prot_E-fasciculatus_F_contig13346.2510.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13346.2510.1
Unique Nameprot_E-fasciculatus_F_contig13346.2510.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length92
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13346.2510.1 vs. uniprot
Match: D7G1T9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T9_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 1.370e-19
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = 0 
Query:    1 GDGGGNAAVPPPALLVLAAVPLFCFLKRWRIQRLVADQEGTASISGSDDEAQS 53
            GDG GN AVPPPALLVLAAVPLFCFLKRWRIQRLVADQEGT SISGSDDE Q+
Sbjct:  127 GDG-GNGAVPPPALLVLAAVPLFCFLKRWRIQRLVADQEGT-SISGSDDEGQT 177
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BLAST of mRNA_E-fasciculatus_F_contig13346.2510.1 vs. uniprot
Match: A0A6H5KNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU8_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 1.580e-15
Identity = 44/53 (83.02%), Postives = 47/53 (88.68%), Query Frame = 0 
Query:    1 GDGGGNAAVPPPALLVLAAVPLFCFLKRWRIQRLVADQEGTASISGSDDEAQS 53
            GDG GN AVPPPALLVLAAVPLFCF+KR RIQRLVADQEGT SISGS+ E Q+
Sbjct:  280 GDG-GNGAVPPPALLVLAAVPLFCFIKRRRIQRLVADQEGT-SISGSNYEGQT 330
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13346.2510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1T9_ECTSI1.370e-1990.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNU8_9PHAE1.580e-1583.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..92
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13346contigE-fasciculatus_F_contig13346:1046..2439 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13346.2510.1mRNA_E-fasciculatus_F_contig13346.2510.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13346 1045..2439 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13346.2510.1 ID=prot_E-fasciculatus_F_contig13346.2510.1|Name=mRNA_E-fasciculatus_F_contig13346.2510.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=92bp
GDGGGNAAVPPPALLVLAAVPLFCFLKRWRIQRLVADQEGTASISGSDDE
AQSDKEEEEVVEDAWWGKGAVDDEKKKTKMGDGVGDSNAEER
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