mRNA_E-fasciculatus_F_contig13050.2313.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13050.2313.1 vs. uniprot
Match: A0A6H5KDR8_9PHAE (Peptidase_M14 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDR8_9PHAE) HSP 1 Score: 102 bits (255), Expect = 3.730e-24 Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 1
Query: 1 LARLALTRSTVIMPMANAIGYYNTERYENGMDPNRDFPYSQHPDRCMTTITARQ 162
LARLALTRSTVIMPMAN+IGYYNT+R+ENGMDPNRDFPY Q P CMTTITARQ
Sbjct: 103 LARLALTRSTVIMPMANSIGYYNTDRWENGMDPNRDFPYGQMPQHCMTTITARQ 156
BLAST of mRNA_E-fasciculatus_F_contig13050.2313.1 vs. uniprot
Match: A0A812J4N1_9DINO (Pet127 protein (Fragment) n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812J4N1_9DINO) HSP 1 Score: 73.6 bits (179), Expect = 7.250e-14 Identity = 36/53 (67.92%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 7 RLALTRSTVIMPMANAIGYYNTERYENGMDPNRDFPYSQHPDRCMTTITARQV 165
RL RST +MPM NA GY N +R ENGMDPNRDFPY Q P RCM T TAR V
Sbjct: 818 RLVDGRSTWLMPMTNAHGYANYKREENGMDPNRDFPYLQMPQRCMQTQTARAV 870
BLAST of mRNA_E-fasciculatus_F_contig13050.2313.1 vs. uniprot
Match: A0A812RBD3_9DINO (Pet127 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812RBD3_9DINO) HSP 1 Score: 73.6 bits (179), Expect = 7.250e-14 Identity = 36/53 (67.92%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 7 RLALTRSTVIMPMANAIGYYNTERYENGMDPNRDFPYSQHPDRCMTTITARQV 165
RL RST +MPM NA GY N +R ENGMDPNRDFPY Q P RCM T TAR V
Sbjct: 825 RLVDGRSTWLMPMTNAHGYANYKREENGMDPNRDFPYLQMPQRCMQTQTARAV 877
BLAST of mRNA_E-fasciculatus_F_contig13050.2313.1 vs. uniprot
Match: A0A812PG50_9DINO (UVR3 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812PG50_9DINO) HSP 1 Score: 73.6 bits (179), Expect = 7.260e-14 Identity = 36/53 (67.92%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 7 RLALTRSTVIMPMANAIGYYNTERYENGMDPNRDFPYSQHPDRCMTTITARQV 165
RL RST +MPM NA GY N +R ENGMDPNRDFPY Q P RCM T TAR V
Sbjct: 1371 RLVDGRSTWLMPMTNAHGYANYKREENGMDPNRDFPYLQMPQRCMQTQTARAV 1423
BLAST of mRNA_E-fasciculatus_F_contig13050.2313.1 vs. uniprot
Match: A0A7S4JUS9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JUS9_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.180e-12 Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 LARLALTRSTVIMPMANAIGYYNTERYENGMDPNRDFPYSQ-HPDRCMTTITARQV 165
LARLA TR VI+P ANA+GY R ENG+DPNRDFPY Q P +CM TI R +
Sbjct: 316 LARLATTRRIVIVPAANALGYEFNRREENGIDPNRDFPYDQTDPSKCMRTIAGRTI 371
BLAST of mRNA_E-fasciculatus_F_contig13050.2313.1 vs. uniprot
Match: A0A7S4NAH1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NAH1_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.200e-12 Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 LARLALTRSTVIMPMANAIGYYNTERYENGMDPNRDFPYSQ-HPDRCMTTITARQV 165
LARLA TR VI+P ANA+GY R ENG+DPNRDFPY Q P +CM TI R +
Sbjct: 314 LARLATTRRIVIVPAANALGYEFNRREENGIDPNRDFPYDQTDPSKCMRTIAGRTI 369
BLAST of mRNA_E-fasciculatus_F_contig13050.2313.1 vs. uniprot
Match: A0A7S0Q7Z3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q7Z3_9EUKA) HSP 1 Score: 68.9 bits (167), Expect = 3.050e-12 Identity = 32/53 (60.38%), Postives = 36/53 (67.92%), Query Frame = 1
Query: 7 RLALTRSTVIMPMANAIGYYNTERYENGMDPNRDFPYSQHPDRCMTTITARQV 165
RL TR+ +IMPM NAIG R ENG+DPNRDFP+ Q P CM TI AR V
Sbjct: 190 RLVDTRNVLIMPMTNAIGVAQKTRAENGIDPNRDFPFDQSPSLCMQTIAARSV 242
BLAST of mRNA_E-fasciculatus_F_contig13050.2313.1 vs. uniprot
Match: A0A7S4ETP0_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ETP0_CHRCT) HSP 1 Score: 68.6 bits (166), Expect = 3.940e-12 Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 7 RLALTRSTVIMPMANAIGYYNTERYENGMDPNRDFPYSQHPDRCMTTITARQV 165
RL +R T+IMPM NA+G N R ENG+DPNRDFP+ Q P CM TI AR +
Sbjct: 110 RLVDSRVTLIMPMTNAVGVANKVRTENGIDPNRDFPFDQLPTACMQTIAARSI 162
BLAST of mRNA_E-fasciculatus_F_contig13050.2313.1 vs. uniprot
Match: A0A7S2RZJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RZJ4_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 4.160e-12 Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 LARLALTRSTVIMPMANAIGYYNTERYENGMDPNRDFPYS-QHPDRCMTTITARQV 165
+ARL TR VI+P ANA+GYY R ENG+DPNRDFP+ + P +CM TI R +
Sbjct: 195 MARLVQTRRIVIVPTANALGYYQNVREENGVDPNRDFPFEVEDPSKCMQTIAGRTI 250
BLAST of mRNA_E-fasciculatus_F_contig13050.2313.1 vs. uniprot
Match: A0A1Z5JJR0_FISSO (Peptidase_M14 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJR0_FISSO) HSP 1 Score: 68.2 bits (165), Expect = 5.710e-12 Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 1
Query: 1 LARLALTRSTVIMPMANAIGYYNTERYENGMDPNRDFPYS-QHPDRCMTTITAR 159
LARL TR V++P ANA+GYY +ER ENG+D NRDFP+ P +CMTTI R
Sbjct: 206 LARLLSTRRLVVVPTANALGYYRSERTENGVDANRDFPFDLTDPKQCMTTIAGR 259 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13050.2313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13050.2313.1 >prot_E-fasciculatus_F_contig13050.2313.1 ID=prot_E-fasciculatus_F_contig13050.2313.1|Name=mRNA_E-fasciculatus_F_contig13050.2313.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=57bp LARLALTRSTVIMPMANAIGYYNTERYENGMDPNRDFPYSQHPDRCMTTIback to top mRNA from alignment at E-fasciculatus_F_contig13050:1256..1821- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13050.2313.1 ID=mRNA_E-fasciculatus_F_contig13050.2313.1|Name=mRNA_E-fasciculatus_F_contig13050.2313.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=566bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13050:1256..1821- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13050:1256..1821- >mRNA_E-fasciculatus_F_contig13050.2313.1 ID=mRNA_E-fasciculatus_F_contig13050.2313.1|Name=mRNA_E-fasciculatus_F_contig13050.2313.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=342bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13050:1256..1821- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |