prot_E-fasciculatus_F_contig13386.2538.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13386.2538.1
Unique Nameprot_E-fasciculatus_F_contig13386.2538.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length224
Homology
BLAST of mRNA_E-fasciculatus_F_contig13386.2538.1 vs. uniprot
Match: D7FVV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV0_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 7.830e-49
Identity = 137/201 (68.16%), Postives = 143/201 (71.14%), Query Frame = 0
Query:   23 EGGEKSAARSKGERRNSRSRRTSAAESSDLSEDDGSMAVDRQYGNEGGNSSKMSTSVGKGRTSDRGKDKKKKQYGKRKQSESVDNGDNGGEKGARRRSERAKGI-KTSSXXXXRRKLSRSSERRSQRDGDTWRETKQGAAKAHEAKPQRQASRGVKTRGVSGAPSADDDSDHSAETTAAPPTAAVSPLRKLIRGFRGLKKK 222
            EGGEKSAARSKGER           ESSDLSED+GSM VD Q GN+GG+S  MST V K   SDRGKDKKK Q GK  Q  S D+G   GEK   RRSERAK   KTSS    RR LSRS ER SQRDGD  RETKQG AKA   K QR ASRGVKTRG SGAPSADDDSD SAET AAPPTAAVSP+R+L  GF GLKKK
Sbjct:  913 EGGEKSAARSKGERXXXXXXXXXXXESSDLSEDEGSMTVDGQSGNKGGSSPTMSTPVAKVHASDRGKDKKK-QDGKGTQLASADDG---GEK-VIRRSERAKADNKTSSS---RRTLSRSHERSSQRDGDRRRETKQGTAKAQGTKSQRHASRGVKTRGSSGAPSADDDSDRSAETKAAPPTAAVSPIRRLFGGFGGLKKK 1105          
BLAST of mRNA_E-fasciculatus_F_contig13386.2538.1 vs. uniprot
Match: A0A6H5KX11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX11_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.160e-21
Identity = 101/160 (63.12%), Postives = 108/160 (67.50%), Query Frame = 0
Query:    1 SRRRSRGRDTSGSDKKRASTESEGGEKSAARSKGERRNSRSRRTSAAESSDLSEDDGSMAVDRQYGNEGGNSSKMSTSVGKGRTSDRGKDKKKKQYGKRKQSESVDNGDNGGEKGARRRSERAKGI-KTSSXXXXRRKLSRSSERRSQRDGDTWRETKQG 159
            SRRRSRGR TS S            EKSA RSKGERRNSRSRR SAAESS+LSED+ SM VD Q GN+GG S  MSTSV K R SDRGKDKKK Q GK KQ   +   D+GGEK   + SERAK   KTSS    RR +SRS ER SQRDG T RET QG
Sbjct:  963 SRRRSRGRGTSESYSLNXXXXXXS-EKSAVRSKGERRNSRSRRASAAESSNLSEDERSMTVDGQSGNKGGRSPTMSTSVVKVRVSDRGKDKKK-QDGKGKQ---LAPADDGGEK-VIQLSERAKADNKTSSS---RRTVSRSHERSSQRDGYTRRETNQG 1113          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13386.2538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVV0_ECTSI7.830e-4968.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KX11_9PHAE1.160e-2163.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13386contigE-fasciculatus_F_contig13386:2746..3660 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13386.2538.1mRNA_E-fasciculatus_F_contig13386.2538.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13386 2746..3660 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13386.2538.1 ID=prot_E-fasciculatus_F_contig13386.2538.1|Name=mRNA_E-fasciculatus_F_contig13386.2538.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=224bp
SRRRSRGRDTSGSDKKRASTESEGGEKSAARSKGERRNSRSRRTSAAESS
DLSEDDGSMAVDRQYGNEGGNSSKMSTSVGKGRTSDRGKDKKKKQYGKRK
QSESVDNGDNGGEKGARRRSERAKGIKTSSSSSSRRKLSRSSERRSQRDG
DTWRETKQGAAKAHEAKPQRQASRGVKTRGVSGAPSADDDSDHSAETTAA
PPTAAVSPLRKLIRGFRGLKKKG*
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