prot_E-fasciculatus_F_contig13359.2519.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13359.2519.1
Unique Nameprot_E-fasciculatus_F_contig13359.2519.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length90
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13359.2519.1 vs. uniprot
Match: D7FQP7_ECTSI (S-layer domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP7_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.050e-18
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:   30 LACGTCGGPQCASKKRRGLHCCIDDIIQTCDPCSRPGAQAPCIID 74
            LACGTCGGP+CAS KR GL CCIDDII+TCDPC+RPG + PC+ID
Sbjct:    2 LACGTCGGPECASNKRDGLDCCIDDIIRTCDPCARPGTRPPCVID 46
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BLAST of mRNA_E-fasciculatus_F_contig13359.2519.1 vs. uniprot
Match: D7FJ60_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ60_ECTSI)

HSP 1 Score: 49.7 bits (117), Expect = 6.810e-5
Identity = 28/59 (47.46%), Postives = 31/59 (52.54%), Query Frame = 0 
Query:   20 QNGNGTVCCPLACGTCGGPQCASKK-RRGLH---CCIDDIIQTCDPCSRPGAQAPCIID 74
            ++ NG VCCP ACG CGG  C       GL    CC  DII +   CS     APCIID
Sbjct:   60 ESANGDVCCPTACGFCGGEACTEAAVNAGLDDGDCCFGDIIVSGASCSE-NQMAPCIID 117
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13359.2519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQP7_ECTSI1.050e-1877.78S-layer domain-containing protein n=1 Tax=Ectocarp... [more]
D7FJ60_ECTSI6.810e-547.46WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13359contigE-fasciculatus_F_contig13359:1630..3670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13359.2519.1mRNA_E-fasciculatus_F_contig13359.2519.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13359 1630..3670 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13359.2519.1 ID=prot_E-fasciculatus_F_contig13359.2519.1|Name=mRNA_E-fasciculatus_F_contig13359.2519.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=90bp
TPAQPTCAPYHPGMQGNVGQNGNGTVCCPLACGTCGGPQCASKKRRGLHC
CIDDIIQTCDPCSRPGAQAPCIIDAETGPTPAPTTAPTTA
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