mRNA_E-fasciculatus_F_contig13284.2471.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13284.2471.1
Unique NamemRNA_E-fasciculatus_F_contig13284.2471.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13284.2471.1 vs. uniprot
Match: D7G759_ECTSI (Weakly similar Glutamic acid-rich protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G759_ECTSI)

HSP 1 Score: 551 bits (1419), Expect = 1.080e-188
Identity = 323/397 (81.36%), Postives = 335/397 (84.38%), Query Frame = 1
Query:    1 RVLLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLGKMSREWDKKTACRYFDLDVLCRVSEEGEAFRSFVDRYGTYVFKRAEGFNARFQELDTMQDEEGWEHVVTTLAKAQKAIDLGVACQPQPEEETELTVLCLRNTALDLHQLWRRFHSALDWVLEEAEDGDLFDGADSAMVAECLNEFKGFYMSRYDEVLTFLLDAEELLGIYGLHVPDLSLPAAHGFDTPSTQASTDSNSSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPRKATTAPATNTKTAASRAKAYRASXXXXXXXXXXXXXXXXXXXXXXXXXXSKGGDATMRNAAVKGGGARRGVDRKQPAVPPGVEGTCDTG--GGVGE 1185
            RVLLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFL KMSREWDKKTACRYFDLDVLCRVSEEGEAFRSFVDRYGTYVFKRAEGFNARFQELDTMQ EEGWE+VVTTLAKAQKAIDLGV+CQPQPEEETELTVLCLRNTALDLHQLWRRFHS+LDWVLEEAEDGDLFDGADSAMV ECLN+FKGFYM+RYD+VLTFLLDAEELLGIYGLHVPDLSLPAAHGFDTPSTQ STDSNS+               XXXXXXXXXXXX       XXXXXXXXXXXXXXXXX  RPRKATTAPAT++KTAASRAKAYRAS                 X        SKGG+ T++NAAVKGGGARRGVDRKQ AVPPGVE T   G  GGV E
Sbjct:  306 RVLLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLAKMSREWDKKTACRYFDLDVLCRVSEEGEAFRSFVDRYGTYVFKRAEGFNARFQELDTMQREEGWENVVTTLAKAQKAIDLGVSCQPQPEEETELTVLCLRNTALDLHQLWRRFHSSLDWVLEEAEDGDLFDGADSAMVEECLNDFKGFYMTRYDDVLTFLLDAEELLGIYGLHVPDLSLPAAHGFDTPSTQTSTDSNSAV-----------EEAXXXXXXXXXXXXNEDGGSEXXXXXXXXXXXXXXXXXAARPRKATTAPATSSKTAASRAKAYRASKTASSRGSPSVSYGGGGXSSNPSDVASKGGNDTVKNAAVKGGGARRGVDRKQSAVPPGVERTESVGEKGGVDE 691          
BLAST of mRNA_E-fasciculatus_F_contig13284.2471.1 vs. uniprot
Match: A0A835ZEZ8_9STRA (ENTH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEZ8_9STRA)

HSP 1 Score: 195 bits (496), Expect = 9.750e-52
Identity = 111/261 (42.53%), Postives = 153/261 (58.62%), Query Frame = 1
Query:    1 RVLLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLGKMSREWDKKTAC---------RYFDLDVLCRVSEEGEA------FRSFVDRYGTYVFKRAEGFNARFQELDTMQDEEGWEHVVTTLAKAQKAIDLGVACQPQPEEETELTVLCLRNTALDLHQLWRRFHSALDWVLEEAEDGDLFDGADSAMVAECLNEFKGFYMSRYDEVLTFLLDAEELLGIYGLHVPDLSLPAAHGFDTPSTQASTDSNSSA 738
            RV LRKLWAKM EPDWRT  K+ Y+ H +LR+LP    A+LK  +GK+ RE  K+ A          RYFDL     V+E G A      F  FV  Y TYV +R++ F  +F+EL  +     +EHV++ L KA+KA++  +ACQ   ++E+E+T+L L+   +D  +L+R FH+AL W L EAE GDLF  AD   V E L +F+ FY S +DE+  FL + E LL ++GL   +LSLP     D     A+    S+A
Sbjct:  255 RVFLRKLWAKMREPDWRTKVKSCYILHRVLRELPPRDDAVLKKHMGKLRRERSKRPAGAVGGGGDRPRYFDLAAA--VAEVGPAPADARTFGGFVRSYVTYVLRRSQQFGGKFEELQGVGPGSSYEHVISVLVKARKALEAAMACQISADQESEVTLLALQLVCMDAAKLFRLFHAALGWALTEAESGDLFAEADPQAVKEVLADFRAFYDSCHDELSAFLDETEALLDVWGLSCGNLSLPEPLPADVALLSAARSPASAA 513          
BLAST of mRNA_E-fasciculatus_F_contig13284.2471.1 vs. uniprot
Match: A0A4D9DHA3_9STRA (ENTH domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHA3_9STRA)

HSP 1 Score: 157 bits (396), Expect = 9.120e-39
Identity = 95/246 (38.62%), Postives = 137/246 (55.69%), Query Frame = 1
Query:    1 RVLLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLGKMSREWDKKTACRYFD------LDVLCRVSEEGEAF----RSFVDRYGTYVFKRAEGFNARFQELDTM-QDEEGWEHVVTTLAKAQKAIDLGVAC---QPQPEEETELTVLCLRNTALDLHQLWRRFHSALDWVLEEAEDGDLFDGADSAMVAECLNEFKGFYMSRYDEVLTFLLDAEELLGIYGLHVPDLSLPAAHGFD 696
            RV LRKLWAKM+E DWRTV+KA+YLFH +LR+   +   I K    KMSRE  KKT  RYFD      +DV+      G       R F+ RY  YV +RA+ F ++F+E+  + Q E   + +V  L KA+K +  G+ C   + + + ++E+T++C    A D++ L R FH  L W ++       F+GAD A VA+ L  F+  Y   Y +V  FL    +LLG+YG+ +    L  AH F+
Sbjct:  297 RVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKTRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIEAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLSRLFHEKLRWAIDN--QAAAFEGADRAEVAKILERFQASYARLYPQVQQFLTQTAQLLGVYGIKLRT-KLEPAHRFE 539          
BLAST of mRNA_E-fasciculatus_F_contig13284.2471.1 vs. uniprot
Match: A0A7S1TWX4_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWX4_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.230e-25
Identity = 71/223 (31.84%), Postives = 113/223 (50.67%), Query Frame = 1
Query:    1 RVLLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLGKMSREWDKKTAC--RYFDLDVLCRVSEEGEAFRSFVDRYGTYVFKRAEGFNARFQELDTMQDEEGWEHVVTTLAKAQKAIDLGVACQPQPEEETELTVLCLRNTALDLHQLWRRFHSALDWVLEEAEDGDLFDGADSAMVAECLNEFKGFYMSRYDEVLTFLLDAEELLGIYGLHVP 663
            RV LRKLW+KM E DWRTV KA++L H I+RD      AI    L +M RE + K      YF+L  +  ++ E E+FR+FV  Y  +V KRA  F  RF ++  +  ++    V+ T+  A+  ++ G+ C  +P+ E  +T   L   + DL  LW+ +   ++ ++E+    +L      +M  E +   + F   R + +  F+      L  Y L VP
Sbjct:  233 RVTLRKLWSKMMEKDWRTVIKALFLLHRIVRDSHPRDGAIFDRHLRRMQREINPKAKPPRTYFNLAQIIDLAPESESFRNFVGAYAVFVLKRATTFAGRFDQVKALGPDDKESDVLATMRAARATLNYGLRCNLEPDLENYVTCTALEVLSRDLRDLWKGYCKGINCLMEDRRPSNL----SPSMKKEKMKLLESFKEDR-NNLKQFMRKTSRALAYYRLRVP 450          
BLAST of mRNA_E-fasciculatus_F_contig13284.2471.1 vs. uniprot
Match: A0A7S2SSM7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSM7_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.030e-24
Identity = 77/228 (33.77%), Postives = 111/228 (48.68%), Query Frame = 1
Query:    1 RVLLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLGKMSREWDKKTACRYFDLD-------VLCRVSEEGEAFR--SFVDRYGTYVFKRAEGFNARFQELDTMQDEE--GWEHVVTTLAKAQKAIDLGVACQPQPEEETELTVLCLRNTALDLHQLWRRFHSALDWVLEEAEDGDLFDGADSAMVAECLNEFKGFYMSRYDEVLTFLLDAEELLGIYG 651
            RV LRKLWAK+ EPDWR   KA+ + H +L     E   + K  + KM +E  K++  R+FD+         L  + +E  A +   F+  Y  YV +R+  F   F+EL   +  E    E +V  L KA+K + LG+AC+  P+ E+ELT  CL     DL QL+  F ++L  VL+           D A V   L  F  F +   + +   L D   LL +YG
Sbjct:   97 RVTLRKLWAKLCEPDWRVSLKALCILHVLLSRGTAEDTIVFKAMMEKMRKERSKRSKSRFFDVSRVLGDRPPLGLLGDESSARQCIQFLRHYANYVLQRSRMFTGNFEELQLAKRGELQSTEDLVMQLYKAKKLLSLGLACRVSPDIESELTFACLEMVVFDLVQLFDLFDTSLSLVLDRKSRMFTRWNKDEARVL--LRTFSKFRLEVGESIQKELEDVGSLLALYG 322          
BLAST of mRNA_E-fasciculatus_F_contig13284.2471.1 vs. uniprot
Match: A0A7S0SQZ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQZ5_9STRA)

HSP 1 Score: 108 bits (271), Expect = 6.230e-23
Identity = 67/212 (31.60%), Postives = 116/212 (54.72%), Query Frame = 1
Query:   10 LRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLGKMSREWD-KKTACRYFDLDVLCRVSEEGEAFRSFVDRYGTYVFKRAEGFNARFQELDTMQDEEGWEHVVTTLAKAQKAIDLGVACQ-PQPEEETELTVLCLRNTALDLHQLWRRFHSALDWVLEEAEDGDLFDGADSAMVAECLNEFKGFYMSRYDEVLTFLLDAEELL 639
            L K+W KM E DWRTVSK+ YL H I+RD  VE        + +MSR  + KK   +YFDL ++ ++   G +++ FV  Y  YV  R++ F+A+F + D +  +     VV  L KAQ++++LG+     + ++   +T   L+  A+DL  L+++F S L  +++ ++       A++  V + LN  K + +    ++  FLL  ++ L
Sbjct:  139 LHKIWTKMCEKDWRTVSKSFYLLHCIVRDSSVESCEEFTDAIKEMSRTRNPKKPDHKYFDLKLIKQLDSFGNSYKDFVVAYAQYVLYRSKNFHAKFNQFDELNSKSKETEVVALLKKAQQSLNLGLKVSLTKKDQYNAITGQILKLLAIDLRDLYQQFTSTLLGIVDSSKGSYASPKANNDDVIDLLNFHKDYTV----KIKEFLLKIQKNL 346          
BLAST of mRNA_E-fasciculatus_F_contig13284.2471.1 vs. uniprot
Match: A0A448ZTH1_9STRA (ENTH domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTH1_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.220e-17
Identity = 75/234 (32.05%), Postives = 108/234 (46.15%), Query Frame = 1
Query:    7 LLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLGKMSREWDKKTACRYFDLDVLCR--VSEEGEAFRSFVDRYGTYVFKRAEGFNARFQEL------DTMQDEEGWEHVVTTLAKAQKA------IDLGVACQPQPEEETELTVLCLRNTALDLHQLWRRFHSALDWVLEEAEDGDLFDGADSAMVAECLNEFKGFYM-SRYDEVLTFLLDAEELLGIYGLHVP 663
            +LRKLWAKM+E DWRT  KA+Y+ H    D   EH   LK  + ++ R  D K   ++F   +L     SEE   +R+F+ RY  YV  RA+ F   F E+      DT + +   + + +T  KA         ++ G+AC  +  EE E T L +   A DL  L      AL   L+   D DL  GAD  ++ +       FY  S   +  + +      L  YGL +P
Sbjct:  271 VLRKLWAKMAEKDWRTTIKALYILHRFSADGSPEHAPALKARVRELRRTRDPKRKGKFFSSKLLLAGDTSEETAKYRAFLGRYAHYVLLRAQCFGGMFDEIAAPSAKDTKKKKAAPKPITSTSLKADHLDAAKLLLETGLACVLKKGEENENTALAVERVASDLLGLTTAVTGALTRALK---DDDL-KGADPVLIKKWCE----FYSESLLPQTRSMVKKTAPTLDAYGLFLP 496          
BLAST of mRNA_E-fasciculatus_F_contig13284.2471.1 vs. uniprot
Match: A0A7S1UKU7_9STRA (Hypothetical protein n=3 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UKU7_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.230e-17
Identity = 73/234 (31.20%), Postives = 106/234 (45.30%), Query Frame = 1
Query:    7 LLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLGKMSREWD-KKTACRYFDLDVLCRVSE--EGEAFRSFVDRYGTYVFKRAEGFNARFQELDTM------QDEEGWEHVVTT------LAKAQKAIDLGVACQPQPEEETELTVLCLRNTALDLHQLWRRFHSALDWVLEEAEDGDLFDGADSAMVAECLNEFKGFYMSRYDEVLTFLLDAEELLGIYGLHVP 663
            +LRKLWAK +E DWRT  KA+Y+ H    D   EH   L   L ++ R  D K+   +YF+   L  V    E EAFR FV RY  YV  R + F   F E+               + + +T      L  A+  +  G+ACQ + +E TE T + +   A DL  L     SA+   L  A  G+  DG+D  ++ +    +    + R    LT +      L  YG+++P
Sbjct:  271 VLRKLWAKTAEKDWRTKVKALYILHRYSSDGAPEHKDALIKRLRELRRTSDPKRKGKKYFNKQQLLAVENTPENEAFRGFVGRYAHYVLARTQSFGGMFVEIGEAPRPPPKSSNRPPKPLTSTSLKQEHLVNAKMVLTAGLACQLKDDEVTENTAIAVERVASDLIAL----SSAVAMALNRALKGNSSDGSDPVLLKKWCEFYSEELLPR---TLTMVKKTSPKLDPYGMYLP 497          
BLAST of mRNA_E-fasciculatus_F_contig13284.2471.1 vs. uniprot
Match: A0A6S8JKL4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8JKL4_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 6.500e-17
Identity = 71/231 (30.74%), Postives = 106/231 (45.89%), Query Frame = 1
Query:    7 LLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLGKMSREWDKKTACRYFDLDVLCR--VSEEGEAFRSFVDRYGTYVFKRAEGFNARFQELDTMQ--DEEGWEHVVTTLA-------KAQKAIDLGVACQPQPEEETELTVLCLRNTALDLHQLWRRFHSALDWVLEEAEDGDLFDGADSAMVAECLNEFKGFYMSRY-DEVLTFLLDAEELLGIYGLHVP 663
            +LRKLW KM E DWRT  KA+Y+ H    D   EH A LK  L ++ R  D K   ++F+   L       E   FR+F+ RY  YV  RA+ F+  F+E+ +    D++     +T+ A        A   +  G+ACQ +  EE E T + +   A DL  L      AL+  L++ +      G D A+V +       FY  +   +  + +      L  YGL +P
Sbjct:  150 VLRKLWGKMCEKDWRTTMKALYVLHRFSADGAPEHAASLKARLRELRRTKDPKRKDKFFNSKQLLAGDAKPENIKFRAFMSRYAHYVLLRAQCFSGMFEEISSEPKVDKKKPPKPITSTALRTEHLEAASMLLKAGLACQLKDGEECENTAIAVERVASDLIGLTSAVAMALNRALKDVD----LKGGDPALVKKWCE----FYSEQLLPQTKSMVKKTSSRLDAYGLFLP 372          
BLAST of mRNA_E-fasciculatus_F_contig13284.2471.1 vs. uniprot
Match: A0A7S2EXR9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXR9_TRICV)

HSP 1 Score: 92.0 bits (227), Expect = 1.060e-16
Identity = 75/238 (31.51%), Postives = 106/238 (44.54%), Query Frame = 1
Query:    7 LLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLGKMSREWDKKTACRYFDLDVLCR--VSEEGEAFRSFVDRYGTYVFKRAEGFNARFQEL------DTMQDEEGWEHVVTTLA-------KAQKAIDLGVACQPQPEEETELTVLCLRNTALDLHQLWRRFHSALDWVLEEAEDGDLFDGADSAMVAECLNEFKGFYMSRYDEVL----TFLLDAEELLGIYGLHVP 663
            +LRK+WAKM+E DWRT  KA+Y+ H    D   +H A LK  L ++ R  D K   +YF+   L     S +   +R+F+ RY  YV  RA+ F   F E+       +          +T+ A        AQ  +  G AC  +  EE E T  C+   A DL  L     S L+  L+    G   +GAD A++         FY    DE+L      +  A   L  YGL++P
Sbjct:  147 VLRKVWAKMTEKDWRTKVKALYVLHRFSSDGAPDHQAALKARLRELRRTRDPKRKEKYFNSKQLLAGDASPDNVKYRAFMARYAHYVLLRAQCFGGMFNEIGQEPPTSSKSSSRSSAKPITSAALRPEHLDAAQMILKAGTACALKDGEECENTCFCVERVASDLIGLTGAVASGLNRALK----GKGAEGADPAVIKRWCE----FYS---DELLPKTKAMVKKASPQLDAYGLYLP 373          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13284.2471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G759_ECTSI1.080e-18881.36Weakly similar Glutamic acid-rich protein n=2 Tax=... [more]
A0A835ZEZ8_9STRA9.750e-5242.53ENTH domain-containing protein n=1 Tax=Tribonema m... [more]
A0A4D9DHA3_9STRA9.120e-3938.62ENTH domain-containing protein n=3 Tax=Monodopsida... [more]
A0A7S1TWX4_9STRA3.230e-2531.84Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SSM7_9STRA1.030e-2433.77Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0SQZ5_9STRA6.230e-2331.60Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A448ZTH1_9STRA1.220e-1732.05ENTH domain-containing protein n=1 Tax=Pseudo-nitz... [more]
A0A7S1UKU7_9STRA2.230e-1731.20Hypothetical protein n=3 Tax=Grammatophora oceanic... [more]
A0A6S8JKL4_9STRA6.500e-1730.74Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2EXR9_TRICV1.060e-1631.51Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13284contigE-fasciculatus_F_contig13284:1..3534 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score103.6
Seed ortholog evalue2.1e-19
Seed eggNOG ortholog2880.D8LGM3
EggNOG OGs2ECB5@1,2SI7J@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionweakly similar Glutamic acid-rich protein precursor
Ec32 orthologEc-01_010940.1
Exons6
Model size1185
Cds size1155
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927830.8100533-CDS-E-fasciculatus_F_contig13284:0..4871622927830.8100533-CDS-E-fasciculatus_F_contig13284:0..487Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13284 1..487 -
1695995713.2781453-CDS-E-fasciculatus_F_contig13284:0..4871695995713.2781453-CDS-E-fasciculatus_F_contig13284:0..487Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13284 1..487 -
1622927830.8208315-CDS-E-fasciculatus_F_contig13284:1127..12321622927830.8208315-CDS-E-fasciculatus_F_contig13284:1127..1232Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13284 1128..1232 -
1695995713.2894714-CDS-E-fasciculatus_F_contig13284:1127..12321695995713.2894714-CDS-E-fasciculatus_F_contig13284:1127..1232Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13284 1128..1232 -
1622927830.8365812-CDS-E-fasciculatus_F_contig13284:1573..17041622927830.8365812-CDS-E-fasciculatus_F_contig13284:1573..1704Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13284 1574..1704 -
1695995713.2989798-CDS-E-fasciculatus_F_contig13284:1573..17041695995713.2989798-CDS-E-fasciculatus_F_contig13284:1573..1704Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13284 1574..1704 -
1622927830.853945-CDS-E-fasciculatus_F_contig13284:2348..25131622927830.853945-CDS-E-fasciculatus_F_contig13284:2348..2513Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13284 2349..2513 -
1695995713.3086715-CDS-E-fasciculatus_F_contig13284:2348..25131695995713.3086715-CDS-E-fasciculatus_F_contig13284:2348..2513Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13284 2349..2513 -
1622927830.8710768-CDS-E-fasciculatus_F_contig13284:2847..30031622927830.8710768-CDS-E-fasciculatus_F_contig13284:2847..3003Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13284 2848..3003 -
1695995713.3182204-CDS-E-fasciculatus_F_contig13284:2847..30031695995713.3182204-CDS-E-fasciculatus_F_contig13284:2847..3003Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13284 2848..3003 -
1622927830.8858192-CDS-E-fasciculatus_F_contig13284:3393..35041622927830.8858192-CDS-E-fasciculatus_F_contig13284:3393..3504Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13284 3394..3504 -
1695995713.3280838-CDS-E-fasciculatus_F_contig13284:3393..35041695995713.3280838-CDS-E-fasciculatus_F_contig13284:3393..3504Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13284 3394..3504 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927830.8994899-UTR-E-fasciculatus_F_contig13284:3504..35341622927830.8994899-UTR-E-fasciculatus_F_contig13284:3504..3534Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13284 3505..3534 -
1695995713.3381495-UTR-E-fasciculatus_F_contig13284:3504..35341695995713.3381495-UTR-E-fasciculatus_F_contig13284:3504..3534Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13284 3505..3534 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13284.2471.1prot_E-fasciculatus_F_contig13284.2471.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13284 1..3504 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13284.2471.1

>prot_E-fasciculatus_F_contig13284.2471.1 ID=prot_E-fasciculatus_F_contig13284.2471.1|Name=mRNA_E-fasciculatus_F_contig13284.2471.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=385bp
MSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLGKMSREWDKKTACRY
FDLDVLCRVSEEGEAFRSFVDRYGTYVFKRAEGFNARFQELDTMQDEEGW
EHVVTTLAKAQKAIDLGVACQPQPEEETELTVLCLRNTALDLHQLWRRFH
SALDWVLEEAEDGDLFDGADSAMVAECLNEFKGFYMSRYDEVLTFLLDAE
ELLGIYGLHVPDLSLPAAHGFDTPSTQASTDSNSSAVEETEEEEEEEEDG
SSDSSDDGEGGSESSEDSTAVDTAVEAASTAAAAAAAARPRKATTAPATN
TKTAASRAKAYRASKTASSRGSPTSVSDGGSGSSNPSGVASKGGDATMRN
AAVKGGGARRGVDRKQPAVPPGVEGTCDTGGGVGE
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mRNA from alignment at E-fasciculatus_F_contig13284:1..3534-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13284.2471.1 ID=mRNA_E-fasciculatus_F_contig13284.2471.1|Name=mRNA_E-fasciculatus_F_contig13284.2471.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3534bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13284:1..3534- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGGTATTGCTGCGGAAGCTGTGGGCCAAGATGAGCGAGCCCGACTGGCG GACCGTGTCCAAAGCGGTGTATCTTTTCCACAGCATCCTGAGAGACCTGC CCGTGGAGCACCACGCGATCCTCAAGATTTTTCTCGGAAAGGTGATCTAT TTTGCAAAACCTTCATGCGGAGTAACCCAGTCGCGATTGTTACGACTTTT ACCGGAAAGGTATTAACACAAGCTTAAAAGGTGAGTGGTAACACAGGAAA GTGTTTGATGGGTATTTTCTACTTCTGCCATAGGGTAGATACGTGCAGAT GTTTCCGCTACTTGATGCTGAAGACGAGACCGCCAGTGGCGCCTGCTCTC GTCACTTGTCATTTGCTGCTTCTTTCCGCAAGCCTTCGCAGGACGTTGGC CACCTAAAACCTCGATCGGACCGCCTGTACTACAATAATATTCATCCCCA ACCACGCGCTCTATTATCCGCTTACCGGCCCGACGGTTCTCTCGCGGTTT TTATTTCTGGTTTGGGATGGTTTTCTTCCAGATGAGTCGGGAGTGGGACA AGAAGACCGCGTGCCGCTACTTCGACCTGGACGTGCTGTGCCGCGTTAGC GAGGAAGGAGAGGCGTTCCGCTCCTTCGTCGACCGTTACGGCACGTACGT CTTCAAGCGCGCGGAGGGCTTCAACGCTAGGTTCCAGGTGTGTCTTCTAT TTGGTACATAATCTGGTTGTTGCTGCTGCTAATGCTGTCTCAAAGTAGCG GTATCGTTGTTTTTTGCCATGCTTTGTATAACAAGTCGTCCCTGAACGGT ACGCACGTTATACTGTCAGCACTTCCGTTGGATAGTCCCAGCGTGTCCGA TGTTAAGAGCCCACGAGGAAGGCCCCTGATGGTGGTTGCTGCTATTGTGC TGATGCAGGGACACACCTGTGTGCGTGACTTGTGTTGGTATTGTGTTTCC GACGGCGGGAATCATGTCACAGGACCCCCCTTTTTTTGTTTTCCTCCCGC GCTGTCCGGCCGACCGTGCAGGAGCTTGACACCATGCAGGACGAGGAGGG ATGGGAGCACGTCGTCACCACCCTTGCGAAGGCACAGAAGGCGATTGACC TCGGGGTTGCCTGTCAGCCGCAGCCGGAAGAGGAGACGGAGTTGACGGTG CTGTGCCTGCGGAACACTGCCCTCGACTTGCACCAGGTGAGGTCCCAGTG TGTGTGCATGGCGCGGTCTGGCGTGTTGGGAAAGTGCAGCAGAAGTGGGT GTCGAGGGTAGCAGCGTGGAAAGTCTGCATATGAAACGTGCTTGGAAGAA ACGGTGTACAGTAGGCGCGAGTTTGGTAGTACGCACACTGTTCGAGAGTT GTCTAAAAATCGTTAGATATTTCACTGCTGTTGTAGACATCGCCGTCAAC ATGTGGAGCACCTGCTGGGAAATACACGATCAGAACTTTTTGCCTTTAAC GCATACAGCGTCACACCGGAAAGCATGAGCAATCCCCCAACTGTTCTCGC GCCATTCCCGCCGACTGGTCGTGAGTTCTGATCGCCATCGAACCCAACGC CACTCTTTGTGATGATGCTTCCCTTTCCCGACTGCCGGGGTAACAGCTAG CAGTCTCGAACCGTACTCCCCAAGCCATGCAGTTCCCGCTCGGATTCACC TTCTCCAGTCCTCTGCTCTGGCTTTCCTCGCTTGTCGTCTGTTTTTCGAG TTCGGGCGCCTGCGTGCGTGTGCGTGTGTGTGTGTTAATAATGTTAGCAT CGACCGCGCTAACCGGCTGACTCATAACGTGTGTGTGTTTGTTGGTGATT GGTGGAACAACGAAAACTACGCACCCACAGCTTTGGCGGCGGTTTCACTC CGCTCTGGACTGGGTGCTGGAAGAGGCCGAAGACGGCGACTTGTTCGACG GCGCAGACTCGGCTATGGTGGCGGAGTGCCTCAACGAGTTCAAGGGTTTC TACATGAGCAGGTGCGTCTTGTCTTTTCTTGGCAAGACGGTAGGGTAGTC AGGCAGTGCGAGCGACAACAATACATGAGAGTAAAGAAAAAGAAAAAAGA GATGAGAGCACGGAGAATGTACTTCTGTATTTTTTTTCATTTTACCGGTC GCTTGGCATTGCCTTTGTCGTCTGCCACACCGGGAGTGGGGGTATGAAGA CGTTACGTCAAGTGTTTTTTTTTCGAGGCGCTAAATAGGTACGTACGAAC GCTGAGGTAGTACAACTGCACGCCCCCACCTACCCGGACACTGTCCTAAA CGCACGCTACCCGAACCTTCTCGAAATTCCACCAAATGTTGAATCGAACC AGGTACGACGAGGTCTTGACATTCCTTCTCGACGCGGAAGAGCTGCTGGG CATCTACGGCCTTCATGTTCCGGACCTGAGTCTCCCTGCCGCACACGGCT TCGACACGTAAGTGCGGCCGGACAGGGTGCAGCTTTAAGTGTACCAGGTA CCATTCTCTGGTGTTTGTGTTTCCGTCTGGGGAACACCACCCAATGCCTT CTTTTTTTTCCACTCCTACCGTCGGGGTTTGGCCTGGATTCAGAAGAGCT TCTTGGCTGGCATTTTTTTTGGTTGGTCACTACTGGTGTGGGCCCCAACG CCGCCCGGTCCCCGTGTAATTTATCACCCATTGTAGATGACCACGTGCCG GAAGGAAGCAACAACACGGCGTTCGAAGCTGCCGCCCATAGTTACAAGAT GTAGTAGAGTCAGTGCAAATGCGCCGGCTGAAGTCCGCCTCTCGCACGGT TGTATAGGCATGCAGATCACCTGCCTTGCGACTCGCTGCAAGCCTTTCGG CGGTTCGCGCTTTTTTATTTTTTATTCTTCTGGACCGTGGACAAAATCCC GATAGATGTGCTCCCTTTGAAAAAAATAAGTCGGGTTCAAGCTTCGTAAT GTCTGAGTACTTGAGCCATGCCTGACAACAAGTGCACCCCACCCCCGCTC CGTCTTCTCGAGGACGCGTGGTCATGGTCTAACCGCGAAGACATGCTAAA CACGAGTACGCCTCCCCCCCCCCCTCGCGCTCCTTCGCATCTACTAGGCC CTCTACTCAGGCGTCAACAGACAGCAACAGCAGCGCGGTCGAAGAAACGG AGGAGGAGGAGGAGGAGGAGGAGGACGGCAGCAGCGATAGCAGCGACGAC GGAGAAGGAGGCAGCGAAAGCTCCGAAGATAGCACCGCCGTAGACACAGC AGTCGAGGCCGCTAGCACTGCTGCTGCTGCTGCTGCTGCTGCTAGACCGC GAAAGGCCACGACCGCTCCCGCCACCAATACCAAGACGGCAGCCTCGAGG GCGAAGGCCTACAGGGCGAGCAAAACTGCGTCCTCCCGAGGCTCGCCTAC TAGCGTATCCGACGGCGGCAGCGGCAGCAGTAACCCATCGGGCGTGGCAT CAAAGGGGGGGGACGCCACCATGAGAAACGCTGCCGTAAAAGGGGGTGGG GCGAGGAGGGGGGTGGATCGGAAGCAGCCTGCGGTGCCCCCAGGGGTGGA AGGCACGTGCGACACGGGGGGGGGCGTTGGGGAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13284:1..3534-

>mRNA_E-fasciculatus_F_contig13284.2471.1 ID=mRNA_E-fasciculatus_F_contig13284.2471.1|Name=mRNA_E-fasciculatus_F_contig13284.2471.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2310bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13284:1..3534- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGCGAGCCCGACTGGCGGACCGTGTCCAAAGCGGTGTATCTTTTCCA
CAGCATCCTGAGAGACCTGCCCGTGGAGCACCACGCGATCCTCAAGATTT
TTCTCGGAAAGATGAGCGAGCCCGACTGGCGGACCGTGTCCAAAGCGGTG
TATCTTTTCCACAGCATCCTGAGAGACCTGCCCGTGGAGCACCACGCGAT
CCTCAAGATTTTTCTCGGAAAGATGAGTCGGGAGTGGGACAAGAAGACCG
CGTGCCGCTACTTCGACCTGGACGTGCTGTGCCGCGTTAGCGAGGAAGGA
GAGGCGTTCCGCTCCTTCGTCGACCGTTACGGCACGTACGTCTTCAAGCG
CGCGGAGGGCTTCAACGCTAGGTTCCAGATGAGTCGGGAGTGGGACAAGA
AGACCGCGTGCCGCTACTTCGACCTGGACGTGCTGTGCCGCGTTAGCGAG
GAAGGAGAGGCGTTCCGCTCCTTCGTCGACCGTTACGGCACGTACGTCTT
CAAGCGCGCGGAGGGCTTCAACGCTAGGTTCCAGGAGCTTGACACCATGC
AGGACGAGGAGGGATGGGAGCACGTCGTCACCACCCTTGCGAAGGCACAG
AAGGCGATTGACCTCGGGGTTGCCTGTCAGCCGCAGCCGGAAGAGGAGAC
GGAGTTGACGGTGCTGTGCCTGCGGAACACTGCCCTCGACTTGCACCAGG
AGCTTGACACCATGCAGGACGAGGAGGGATGGGAGCACGTCGTCACCACC
CTTGCGAAGGCACAGAAGGCGATTGACCTCGGGGTTGCCTGTCAGCCGCA
GCCGGAAGAGGAGACGGAGTTGACGGTGCTGTGCCTGCGGAACACTGCCC
TCGACTTGCACCAGCTTTGGCGGCGGTTTCACTCCGCTCTGGACTGGGTG
CTGGAAGAGGCCGAAGACGGCGACTTGTTCGACGGCGCAGACTCGGCTAT
GGTGGCGGAGTGCCTCAACGAGTTCAAGGGTTTCTACATGAGCAGCTTTG
GCGGCGGTTTCACTCCGCTCTGGACTGGGTGCTGGAAGAGGCCGAAGACG
GCGACTTGTTCGACGGCGCAGACTCGGCTATGGTGGCGGAGTGCCTCAAC
GAGTTCAAGGGTTTCTACATGAGCAGGTACGACGAGGTCTTGACATTCCT
TCTCGACGCGGAAGAGCTGCTGGGCATCTACGGCCTTCATGTTCCGGACC
TGAGTCTCCCTGCCGCACACGGCTTCGACACGTACGACGAGGTCTTGACA
TTCCTTCTCGACGCGGAAGAGCTGCTGGGCATCTACGGCCTTCATGTTCC
GGACCTGAGTCTCCCTGCCGCACACGGCTTCGACACGCCCTCTACTCAGG
CGTCAACAGACAGCAACAGCAGCGCGGTCGAAGAAACGGAGGAGGAGGAG
GAGGAGGAGGAGGACGGCAGCAGCGATAGCAGCGACGACGGAGAAGGAGG
CAGCGAAAGCTCCGAAGATAGCACCGCCGTAGACACAGCAGTCGAGGCCG
CTAGCACTGCTGCTGCTGCTGCTGCTGCTGCTAGACCGCGAAAGGCCACG
ACCGCTCCCGCCACCAATACCAAGACGGCAGCCTCGAGGGCGAAGGCCTA
CAGGGCGAGCAAAACTGCGTCCTCCCGAGGCTCGCCTACTAGCGTATCCG
ACGGCGGCAGCGGCAGCAGTAACCCATCGGGCGTGGCATCAAAGGGGGGG
GACGCCACCATGAGAAACGCTGCCGTAAAAGGGGGTGGGGCGAGGAGGGG
GGTGGATCGGAAGCAGCCTGCGGTGCCCCCAGGGGTGGAAGGCACGTGCG
ACACGGGGGGGGGCGTTGGGGAGGCCCTCTACTCAGGCGTCAACAGACAG
CAACAGCAGCGCGGTCGAAGAAACGGAGGAGGAGGAGGAGGAGGAGGAGG
ACGGCAGCAGCGATAGCAGCGACGACGGAGAAGGAGGCAGCGAAAGCTCC
GAAGATAGCACCGCCGTAGACACAGCAGTCGAGGCCGCTAGCACTGCTGC
TGCTGCTGCTGCTGCTGCTAGACCGCGAAAGGCCACGACCGCTCCCGCCA
CCAATACCAAGACGGCAGCCTCGAGGGCGAAGGCCTACAGGGCGAGCAAA
ACTGCGTCCTCCCGAGGCTCGCCTACTAGCGTATCCGACGGCGGCAGCGG
CAGCAGTAACCCATCGGGCGTGGCATCAAAGGGGGGGGACGCCACCATGA
GAAACGCTGCCGTAAAAGGGGGTGGGGCGAGGAGGGGGGTGGATCGGAAG
CAGCCTGCGGTGCCCCCAGGGGTGGAAGGCACGTGCGACACGGGGGGGGG
CGTTGGGGAG
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