prot_E-fasciculatus_F_contig13058.2318.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13058.2318.1 vs. uniprot
Match: D8LGR2_ECTSI (Ribosomal protein L25, Ctc-form n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGR2_ECTSI) HSP 1 Score: 329 bits (843), Expect = 3.730e-111 Identity = 182/221 (82.35%), Postives = 190/221 (85.97%), Query Frame = 0
Query: 4 AGKVPGVVYSNSDNRGDSARSGGRGIGRPADDPILVKVDKIVLDREIRRLNASFDNTVYDLVIEGETSSGDDAADDGIEVTVADPGAGGNRD-QXXXXXXXXXXXXXXXXXXXXQKPERRELVLANQSRLHPVFRTLLSVNWIRYKAGRKYPIPIKFINNDLNENFRKGAYIRR-RTHQHILLPEDPEMVPKWLYLDLEFVRSGSK--VSQLPCPESLPRH 220
AGKVPGVVYSNSDNRG S+R GG G+GRPADDPILVKVDKIVLDRE+RRLNASFDNTVYDLVIEGETSSGDDAADDGIEVTV DPGAGG+R + XXXXXX PERRELVLANQSRLHPVFRTLLSVNWIRYKAGRKYPIPIKFIN+DLNENFRKGAYIRR +THQHILLPEDPEMVPKWLYLDLEFVRSGSK VS L PE + H
Sbjct: 34 AGKVPGVVYSNSDNRGHSSRPGG-GVGRPADDPILVKVDKIVLDREVRRLNASFDNTVYDLVIEGETSSGDDAADDGIEVTVTDPGAGGDRGKEEEEGVSAGEGGVEGXXXXXXXXPERRELVLANQSRLHPVFRTLLSVNWIRYKAGRKYPIPIKFINSDLNENFRKGAYIRRLKTHQHILLPEDPEMVPKWLYLDLEFVRSGSKLRVSDLMMPEGILLH 253
BLAST of mRNA_E-fasciculatus_F_contig13058.2318.1 vs. uniprot
Match: A0A397C844_9STRA (Ribosomal_TL5_C domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C844_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 1.570e-6 Identity = 30/84 (35.71%), Postives = 47/84 (55.95%), Query Frame = 0
Query: 125 VLANQSRLHPVFRTLLSVNWIRYKAGRKYPIPIKFINNDLNENFRKGAYIRRRTHQHILLPEDPEMVPKWLYLDLEFVRSGSKV 208
VL + LHPV SVN++RYK GRK IP+ F+N + + ++G YI H+ I E++P LY+D+ + G ++
Sbjct: 104 VLLRDATLHPVTDIPQSVNFLRYKPGRKVHIPLDFLNQEGSPGLKRGGYINNVYHE-IPCTIASEVIPAKLYVDVNGMHVGERI 186
BLAST of mRNA_E-fasciculatus_F_contig13058.2318.1 vs. uniprot
Match: A0A3R6YZB1_9STRA (Ribosomal_TL5_C domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YZB1_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 4.010e-6 Identity = 29/84 (34.52%), Postives = 46/84 (54.76%), Query Frame = 0
Query: 125 VLANQSRLHPVFRTLLSVNWIRYKAGRKYPIPIKFINNDLNENFRKGAYIRRRTHQHILLPEDPEMVPKWLYLDLEFVRSGSKV 208
VL + LHPV SVN++RYK GRK IP+ F+N + + ++G YI H+ I E +P L++D+ + G ++
Sbjct: 103 VLLRDATLHPVTDVPQSVNFLRYKPGRKVHIPLDFLNQESSPGLKRGGYINNVYHE-IPCTIASEAIPTKLFVDVNGMHVGQRI 185
BLAST of mRNA_E-fasciculatus_F_contig13058.2318.1 vs. uniprot
Match: F0WKB2_9STRA (50S ribosomal protein L25 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WKB2_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 1.530e-5 Identity = 31/84 (36.90%), Postives = 46/84 (54.76%), Query Frame = 0
Query: 124 LVLANQSRLHPVFRTLLSVNWIRYKAGRKYPIPIKFINNDLNENFRKGAYIRRRTHQHILLPEDPEMVPKWLYLDLEFVRSGSK 207
L + + HPV L+VN+IRYK GRK IPI +IN + + ++G YI H+ + + E VPK L +D+ + SK
Sbjct: 113 LAIMRDVQFHPVTDIPLTVNFIRYKNGRKVSIPITYINEEGSPGIKRGGYINHIYHE-VECYINTEQVPKTLEIDVNGLDVDSK 195
BLAST of mRNA_E-fasciculatus_F_contig13058.2318.1 vs. uniprot
Match: A0A485LRJ8_9STRA (Aste57867_24188 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRJ8_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 3.520e-5 Identity = 28/84 (33.33%), Postives = 45/84 (53.57%), Query Frame = 0
Query: 125 VLANQSRLHPVFRTLLSVNWIRYKAGRKYPIPIKFINNDLNENFRKGAYIRRRTHQHILLPEDPEMVPKWLYLDLEFVRSGSKV 208
VL LHPV L+VN++RYK GRK IP+ ++N + + ++G YI H I E +P L++D+ + G ++
Sbjct: 105 VLLRDVTLHPVTDVPLTVNFLRYKPGRKVHIPLDYLNTEGSPGLKRGGYINNVRHD-IPCTIASEEIPAKLFVDVNGMHVGERI 187
BLAST of mRNA_E-fasciculatus_F_contig13058.2318.1 vs. uniprot
Match: A0A024G2B8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2B8_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 4.130e-5 Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 0
Query: 124 LVLANQSRLHPVFRTLLSVNWIRYKAGRKYPIPIKFINNDLNENFRKGAYIRRRTHQHILLPEDPEMVPKWLYLDLEFVRSGSK 207
L + + HPV L+VN+IRYK GRK IPI +IN + + ++G YI H+ + + + VPK L +D+ + SK
Sbjct: 825 LAIMRDVQFHPVTDLPLTVNFIRYKHGRKVSIPITYINEEGSPGLKRGGYINHICHE-VECYVNTDQVPKTLEIDVNGLDVDSK 907 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13058.2318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-fasciculatus_F_contig13058.2318.1 ID=prot_E-fasciculatus_F_contig13058.2318.1|Name=mRNA_E-fasciculatus_F_contig13058.2318.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=220bpback to top |