mRNA_E-fasciculatus_F_contig13060.2321.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13060.2321.1 vs. uniprot
Match: A0A6H5KGH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH5_9PHAE) HSP 1 Score: 169 bits (429), Expect = 1.050e-51 Identity = 83/107 (77.57%), Postives = 86/107 (80.37%), Query Frame = 1
Query: 1 SVECAGQFDLPVLGGVDVVEYWRLPLAAEPVLGSPNLMSVLGDYRFFFSTAENLRVFENDKLKYVPAWGGFCSYGVANEPVWTHTTLGPFGNPSKWGIYGGRLHIFR 321
S ECAGQFDLPVLGGVDVVEYW LPLAAE VLGSPNLMSV G+YRFFFS+ ENLRVFE A G +ANEPVWT TTLGPFGNPSKWGIYGGRLHIFR
Sbjct: 25 SAECAGQFDLPVLGGVDVVEYWSLPLAAEAVLGSPNLMSVFGNYRFFFSSVENLRVFEARGFSLRSA-GEKIWQRIANEPVWTSTTLGPFGNPSKWGIYGGRLHIFR 130
BLAST of mRNA_E-fasciculatus_F_contig13060.2321.1 vs. uniprot
Match: D7FW13_ECTSI (YHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW13_ECTSI) HSP 1 Score: 155 bits (392), Expect = 4.240e-45 Identity = 67/109 (61.47%), Postives = 83/109 (76.15%), Query Frame = 1
Query: 1 SVECAGQFDLPVLGGVDVVEYWRLPLAAEPVLGSPNLMSVLGDYRFFFSTAENLRVFENDKLKYVPAWGGFCSYGVANEPVWTHTTLGPFGNPSKWGIY--GGRLHIFR 321
+ +C G LPVLGGVDVV YW LP ++PV G+PNL+S+ GDYRF+FS+ ENLR FE+D ++Y+PAWGGFCSYGVA E W LGPFG+PSKW I G+LH+FR
Sbjct: 103 TADCTGDTHLPVLGGVDVVAYWTLPAGSKPVFGTPNLVSLFGDYRFYFSSIENLRTFESDPVRYIPAWGGFCSYGVAAETFWRPDILGPFGDPSKWLILPGDGKLHVFR 211
BLAST of mRNA_E-fasciculatus_F_contig13060.2321.1 vs. uniprot
Match: D7FW14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW14_ECTSI) HSP 1 Score: 112 bits (281), Expect = 5.000e-30 Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 1
Query: 160 LRVFENDKLKYVPAWGGFCSYGVANEPVWTHTTLGPFGNPSKWGIYGGRLHIFR 321
LR ++DKLKYVPAWGGFCSYG+ANE VWT TTLGPFGNPSKWGIYGGRLHIFR
Sbjct: 15 LRFSQHDKLKYVPAWGGFCSYGIANESVWTSTTLGPFGNPSKWGIYGGRLHIFR 68
BLAST of mRNA_E-fasciculatus_F_contig13060.2321.1 vs. uniprot
Match: A0A7S3UVA0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVA0_HETAK) HSP 1 Score: 96.7 bits (239), Expect = 7.470e-23 Identity = 49/106 (46.23%), Postives = 58/106 (54.72%), Query Frame = 1
Query: 1 SVECAGQFDLPVLGGVDVVEYWRLPLAAEPVLGSPNLMSVLGDYRFFFSTAENLRVFENDKLKYVPAWGGFCSYGVANEPVWTHTTLGPFGNPSKWGIYGGRLHIF 318
S C PVL G DVV Y+ L + V GS SV + F+FS+ EN+ FE+D KYVPAWGGFC+YGVA E WT T+ P W I GRL F
Sbjct: 5 SAACLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLFFF 110
BLAST of mRNA_E-fasciculatus_F_contig13060.2321.1 vs. uniprot
Match: A0A7S3JR48_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JR48_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 4.880e-22 Identity = 47/106 (44.34%), Postives = 59/106 (55.66%), Query Frame = 1
Query: 1 SVECAGQFDLPVLGGVDVVEYWRLPLAAEPVLGSPNLMSVLGDYRFFFSTAENLRVFENDKLKYVPAWGGFCSYGVANEPVWTHTTLGPFGNPSKWGIYGGRLHIF 318
S C PVL G DVV Y L + A +GS + + G+Y F+F AEN F ++ KYVP +GGFCSYG+ NE WT TLGP N + W IY L +F
Sbjct: 136 SSSCVDPSAGPVLEGADVVAYRYLNVGANATIGSADYAAKYGEYTFYFENAENRATFLSNPDKYVPKFGGFCSYGITNEFFWTKDTLGPNANKNVWIIYDDHLFVF 241
BLAST of mRNA_E-fasciculatus_F_contig13060.2321.1 vs. uniprot
Match: A0A6H5JXZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ9_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 7.140e-21 Identity = 46/108 (42.59%), Postives = 58/108 (53.70%), Query Frame = 1
Query: 1 SVECAGQFDLPVLGGVDVVEYWRLPLAAEPVLGSPNLMSVLGD-YRFFFSTAENLRVFENDKLKYVPAWGGFCSYGVANEPVWTHTTLGPFGNPSKWGIYGGRLHIFR 321
+ EC G P + G D+V Y L V G G Y F FST EN FE+D KY+PAWGGFCS+G+++E +W LGP NP W I RL++FR
Sbjct: 101 TAECTGDTSKPAVKGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENQLEFESDPEKYLPAWGGFCSFGISHEDIWGPDVLGPPSNPDIWLIEDDRLYLFR 208
BLAST of mRNA_E-fasciculatus_F_contig13060.2321.1 vs. uniprot
Match: A0A7S3UXT1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXT1_HETAK) HSP 1 Score: 91.7 bits (226), Expect = 5.340e-20 Identity = 46/98 (46.94%), Postives = 58/98 (59.18%), Query Frame = 1
Query: 31 PVLGGVDVVEYWRLPLAAEPVLGSPNLMSVLGDYRFFFSTAENLRVFENDKLKYVPAWGGFCSYGVANEPVWTHTTL--GPFGNPSKWGIYGGRLHIF 318
PV G DVV Y+ L ++ VLGSP S+ Y F+FST EN FE+ YVPAWGGFCSYGV+ E WT T+ G + + W + GRL +F
Sbjct: 93 PVASGYDVVAYFDLDPLSDGVLGSPEFTSIYKGYTFYFSTRENQDRFESSPETYVPAWGGFCSYGVSQESWWTAETMRAGVYAS-GAWRVVDGRLFLF 189
BLAST of mRNA_E-fasciculatus_F_contig13060.2321.1 vs. uniprot
Match: D7FW15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW15_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 7.650e-20 Identity = 45/108 (41.67%), Postives = 57/108 (52.78%), Query Frame = 1
Query: 1 SVECAGQFDLPVLGGVDVVEYWRLPLAAEPVLGSPNLMSVLGD-YRFFFSTAENLRVFENDKLKYVPAWGGFCSYGVANEPVWTHTTLGPFGNPSKWGIYGGRLHIFR 321
+ EC G P + G D+V Y L V G G Y F FST EN FE+D +Y+PAWGGFC +G+++E VW LGP NP W I RL++FR
Sbjct: 101 TAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCGFGISHEVVWGPDVLGPPSNPDFWLIEDDRLYLFR 208
BLAST of mRNA_E-fasciculatus_F_contig13060.2321.1 vs. uniprot
Match: D7G5N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N6_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 3.480e-19 Identity = 46/106 (43.40%), Postives = 58/106 (54.72%), Query Frame = 1
Query: 7 ECAGQFDLPVLGGVDVVEYWRLPLAAEPVLGSPNLMSVLGDYRFFFSTAENLRVFENDKLKYVPAWGGFCSYGVANEPVWTHTTLGPFGNPSKWGIYGGR-LHIFR 321
EC G PVL G DVV Y+ L + G Y F F++A+N +FE L Y+PAWGGFC+YG+A E WT +TLGP +P+ W I L IFR
Sbjct: 74 EC-GTSTEPVLNGADVVSYFSLKEGEAAMYGFEEYPVKYNGYTFLFASAQNKALFEASPLDYIPAWGGFCAYGIAAEDWWTVSTLGPPSDPNSWLITDDNVLRIFR 178
BLAST of mRNA_E-fasciculatus_F_contig13060.2321.1 vs. uniprot
Match: A0A7S2US34_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US34_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 3.390e-17 Identity = 42/114 (36.84%), Postives = 65/114 (57.02%), Query Frame = 1
Query: 1 SVECAGQFDLPVLGGVDVVEYWRLPLAAEPVLGSPNLMSVL----GDYRFFFSTAENLRVFENDKLKYVPAWGGFCSYGVANEPVWTHTT----LGPFGNPSKWGIYGGRLHIF 318
+ C D PVLGGVDVV Y ++P+ + V+GS + S + GD+ F+FST ENL +FE D Y P GGF + +++ + T LGP + ++W + G+L++F
Sbjct: 106 KLACCTAQDRPVLGGVDVVSYHQIPMGSPSVMGSADFQSTISTSNGDFIFYFSTQENLELFEKDHWSYAPEMGGFDAQAISSNDEYGATDVKEQLGPQVDVNQWAVIHGKLYLF 219 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13060.2321.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13060.2321.1 >prot_E-fasciculatus_F_contig13060.2321.1 ID=prot_E-fasciculatus_F_contig13060.2321.1|Name=mRNA_E-fasciculatus_F_contig13060.2321.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=109bp SVECAGQFDLPVLGGVDVVEYWRLPLAAEPVLGSPNLMSVLGDYRFFFSTback to top mRNA from alignment at E-fasciculatus_F_contig13060:129..1398- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13060.2321.1 ID=mRNA_E-fasciculatus_F_contig13060.2321.1|Name=mRNA_E-fasciculatus_F_contig13060.2321.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1270bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13060:129..1398- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13060:129..1398- >mRNA_E-fasciculatus_F_contig13060.2321.1 ID=mRNA_E-fasciculatus_F_contig13060.2321.1|Name=mRNA_E-fasciculatus_F_contig13060.2321.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=654bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13060:129..1398- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |