mRNA_E-fasciculatus_F_contig13181.2401.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: D7G0A0_ECTSI (Vacuolar protein sorting-associated protein 54 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A0_ECTSI) HSP 1 Score: 389 bits (999), Expect = 4.160e-125 Identity = 210/221 (95.02%), Postives = 210/221 (95.02%), Query Frame = 1
Query: 4 ALSELMERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQVFRPSAPAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRREAGVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 666
ALSELMERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKW QADVTPERQAVLDRLSSGQVFRPS AA ANG DGKEGSG GGG S Y NGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRREA VGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV
Sbjct: 632 ALSELMERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWTQADVTPERQAVLDRLSSGQVFRPSVSAANANGTDGKEGSGAGGG--SGYDNGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRREAVVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 850
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A7S2FL57_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FL57_9STRA) HSP 1 Score: 133 bits (334), Expect = 5.380e-33 Identity = 90/224 (40.18%), Postives = 130/224 (58.04%), Query Frame = 1
Query: 13 ELMERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQVFRPSA---PAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRRE---AGVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 666
EL ++SV LL +R++ + T L ++ELK +W++T F+ ++ER+SG + Y LRST+L+QAKAF+E + E +LV LD+EKW QADV+P+RQ +DRLSSGQ F P P N + +++ G ++ P + + G GGR RRE A V G+SFK V S LL+ EM L A HFP + TD+L R+ EL+R+
Sbjct: 38 ELAQKSVGNLLVMRKDVHTT-LTIEELKEMWNVTFEFLTAMERISGRSCYALRSTMLAQAKAFLEHKQEVQMASLVATLDSEKWTQADVSPQRQQAIDRLSSGQAFLPGTLVTPTNKPNDHXXXXXXXXDNPVAATAAAGEVKRPSETEGRAVTTGRTDRGGRS------RRELNDASVDGSSFKVVWSVLLLIEMVTAHLAIAAHFPMLATDVLQRVVELVRL 254
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A7S2S5D4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5D4_9STRA) HSP 1 Score: 132 bits (332), Expect = 9.610e-33 Identity = 91/221 (41.18%), Postives = 124/221 (56.11%), Query Frame = 1
Query: 13 ELMERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQVFRP-SAPAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRR--EAGVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 666
+L ++++S LL +R+E + T L ++ELK LW T F+Q VE+LSG + Y LRSTLL+QAKAF+E +HEA +LV LD+EKWAQADV+ ERQA LDRLS+GQ F P S P L+ +S K + +R EA V G+ +K V S LL+ EM + L A HFP + TD+L R+ EL+R+
Sbjct: 52 DLAQKTISNLLVMRKEVHTT-LSLEELKELWSATFEFLQLVEKLSGRSCYGLRSTLLAQAKAFLEHKHEAQLASLVATLDSEKWAQADVSSERQAALDRLSNGQAFLPRSYPK--------------------------LQTQTSXXXXXXXXATLQSSSAKRAKGTKREVGEAMVEGSRYKVVWSVLLLMEMVMSLLATAAHFPMLATDVLQRIVELVRL 245
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A7S1TZU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZU2_9STRA) HSP 1 Score: 129 bits (325), Expect = 6.490e-31 Identity = 88/222 (39.64%), Postives = 118/222 (53.15%), Query Frame = 1
Query: 13 ELMERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQVFRPSAPAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQ----PNFVGGARSGGRKGGRAERRREAGVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 666
EL +RS+ L+ +R+E N L +++LK LWD + FI VE+L+G GY+LR TLLSQAK F+E + + K +LV LDAE+W +ADVTPERQA L+RL SG F A A + L G P + P G GRK RR + +GG FK V S LL+ EMS + L FP + D+L RL EL+++
Sbjct: 545 ELAQRSIVSLILMRKEQNFC-LALEDLKALWDTVMRFIMQVEKLAGVTGYELRGTLLSQAKGFLEKKVQVQKASLVSTLDAERWVRADVTPERQAALERLVSGHAFLRVADLAKSE----------------------SPLAGSPVSSNAGSPTAANGDAHTGRK-----RREDVVLGGRRFKVVWSVLLLLEMSTDLLSILAIFPALVVDVLQRLLELVKL 738
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A7S4RD23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RD23_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.240e-26 Identity = 80/221 (36.20%), Postives = 115/221 (52.04%), Query Frame = 1
Query: 4 ALSELMERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQVFRPSAPAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRREAGVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 666
A SEL +S+S+LL +R++ + + + DE+K LWD ++AF +E+ SG Y LR TLL+QAKAFVE +HEAN +LV LD E+W Q DVT ERQA L RL SG+ + GN G+ P S + + +A V G +K V S LL+ EM + + A HF T+ T+++ ++ ELLR+
Sbjct: 418 ASSELAHKSISELLRLRKDSH-SLITFDEMKLLWDTSLAFTLQLEKYSGRKAYNLRGTLLAQAKAFVERKHEANMASLVAALDGERWTQCDVTAERQAALTRLCSGRAVLSTNKITNRRGNS----------------------TGNDPTNITTXXXXSS------KKNKMSDAEVEGKRYKVVWSCLLLVEMVMSNVACAAHFQTLATNVVGKVVELLRL 609
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A7S2XS08_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS08_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.270e-26 Identity = 84/226 (37.17%), Postives = 125/226 (55.31%), Query Frame = 1
Query: 4 ALSELMERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQV-----FRPSAPAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRREAGVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 666
A +EL+ERSVS+LL +R+E + + + +E++HLWD ++F S+ER SG Y LRSTLL+QAKAFVE +HE+N L LD+E+W Q DV+ ERQA L RL SG+ F P+++ N V +S+ NG + G ++ +A V G +K V S LL+ EM + + A HF T+ T+++ ++ ELLR+
Sbjct: 597 AAAELIERSVSELLRMRKEAH-SLVTFEEMRHLWDTCLSFTLSLERASGGKAYGLRSTLLAQAKAFVERKHESNMANLAAALDSERWTQCDVSTERQASLIRLCSGRAVLSYTFGGDTPSSSTTTN-------VNNATTSTTVNGTPKKDG----------------------KKLADAEVEGIRYKVVWSCLLLVEMVMSNVACAAHFQTLATNVVGKVSELLRL 792
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A835YJU9_9STRA (Vacuolar protein sorting-associated protein 54 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU9_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.140e-26 Identity = 86/226 (38.05%), Postives = 117/226 (51.77%), Query Frame = 1
Query: 1 KALSELMERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQVFR----PSAPAATANGNDGKEGSGVGGGGSSSYGNGGLRLPGDPPAQPNFVGGARSGGRKGGRAERRREAGVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRV 666
+A ++L+ERS+SQL+ VRR+ + T L +L+ L D + F VE L G +G KLR TLL+Q KA+VE H+ANK LV DV+PERQA++D ++ G V PS AA+ NG PA RS +R+REA + GA +KAV S LL+ EM+ N L+ A +FP D+L RL ELLR+
Sbjct: 596 RAAADLVERSLSQLVGVRRDLHATSLSPQQLRALCDAALEFTSKVEALCGSSGSKLRVTLLNQTKAYVECHHDANKTKLV-----------DVSPERQAMMDHITGGHVLSHALAPSHLAASMNGAS--------------------------PAAAFAPQSTRS-------KDRKREALLEGARYKAVWSTLLLVEMAYNQLRMAAYFPAAAPDVLGRLSELLRL 777
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A7S2RDT9_9STRA (Vacuolar protein sorting-associated protein 54 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RDT9_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.900e-22 Identity = 56/108 (51.85%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 4 ALSELMERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQV 327
A +EL +SV++LL +R+E + + + DE+K LWD +AF +E+ SG Y LRSTLL+QAKAFVE +HE+N +LV LD EKW+Q+DV+ ERQA L RL SG+
Sbjct: 410 AAAELSHKSVTELLRLRKEAH-SLVSFDEMKRLWDSCLAFTLQLEKYSGQKAYGLRSTLLAQAKAFVERQHESNMASLVAALDGEKWSQSDVSYERQATLTRLCSGRA 516
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: A0A7S2W529_9STRA (Vacuolar protein sorting-associated protein 54 n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W529_9STRA) HSP 1 Score: 104 bits (260), Expect = 3.100e-22 Identity = 56/108 (51.85%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 4 ALSELMERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQV 327
A +EL +SV++LL +R+E + + + DE+K LWD +AF +E+ SG Y LRSTLL+QAKAFVE +HE+N +LV LD EKW+Q+DV+ ERQA L RL SG+
Sbjct: 410 AAAELSHKSVTELLRLRKEAH-SLVSFDEMKRLWDSCLAFTLQLEKYSGQKAYGLRSTLLAQAKAFVERQHESNMASLVAALDGEKWSQSDVSYERQATLTRLCSGRA 516
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Match: B8C131_THAPS (Vps54 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C131_THAPS) HSP 1 Score: 104 bits (259), Expect = 4.550e-22 Identity = 58/117 (49.57%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 4 ALSELMERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQAVLDRLSSGQV-FRPSAPAA 351
A ++L E+SVS+LL +RRE + + + D ++ LWD ++ F +ER SG Y LRSTLL+QAK+FVE +HEAN TLV LD+E+W Q V+ +RQA L RL SG+ F PAA
Sbjct: 969 AAADLSEKSVSELLRLRREAH-SLVSFDGMRQLWDTSLTFTLQLERFSGRKAYGLRSTLLAQAKSFVERKHEANMSTLVAALDSERWVQCTVSADRQAALTRLCSGRAAFTSRKPAA 1084 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13181.2401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13181.2401.1 >prot_E-fasciculatus_F_contig13181.2401.1 ID=prot_E-fasciculatus_F_contig13181.2401.1|Name=mRNA_E-fasciculatus_F_contig13181.2401.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=216bp MERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLback to top mRNA from alignment at E-fasciculatus_F_contig13181:814..3153+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13181.2401.1 ID=mRNA_E-fasciculatus_F_contig13181.2401.1|Name=mRNA_E-fasciculatus_F_contig13181.2401.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2340bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13181:814..3153+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13181:814..3153+ >mRNA_E-fasciculatus_F_contig13181.2401.1 ID=mRNA_E-fasciculatus_F_contig13181.2401.1|Name=mRNA_E-fasciculatus_F_contig13181.2401.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1296bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13181:814..3153+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |