prot_E-fasciculatus_F_contig13080.2331.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13080.2331.1
Unique Nameprot_E-fasciculatus_F_contig13080.2331.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length271
Homology
BLAST of mRNA_E-fasciculatus_F_contig13080.2331.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 499 bits (1286), Expect = 1.560e-176
Identity = 232/264 (87.88%), Postives = 241/264 (91.29%), Query Frame = 0
Query:    1 MLDSSGNKLTAPTSVTKRWLLEAELYVTDGAIFYCIGSDEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGRAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCRDLSNPDVFETTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNLMHDNFQYGFDPHDDSDYLTIANNKVYNNHNHGIIASKRCNNXXXXXXEVYDGGPDAVGIFLHRSSDNAEVYG 264
            MLD SGNK+T+PTSVTK+WLLE+ELYVTDGAIFYCIGS+EGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDG+AKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFC+DLSNPDVFETTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN MHDN QYGFDPHDDSDYLTIA             ASKRCNN      EV DGGP+AVGIFLHRSSDNAEVYG
Sbjct:    1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG 264          
BLAST of mRNA_E-fasciculatus_F_contig13080.2331.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 481 bits (1239), Expect = 6.580e-168
Identity = 229/275 (83.27%), Postives = 240/275 (87.27%), Query Frame = 0
Query:    1 MLDSSGNKLTAPTSVTKRWLLEAELYVTDGAIFYCIGSDEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGRAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVR---------GFCRDLSNPDVFETTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNLMHDNFQYGFDPHDDSDYLTIANNKVYNNHNHGIIASKRCNNXXXXXXEVYDGGPDAVGIFLHRSSDNAEVYGKK 266
            MLD SG+K+TAPTSVTK+WLLEAELYVT+GAIFYCIGS+EGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNK+PQETYEGGRSFLNCVSEKLTGETCDG AKND GECRMDIINSEMGYMGFFD+ESYGLTWKVR         GFC+DLSNPDVFETTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN MHDN QY            +ANNKVYNN+NHGIIASKRCNN      +V DGGPDAVGIFLHRSSDNAEVYG K
Sbjct:   46 MLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNK 308          
BLAST of mRNA_E-fasciculatus_F_contig13080.2331.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 434 bits (1117), Expect = 5.540e-144
Identity = 195/263 (74.14%), Postives = 222/263 (84.41%), Query Frame = 0
Query:    1 MLDSSGNKLTAPTSVTKRWLLEAELYVTDGAIFYCIGSDEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGRAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCRDLSNPDVFETTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNLMHDNFQYGFDPHDDSDYLTIANNKVYNNHNHGIIASKRCNNXXXXXXEVYDGGPDAVGIFLHRSSDNAEVY 263
            MLD  G KL  P+ +T  WLL AELY+T G +FYC G+  GGDC++LRIQSTG DD++EVRGHGGS+YF  T+VTSWDTPNK+PQETYE GRSFLNCVSEKLTG+ C+G AKN+ GECRMDIINSE+ Y+G+FD+ESYG+TWKVRGFC+DLSNP+VFE TNVYGD+  SDIHH+YYG YSYGHQGGVWTNN MHDN+QYGFDPHDDSDYLTIA N+VYNN NHGIIASKRCNN      EV DGG  A GIFLHRSSD A V+
Sbjct:  473 MLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVF 735          
BLAST of mRNA_E-fasciculatus_F_contig13080.2331.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 401 bits (1030), Expect = 8.990e-138
Identity = 186/271 (68.63%), Postives = 214/271 (78.97%), Query Frame = 0
Query:    1 MLDSSGNKLTAPTSVTKRWLLEAELYVTDGAIFYCIGSDEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGRAKNDEGECRMDIINSEMGYMGFFDAESYGLTWK--------VRGFCRDLSNPDVFETTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNLMHDNFQYGFDPHDDSDYLTIANNKVYNNHNHGIIASKRCNNXXXXXXEVYDGGPDAVGIFLHRSSDNAEVY 263
            MLD  G KL  P+ +T  WLL AELY+T G +FYC G+  GGDC++LRIQSTG DD++EVRGHGGS+YF  T+VTSWDTPNK+PQETYEGGRSFLNCVSEKLTG+ C+G AKN+ GECRMDIINSE+ Y+G+FD+ESYG+TWK        VRGFC+DLSNP+VF+ TNVYGD+  SDIHH+YYG YSYGHQGGVWTNN MHDN+QYGFDPHDDSDYLT             IIASKRCNN      EV DGG  AVGIFLHRSSD+A V+
Sbjct:   22 MLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTR------------IIASKRCNNVKIFENEVRDGGAAAVGIFLHRSSDDAAVF 280          
BLAST of mRNA_E-fasciculatus_F_contig13080.2331.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 399 bits (1024), Expect = 1.810e-134
Identity = 187/262 (71.37%), Postives = 209/262 (79.77%), Query Frame = 0
Query:    2 LDSSGNKLTAPTSVTKRWLLEAELYVTDGAIFYCIGSDEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGRAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCRDLSNPDVFETTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNLMHDNFQYGFDPHDDSDYLTIANNKVYNNHNHGIIASKRCNNXXXXXXEVYDGGPDAVGIFLHRSSDNAEVY 263
            LD S N +  P  ++ +WLL AEL++T GA+FYC GS  GGDCDELRIQSTGP D++EVR HGGSMYF  T+VTSWDTPNK PQ TY GGRSFLNCVSEKLTGE C G+A+N+ GECRMDIINSE+GY+G+FD+ESYGLTWKVRGFC+DLSNPDVF+TTNVYG++  SDIHH YYG YSYGHQGGVW NN MHDN QYGFDPHDDSDYLT             IIASKRCNN      EVYDGGP A GIFLHRSSD A V+
Sbjct:  111 LDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVH 360          
BLAST of mRNA_E-fasciculatus_F_contig13080.2331.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 390 bits (1001), Expect = 4.830e-132
Identity = 182/265 (68.68%), Postives = 211/265 (79.62%), Query Frame = 0
Query:    1 MLDSSGNKLTAPTSVTKRWLLEAELYVTDGAIFYCIGSDEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGE-TCDGRAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCRDLSNPDVFETTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNLMHDNFQYGFDPHDDSDYLTIANNKVYNNHNHGIIASKRCNNXXXXXXEVYDGGPDAVGIFLHRSSDNAEVYG 264
            +LDS+       T+ T +WLL A+L+VT GA  YC G   GG+C ELRI+ST   D++E+RGHGG++YF  T+VTSWD   +KPQETY+ GRSF+ CVSE LTGE TC   A N+ GECRMDII+SEMGY+G+  +E+YG+TWKVRGFC DLSNPDVF+  NVYGD+K SDIHHMYYGMYS+GHQGGVWTNNLMHDN QYGFDPHDDSDYL IA NKVYNN NHGIIASKRCNN      EVYDGG DA GIFLHRS D++EVYG
Sbjct:   35 VLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYG 296          
BLAST of mRNA_E-fasciculatus_F_contig13080.2331.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 1.110e-100
Identity = 160/266 (60.15%), Postives = 189/266 (71.05%), Query Frame = 0
Query:    1 MLDSSGNKLTAPTSVTKRWLLEAELYVTDGAIFYCIGSDEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTG--ETCDGRAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCRDLSNPDVFETTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNLMHDNFQYGFDPHDDSDYLTIANNKVYNNHNHGIIASKRCNNXXXXXXEVYDGGPDAVGIFLHRSSDNAEVYG 264
            +LDS+ N +    S T  WLL  +++V +G++    G D GGD   LRIQSTG  D+YE+RGHGGS+ F  T VTSWDT  KK    Y+  RSF+ CVSE+L    +TCDG A N  GECRMDII SEMG MG+  AESYG++WKVRG+C +  NP+VFE T V GDI +SDI+ MYYG YS+GH GG+WT N MHDN QYGFDPHDDSD L IA N V+ N NHGIIASKRCNN       VYDGG  AVGIFLHRSSD+ EV+G
Sbjct:  428 VLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWG 691          
BLAST of mRNA_E-fasciculatus_F_contig13080.2331.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 4.830e-99
Identity = 151/262 (57.63%), Postives = 182/262 (69.47%), Query Frame = 0
Query:    5 SGNKLTAPTSVTKRWLLEAELYVTDGAIFYCIGSDEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGE--TCDGRAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCRDLSNPDVFETTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNLMHDNFQYGFDPHDDSDYLTIANNKVYNNHNHGIIASKRCNNXXXXXXEVYDGGPDAVGIFLHRSSDNAEVYG 264
            SGN     TS T  WLL  ELYV DG      GS+ GGD DELR+ ST  + +  +R HGGS+ F  T V SWDT    P E    GRS+++ +SE +T E  TC+G AKN  GE RMDI +SE+GY+G++D+ESYGLTWKVRGFC D SNP+VF+  NVYG++ +SDIHHM +G+Y+YGHQ G W  N MHDN  YGFDPHDDSD+LTI +N+VYNN  HGIIASKRCN       EVY G   + GIFLHRSSD+A V G
Sbjct:   92 SGN---VSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTN-ETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKG 349          
BLAST of mRNA_E-fasciculatus_F_contig13080.2331.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 1.090e-97
Identity = 151/262 (57.63%), Postives = 182/262 (69.47%), Query Frame = 0
Query:    5 SGNKLTAPTSVTKRWLLEAELYVTDGAIFYCIGSDEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGE--TCDGRAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCRDLSNPDVFETTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNLMHDNFQYGFDPHDDSDYLTIANNKVYNNHNHGIIASKRCNNXXXXXXEVYDGGPDAVGIFLHRSSDNAEVYG 264
            SGN     TS T  WLL  ELYV DG      GS+ GGD DELR+ ST  + +  +R HGGS+ F  T V SWDT    P E    GRS+++ +SE +T E  TC+G AKN  GE RMDI +SE+GY+G++D+ESYGLTWKVRGFC D SNP+VF+  NVYG++ +SDIHHM +G+Y+YGHQ G W  N MHDN  YGFDPHDDSD+LTI +N+VYNN  HGIIASKRCN       EVY G   + GIFLHRSSD+A V G
Sbjct:   92 SGN---VSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTN-ETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKG 349          
BLAST of mRNA_E-fasciculatus_F_contig13080.2331.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 3.450e-97
Identity = 148/251 (58.96%), Postives = 178/251 (70.92%), Query Frame = 0
Query:   16 TKRWLLEAELYVTDGAIFYCIGSDEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGE--TCDGRAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCRDLSNPDVFETTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNLMHDNFQYGFDPHDDSDYLTIANNKVYNNHNHGIIASKRCNNXXXXXXEVYDGGPDAVGIFLHRSSDNAEVYG 264
            T  WLL  ELYV DG      G+DEGGD DELR+ ST  + +  +R HGGS+ F  T V SWDT    P E    GRS+++ VSE +T E  TC+G AKN  GE RMDI NSE+GY+GF D+ESYGLTWKVRGFC+D SNP++F+  NVYG++ +SDIHH+ +G+Y+YGHQ G W  N MHDN  YGFDPHDDSD+LTI +N+VYNN  HGIIASKRCN       EVY G   + GIFLHRSSD+A V G
Sbjct:  104 TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTS-ETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKG 353          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13080.2331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIU4_ECTSI1.560e-17687.88Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JGU8_9PHAE6.580e-16883.27MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LC73_ECTSI5.540e-14474.14Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6H5KWQ2_9PHAE8.990e-13868.63MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LRM4_ECTSI1.810e-13471.37Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D7FRR8_ECTSI4.830e-13268.68Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF5_9PHAE1.110e-10060.15MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FXE5_ECTSI4.830e-9957.63Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI1.090e-9757.63Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI3.450e-9758.96Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 161..182
e-value: 2500.0
score: 4.3
coord: 231..255
e-value: 170.0
score: 11.0
coord: 207..229
e-value: 2.9
score: 16.9
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 162..264
e-value: 6.5E-11
score: 42.3
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 2..266
e-value: 6.6E-71
score: 241.2
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 161..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13080contigE-fasciculatus_F_contig13080:247..3619 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13080.2331.1mRNA_E-fasciculatus_F_contig13080.2331.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13080 247..3619 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13080.2331.1 ID=prot_E-fasciculatus_F_contig13080.2331.1|Name=mRNA_E-fasciculatus_F_contig13080.2331.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=271bp
MLDSSGNKLTAPTSVTKRWLLEAELYVTDGAIFYCIGSDEGGDCDELRIQ
STGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSE
KLTGETCDGRAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCRD
LSNPDVFETTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNLMHDNFQYG
FDPHDDSDYLTIANNKVYNNHNHGIIASKRCNNVKIYNNEVYDGGPDAVG
IFLHRSSDNAEVYGKKKEKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR006626PbH1