
Sbjct: 1 LVRQGMAATLSILKNTGDLKMREVEKRSGRARDARNFPWEKVLDDQEKKDIAAGKKEIKIEYRDEFGRELTRKEAFRQLSYRFHGHGPGKKKEDKRLKILAEE 103
BLAST of mRNA_E-fasciculatus_F_contig13393.2541.1 vs. uniprot
Match: K3X7K3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7K3_GLOUD) HSP 1 Score: 87.4 bits (215), Expect = 3.940e-19 Identity = 55/99 (55.56%), Postives = 71/99 (71.72%), Query Frame = 3
Query: 3 QPLAKNGMAATLALLRPSGVLNEKF--HRSGRAKDARKHHGEADETREDRESGAKLEYRDEWGREITRKEAFRNLCYKFHGYGSGKKKQEKRLKTVEEE 293
QPL +GMAATLALLR +G L E ++GRA DAR + + + +D G KL+YRDE+GR +T+KEAFR L YKFHG+ GKKK+EKRLK ++EE
Sbjct: 67 QPLVGSGMAATLALLRKTGDLRETRVERQAGRANDARDRNVDEELRIKD---GVKLDYRDEFGRLLTKKEAFRMLSYKFHGHEPGKKKKEKRLKQLKEE 162
BLAST of mRNA_E-fasciculatus_F_contig13393.2541.1 vs. uniprot
Match: A0A1V9YTX2_9STRA (U4/U6.U5 tri-snRNP-associated protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YTX2_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 4.090e-19 Identity = 54/99 (54.55%), Postives = 69/99 (69.70%), Query Frame = 3
Query: 3 QPLAKNGMAATLALLRPSGVLNEKFHRS--GRAKDARKHHGEADETREDRESGAKLEYRDEWGREITRKEAFRNLCYKFHGYGSGKKKQEKRLKTVEEE 293
+PL ++GMAATLALLR G L E+ S GRA D R + + +D G KL+YRDE+GR +T+KEAFR L Y+FHG+ GKKKQEKRLK ++EE
Sbjct: 14 EPLVQSGMAATLALLRNRGDLREELQLSQAGRANDQRDRNINDELQIKD---GVKLDYRDEFGRLLTKKEAFRQLSYRFHGHQPGKKKQEKRLKQLKEE 109
BLAST of mRNA_E-fasciculatus_F_contig13393.2541.1 vs. uniprot
Match: A0A485L1Q9_9STRA (Aste57867_14843 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1Q9_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.030e-18 Identity = 54/99 (54.55%), Postives = 72/99 (72.73%), Query Frame = 3
Query: 3 QPLAKNGMAATLALLRPSGVLNEKFH--RSGRAKDARKHHGEADETREDRESGAKLEYRDEWGREITRKEAFRNLCYKFHGYGSGKKKQEKRLKTVEEE 293
+PL ++GMAATLALLR G LN+K +SGRA D R+ E + +D G KL+YRDE+GR +T+KEAFR + Y+FHG+ GKK+QEKRLK ++EE
Sbjct: 559 EPLVQSGMAATLALLRNRGDLNDKIQVRQSGRANDHRERDIEDELQVKD---GVKLDYRDEFGRLLTKKEAFRRISYRFHGHTPGKKRQEKRLKQIKEE 654
BLAST of mRNA_E-fasciculatus_F_contig13393.2541.1 vs. uniprot
Match: A0A024TXF0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXF0_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.640e-18 Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 3
Query: 3 QPLAKNGMAATLALLRPSGVLNE--KFHRSGRAKDARKHHGEADETREDRESGAKLEYRDEWGREITRKEAFRNLCYKFHGYGSGKKKQEKRLKTVEEE 293
+PL + GMAATLALLR G L E + ++GRA D R H E + +D G KL+YRDE+GR +T+KEAFR + Y+FHG+ GKKKQEKRLK ++EE
Sbjct: 634 EPLVQTGMAATLALLRNRGDLKETVQVRQAGRANDHRDKHIEDELQVKD---GVKLDYRDEFGRLLTKKEAFRRISYRFHGHTPGKKKQEKRLKQIKEE 729
BLAST of mRNA_E-fasciculatus_F_contig13393.2541.1 vs. uniprot
Match: A0A7S3XYP2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYP2_HETAK) HSP 1 Score: 85.1 bits (209), Expect = 3.350e-18 Identity = 58/108 (53.70%), Postives = 73/108 (67.59%), Query Frame = 3
Query: 3 QPLAKNGMAATLALLRPSGVLNEK---FHRSGRAKDARKHHGE-ADETRED---RESGA---KLEYRDEWGREITRKEAFRNLCYKFHGYGSGKKKQEKRLKTVEEEK 296
QPLA G+AA LAL R +G L+ +GRA D R H E A + + D +E G K+EYRDE+GRE+TRKEAFR L YKFHG+G G++K++KRLK VEEEK
Sbjct: 27 QPLASGGLAAALALARTTGDLSAAPVVQRLAGRAHDERDFHYEKAIDQKNDQLMKELGTREVKIEYRDEFGRELTRKEAFRQLSYKFHGHGPGQRKRDKRLKKVEEEK 134
BLAST of mRNA_E-fasciculatus_F_contig13393.2541.1 vs. uniprot
Match: W4G1G8_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1G8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 9.140e-18 Identity = 52/99 (52.53%), Postives = 71/99 (71.72%), Query Frame = 3
Query: 3 QPLAKNGMAATLALLRPSGVLNE--KFHRSGRAKDARKHHGEADETREDRESGAKLEYRDEWGREITRKEAFRNLCYKFHGYGSGKKKQEKRLKTVEEE 293
+PL + GMAATLALLR G L + + ++GRA D R+ + E + +D G KL+YRDE+GR +T+KEAFR + Y+FHG+ GKKKQEKRLK ++EE
Sbjct: 623 EPLVQTGMAATLALLRNRGDLRDAIQIRQAGRANDHRERNVEEELQIKD---GVKLDYRDEFGRLLTKKEAFRRISYRFHGHTPGKKKQEKRLKQIKEE 718 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13393.2541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13393.2541.1 >prot_E-fasciculatus_F_contig13393.2541.1 ID=prot_E-fasciculatus_F_contig13393.2541.1|Name=mRNA_E-fasciculatus_F_contig13393.2541.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=114bp SSPWRRTAWRRPSPFSGHRVSSMKSSTVPGERRTRESTTGRRTRHARIESback to top mRNA from alignment at E-fasciculatus_F_contig13393:1767..2927+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13393.2541.1 ID=mRNA_E-fasciculatus_F_contig13393.2541.1|Name=mRNA_E-fasciculatus_F_contig13393.2541.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1161bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13393:1767..2927+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13393:1767..2927+ >mRNA_E-fasciculatus_F_contig13393.2541.1 ID=mRNA_E-fasciculatus_F_contig13393.2541.1|Name=mRNA_E-fasciculatus_F_contig13393.2541.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=684bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13393:1767..2927+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |