mRNA_E-fasciculatus_F_contig13036.2300.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13036.2300.1
Unique NamemRNA_E-fasciculatus_F_contig13036.2300.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: A0A6H5JVT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT8_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 7.380e-120
Identity = 172/265 (64.91%), Postives = 201/265 (75.85%), Query Frame = 1
Query:    1 QCWCGDNVGYAVNGDGDCDMPCSGNSDETCGGSYALSVYSNDEDYLGCWSDPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQHE-VVPYYNEDYIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGDNADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNRVLVQDASSDEMTSD 792
            +CWCGDNVGYA NG G CDMPC+GN+DE CGG YALS+YSND +YLGCWSDPYTAETRLFS +I  SDDMTTAVC+  CA +  YGTQYGTECWCDDGT++YDQNG AVCD ECAGSTDGEFCGGFDA+SIR H+ +V   N  Y+GCFSDPA +RIF L ASS+DMT+E                   CWCG+NA+YD NG    CDM C+G S ++CGGSYAMSVYEND V  VDPSYRGC++D  +NRV  Q  S  ++T++
Sbjct:   10 RCWCGDNVGYAENGPGVCDMPCTGNTDEVCGGQYALSIYSNDPNYLGCWSDPYTAETRLFSTRIDVSDDMTTAVCDDLCAIYPLYGTQYGTECWCDDGTSDYDQNGPAVCDYECAGSTDGEFCGGFDAISIRSHDAIVIGNNSSYVGCFSDPADNRIFALGASSDDMTAE-------------------CWCGNNAEYDVNGVGV-CDMACSGDSREVCGGSYAMSVYENDNVE-VDPSYRGCFADTADNRVFHQTTSDFDLTTE 253          
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: D7FH79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH79_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 6.110e-110
Identity = 162/266 (60.90%), Postives = 201/266 (75.56%), Query Frame = 1
Query:    1 QCWCGDNVGYAVNGDGDCDMPCSGNSDETCGGSYALSVYSNDED--YLGCWSDPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNEDYIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGDNADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNRVLVQDASSDEMTSD 792
            +CWCGDNV Y  NG+G CDM CSG+S +TCGG YA+SVY N +D  YLGC+SDP  A++R+F + +ATSDDMT+ +C  +C  + YYGTQY T+CWC D  A+YD NG   CDM C+G    E CGGF  MS+  +E V   +  Y+GC+SDPA SRIF+L A+S+DMTSE+CL  C AY YYGTQYST+CWCGDNADYDANGA E CDM C+G S ++CGG Y+MSVYENDV  PVD SYRGCYSDP ++R+ V+  SSD MT++
Sbjct:   60 ECWCGDNVDYDANGEGVCDMACSGDSSQTCGGFYAMSVYENPDDSGYLGCYSDP--ADSRIFEL-VATSDDMTSEICLGNCGAYQYYGTQYSTQCWCGD-NADYDANGAGECDMACSGDA-SEICGGFYTMSV--YENVDPVDPSYLGCYSDPADSRIFELVATSDDMTSEICLGNCGAYQYYGTQYSTQCWCGDNADYDANGAGE-CDMDCSGDSSEICGGFYSMSVYENDV-DPVDLSYRGCYSDPADSRIFVEAGSSDGMTAE 316          
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: D7G4P0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P0_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 1.230e-103
Identity = 145/196 (73.98%), Postives = 164/196 (83.67%), Query Frame = 1
Query:  208 MTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNEDYIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGDNAD-YDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNRVLVQDASSDEMTSD 792
            MTTAVCE  CA++AYYGTQYGTECWCD+GTA+Y QNG AVCD ECAGSTDGEFCGGFDAMSIRQHEV     ++Y+GCFSDPA +RIF+L  SS+DMT E+C   C AY YYGTQYSTECWCGD    YD NGA+EEC MPCAG + ++CGG Y+MSVY+NDV  PVDP+YRGCYSDPG NRV VQDASSDEMT+D
Sbjct:    1 MTTAVCEGLCANYAYYGTQYGTECWCDEGTADYAQNGLAVCDYECAGSTDGEFCGGFDAMSIRQHEVDTN-PDNYLGCFSDPADNRIFELVTSSDDMTEEVCSGHCSAYPYYGTQYSTECWCGDGETAYDTNGASEECVMPCAGDASEICGGPYSMSVYQNDVEIPVDPAYRGCYSDPGTNRVFVQDASSDEMTAD 195          
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: A0A6H5K060_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K060_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 2.660e-90
Identity = 147/269 (54.65%), Postives = 183/269 (68.03%), Query Frame = 1
Query:    1 QCWCGDNVGYAVNGDGDCDMPCSGNSDETCGGSYALSVYSNDED--YLGCWSDPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNED---YIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGDNADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNRVLVQDASSDEMTSD 792
            QCWCGDNV Y  NG+G CDM CSG+S ETCGG YA+SVY N +D  YLGC+SDP  A++R+F + +AT+DDMT+ +C  +C  + YYGTQY T+CWC D  A+YD NG   CDM C+G    E CGGF AMS+       Y N D   Y+GC+SDPA SRIFDL A+++DMTSE                   CWCGDNADYDANG    CDM C+G + ++CGG YAMSVYEN  V PVDPSY GCY+DP ++R+    A++D+MTS+
Sbjct:   30 QCWCGDNVDYDANGEGVCDMACSGDSSETCGGFYAMSVYENPDDSGYLGCYSDP--ADSRIFDL-VATADDMTSEICLGNCGAYQYYGTQYSTQCWCGD-NADYDANGAGECDMACSGDA-SEICGGFYAMSV-------YENPDDSGYLGCYSDPADSRIFDLVATADDMTSE-------------------CWCGDNADYDANGEGV-CDMACSGDASEICGGFYAMSVYENPDVDPVDPSYLGCYADPADSRIFDLVATADDMTSE 266          
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: A0A6H5KL84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL84_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 3.100e-67
Identity = 113/226 (50.00%), Postives = 148/226 (65.49%), Query Frame = 1
Query:  121 NDEDYLGCWSDPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQA-VCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNEDYIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGD-NADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNRVLVQDASSDEMTSD 792
            ND D LGC+ DP  A+ R+F +   +SDDMT AVC  HC+ + YYGTQY  ECWC D  A+YD NG +  C M CAG    E CGG  +MS+ Q+EV    +  Y GC+SDP  +R+F    SS++MT+E+C  QC+  A+YGTQYS ECWCGD NA Y  NG    CDMPC+G+S + CGGSY+M VY  D      P+Y GC+SDP + R+ V ++S+  MT++
Sbjct:   10 NDTDSLGCFYDP--ADNRIFWLA-TSSDDMTKAVCSDHCSAYPYYGTQYSVECWCGDENADYDANGASNECVMPCAGDA-SETCGGSYSMSVYQNEVEIPVDPAYRGCYSDPGTNRVFVQDDSSDEMTAEVCAAQCDESAFYGTQYSRECWCGDINAQYSVNGVGV-CDMPCSGNSEESCGGSYSMDVYAQD------PAYLGCFSDPADGRMFVWESSNTAMTAE 224          
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: A0A6H5KQV8_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV8_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 1.480e-65
Identity = 126/259 (48.65%), Postives = 156/259 (60.23%), Query Frame = 1
Query:    1 QCWCG-DNVGYAVNGDGDCDMPCSGNSDETCGGSYALSVYSNDED--------YLGCWSDPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNED--YIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCG-DNADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPG 741
            +CWCG +   Y  NG G CDMPC G++ ETCGG YA+S+Y +D D        YLGC+SDP  A++R+F  +I+ SD MT  VC   CA  AYYGTQY TE       + +  N  +  D    G    E CGGF AMSI +++     ++D  Y+GC+SDPA SR+F    SS  MT+E+C   C   AYYGTQYS ECWCG + ADYDANGA   CDMPC G + ++CGG YAMSVYEN     V P    C  D G
Sbjct:   24 RCWCGAEGADYDANGAGVCDMPCGGDAGETCGGFYAMSIYEHDVDGGESDDPSYLGCYSDP--ADSRVFEQKIS-SDSMTAEVCSEACAGSAYYGTQYSTE------VSGFRYNTPS--DNHEEGHD--EICGGFYAMSIYENDADDGESDDPSYLGCYSDPADSRVFVQGVSSAAMTAEICSAACAGSAYYGTQYSVECWCGAEGADYDANGAGV-CDMPCGGDADEICGGFYAMSVYENGADDGV-PDEFSCSGDAG 267          
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: A0A6H5KAS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS7_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 9.010e-53
Identity = 103/226 (45.58%), Postives = 135/226 (59.73%), Query Frame = 1
Query:  121 NDEDYLGCWSDPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQA-VCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNEDYIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGD-NADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNRVLVQDASSDEMTSD 792
            ND DYLGC+  P   + R+F +  ATSDDMT A                   CWC D  A+YD NG +  C M CAG    E CGG  +MS+ Q+EV    +  Y GC+SDP  +R+F    SS++MT+E+C  QC+  A+YGTQYS ECWCGD NA Y  NG    CDMPC+G+S + CGGSY+M VY  D      P+Y GC+SDP + R+ V ++S+  MT++
Sbjct:   10 NDTDYLGCYYIP--TDDRIFWLA-ATSDDMTKA-------------------CWCGDENADYDANGASNECVMPCAGDA-SETCGGSYSMSVYQNEVEIPVDPAYRGCYSDPGTNRVFVQDDSSDEMTAEVCAAQCDESAFYGTQYSRECWCGDINAQYSVNGVGV-CDMPCSGNSEESCGGSYSMDVYAQD------PAYLGCFSDPADGRMFVWESSNTAMTAE 205          
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: A0A6H5K646_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K646_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 8.620e-45
Identity = 87/172 (50.58%), Postives = 106/172 (61.63%), Query Frame = 1
Query:  235 CADHAYYGTQYGTECWCDDGTAEYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNED--YIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCG-DNADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPG 741
            C +  +Y   +  +CWC    A+YD NG  VCDM C G   GE CGGF AMSI +++     ++D  Y+GC+SDPA SR+F    SS  MT+E+C   C   AYYGTQYS ECWCG + ADYDANGA   CDMPC G + ++CGG YAMSVYEN     V P    C  D G
Sbjct:  269 CGNATHYCFAFYKQCWCGAEGADYDANGAGVCDMPCGGDA-GETCGGFYAMSIYENDADDGESDDPSYLGCYSDPADSRVFVQGVSSAAMTAEICSAACAGSAYYGTQYSVECWCGAEGADYDANGAGV-CDMPCGGDADEICGGFYAMSVYENGADDGV-PDEFSCSGDAG 437          
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 1.650e-43
Identity = 92/218 (42.20%), Postives = 113/218 (51.83%), Query Frame = 1
Query:  133 YLGCWSDPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQ-----------------------------------HEVVPYYNEDYIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGDNADYDANGATEECDMPCAGSSGQMCGGSYAMSVY 681
            YLGC+ D  T   R+FS+ +  S  MTTA+C   CAD+AYYGTQ+G ECWC +  A+YD  G+A CDM C G +  + CGGF+AMS                                        VVP     Y+GCF D    R+F +   S  MT+ +C   C  YAYYGTQ+  ECWCG+NA YD  G    CDM C G S + CGG  AMSVY
Sbjct:  583 YLGCFGDSQT--DRVFSV-VVFSGSMTTAICASTCADYAYYGTQFGGECWCGN-NADYDVYGEATCDMGCTGDS-SDICGGFNAMSFYSTGSVVETPSPVPDEVTXXXXXXXXXXXXXXXXXXXXXVVPT-EPGYLGCFGDSQADRVFSVVTGSGSMTTAICASTCADYAYYGTQFGGECWCGNNAAYDVYGEAT-CDMGCTGDSSEKCGGFNAMSVY 793          
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: A0A6H5KTL8_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL8_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 2.180e-42
Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 1
Query:  508 LCLDQCEAYAYYGTQYSTECWCGD-NADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNRVLVQDASSDEMTSD 792
            +C D C AY YYGTQYSTECWCGD NADY ANGA+ EC +PCAG + +MCGGSY+MSVY+N+V  PV P+YRGCYSDPG NRV VQD SSDEMT++
Sbjct:   95 VCSDHCSAYPYYGTQYSTECWCGDENADYGANGASNECVVPCAGDASEMCGGSYSMSVYQNEVEIPVHPAYRGCYSDPGTNRVFVQDDSSDEMTAE 190          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVT8_9PHAE7.380e-12064.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH79_ECTSI6.110e-11060.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4P0_ECTSI1.230e-10373.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K060_9PHAE2.660e-9054.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL84_9PHAE3.100e-6750.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQV8_9PHAE1.480e-6548.65WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KAS7_9PHAE9.010e-5345.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K646_9PHAE8.620e-4550.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G957_ECTSI1.650e-4342.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTL8_9PHAE2.180e-4271.88WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13036contigE-fasciculatus_F_contig13036:1080..3775 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score335.9
Seed ortholog evalue1.7e-89
Seed eggNOG ortholog2880.D7FH79
KEGG rclassRC00467
KEGG koko:K15920
KEGG ReactionR01433
KEGG Pathwayko00520,ko01100,map00520,map01100
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC3.2.1.37
COG Functional cat.U
CAZyGH3
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCarbohydrate-binding WSC
Ec32 orthologEc-22_001500.1
Exons5
Model size792
Cds size792
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13036.2300.1prot_E-fasciculatus_F_contig13036.2300.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13036 1080..3775 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927809.2403495-CDS-E-fasciculatus_F_contig13036:1079..12981622927809.2403495-CDS-E-fasciculatus_F_contig13036:1079..1298Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13036 1080..1298 +
1695995703.6123023-CDS-E-fasciculatus_F_contig13036:1079..12981695995703.6123023-CDS-E-fasciculatus_F_contig13036:1079..1298Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13036 1080..1298 +
1622927809.2502766-CDS-E-fasciculatus_F_contig13036:1845..19021622927809.2502766-CDS-E-fasciculatus_F_contig13036:1845..1902Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13036 1846..1902 +
1695995703.6229815-CDS-E-fasciculatus_F_contig13036:1845..19021695995703.6229815-CDS-E-fasciculatus_F_contig13036:1845..1902Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13036 1846..1902 +
1622927809.2590113-CDS-E-fasciculatus_F_contig13036:2449..26801622927809.2590113-CDS-E-fasciculatus_F_contig13036:2449..2680Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13036 2450..2680 +
1695995703.6340523-CDS-E-fasciculatus_F_contig13036:2449..26801695995703.6340523-CDS-E-fasciculatus_F_contig13036:2449..2680Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13036 2450..2680 +
1622927809.2700992-CDS-E-fasciculatus_F_contig13036:2988..30451622927809.2700992-CDS-E-fasciculatus_F_contig13036:2988..3045Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13036 2989..3045 +
1695995703.6429605-CDS-E-fasciculatus_F_contig13036:2988..30451695995703.6429605-CDS-E-fasciculatus_F_contig13036:2988..3045Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13036 2989..3045 +
1622927809.2850466-CDS-E-fasciculatus_F_contig13036:3547..37751622927809.2850466-CDS-E-fasciculatus_F_contig13036:3547..3775Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13036 3548..3775 +
1695995703.6517055-CDS-E-fasciculatus_F_contig13036:3547..37751695995703.6517055-CDS-E-fasciculatus_F_contig13036:3547..3775Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13036 3548..3775 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13036.2300.1

>prot_E-fasciculatus_F_contig13036.2300.1 ID=prot_E-fasciculatus_F_contig13036.2300.1|Name=mRNA_E-fasciculatus_F_contig13036.2300.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=264bp
QCWCGDNVGYAVNGDGDCDMPCSGNSDETCGGSYALSVYSNDEDYLGCWS
DPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTA
EYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNEDYIGCFSD
PAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGDNADYDAN
GATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNR
VLVQDASSDEMTSD
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mRNA from alignment at E-fasciculatus_F_contig13036:1080..3775+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13036.2300.1 ID=mRNA_E-fasciculatus_F_contig13036.2300.1|Name=mRNA_E-fasciculatus_F_contig13036.2300.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2696bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13036:1080..3775+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGTGCTGGTGCGGTGACAACGTCGGATACGCCGTCAACGGCGATGGCGA CTGCGACATGCCCTGCTCTGGTAACTCTGACGAGACCTGTGGCGGCTCGT ACGCGCTCTCCGTCTACTCGAACGACGAAGATTACCTGGGGTGCTGGAGC GATCCCTACACGGCGGAAACGCGGCTGTTTTCCATCCAGATCGCCACGTC GGACGACATGACTACTGCGGTGAGGCGCCACCGTCGCCAACTAGGAAATG CTCTCACACAAGCACGCCCAGTAGCTGGGTTCGGGGTTAAAGTTCTGTTT TGTCCTCACTCTCCGAGGCTATCGAGGTGTGGTGCATGGTGATGTCCATC CATGCTTGGGGCGTACAGAGTATTGGGGGGAATCAGAGGGTAAGCGAGAT TCTCAACCTCGCAATCACGTCCGATGGAAGCCCCCGAAATCCCGATGACG TTGGGTGCGGCGGTCGTTTACGGGGATAGAAGAACATTGGACGAGCTCCT TCTTTACGATCGGCCGAATGGAGTAGATCTCTTTCCAACCGCTAATATTG CATAGAGTGGGATGGTTTATCCAACGAACGGGGTTTGTCAAAACGCCTCC CTTCAACTCCAACGGCTACGTACGGTGCTCTATCTGTCACGACAACATCA CACCACAACACGAAACGTTTATGCGTCGACAACCTAGGTTTTCGAATTGA CCGGTTCGCCACGGCTGATGGATATGTATTCGCCACTTGGCGCGGTTGCT TTCCGTGTTATTACAGGTCTGCGAAGTCCATTGCGCCGATCATGCGTACT ACGGGACCCAGTATGGAACGGAGGTGAGTTGCGTTTAGCTAGTTTAGTCA AAATCTTTCGATCGGGTTGTATTCTCCCATTCTCCGTCGAAAAATGCGTG AGCGAGAGGCCGATGATTTGCCGCGAGCGACGATTTCGCCGTTAATGTCA GGAGCCTTTCCAGTCGTCGTGAGAACTGCCTGTTTGAGTAAGAATGGGGC TTCCCTTGTTCATTACGCTTGGTTTTTGAAGGCAATCTCCTCTGTAGCGC TTACACCACGAGGAATCGACGTGCTCACCGACCGACAAGTCATCGCTTCA TCATTGGATCCCAAGTTCGCACTGACTGGAGTAAGTGAGATACCGAAACA GACGCATGGCAGAACTGTTTTGCTCAAGCGGCGTACGTGCATAAAGACCC TGACACGATCCGGGTGCGCTGGGCATCACGACGGTTTCCCTGTGACTCTG TGGCAAAGGGATGCCGCGGTTTTGGCATACTGGGGCAGTCTATCAAACTC GTCCCTTTGTGAAAAGCAAATGCTCTTTGCCCGGTCTGCCTGTGCTCCTG TGTTCATGTTCGAAACACAGTGCTGGTGCGATGATGGCACGGCCGAGTAC GACCAGAACGGTCAGGCCGTGTGCGACATGGAGTGCGCTGGATCCACCGA CGGCGAGTTCTGCGGCGGATTTGACGCTATGTCCATTCGCCAACACGAAG TAGTGCCATACTATAACGAAGACTACATTGGGTGTTTCTCCGACCCGGCT GGCAGCCGCATTTTCGATCTGGCGGCTTCCTCTAACGACATGACCTCGGA GGTGAGTAAGCAATCGAATCCCGGTTGGTTTGGTCTGTTTGTTTGGGCTG AGCTACTTACGGCTTTTTGTCGATGACTCCAGGCTTGTACTGTGCGTGGT ACCGATGCTGGTCCGTGGCTTTGCTGTCGCACAGCCGGGACACGAACATT CGGAATCATCAATTGAACCACATGCACGAGCATTCGGAATCATCATTGGA ACTACATACCACCGCCACCTCCCGCACAAATCCACGTCGGCATCTGTTCG CTTGTCTCCCTTCCTTCGACCGACCACTTACTTCCCGTCCCGCTGCCCAA CGACCACAGCTCTGCTTGGATCAGTGCGAAGCGTATGCTTACTACGGAAC TCAGTATTCGACAGAGGTGAGAGTCCTGTAGCACACACTCGAACAGAGGT GCTTGGGATCTTCCGTCGCAACATTACTCCAGCATGGCGTTGGAGAAACA TCATGCATGTCGGTGTGGGCGTTCCACATTCTCGGCCACTGCCTTGTTTT CGTGGCTCTACGCACCACCGGAGTTCTATACACCATCGCGGAATGTGATG GATTGGCGGTTCCTTGGAGAAATGAACAATGCTGCGTGTTCGGTCGATAG CATTAGGCTGTCGGCCGGATATTCGCTAATGCTTCAGGAGATCGCCTGAA CTCATTGAGGGCTGCTTCTTTGCAGGGAAGATTGTCCTGTGTCAGGTTTT GCTGATACACGTTGACAACCGTGGCCTCACGTCACACGCAGCCACCAGTC CAAGCCGTACGGCGTGCAAACTAAGGGTGGTGTATGCCACAACGTGGCGA TAAAACCCTCGCCCTCCCGTTCACTGCACTCCCCTTCTTCCCGTTCTGGA TACTCTCGAACGCCACAGTGCTGGTGCGGTGACAACGCCGACTATGATGC GAACGGTGCCACCGAGGAGTGCGACATGCCCTGCGCGGGCTCATCCGGCC AGATGTGTGGGGGCTCATATGCTATGAGTGTCTACGAGAACGACGTCGTC CCCCCTGTGGACCCCTCCTACCGTGGCTGCTACTCCGACCCAGGCAACAA CCGTGTTTTAGTGCAGGACGCTTCCTCTGACGAGATGACCTCAGAC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13036:1080..3775+

>mRNA_E-fasciculatus_F_contig13036.2300.1 ID=mRNA_E-fasciculatus_F_contig13036.2300.1|Name=mRNA_E-fasciculatus_F_contig13036.2300.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1584bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13036:1080..3775+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGTGCTGGTGCGGTGACAACGTCGGATACGCCGTCAACGGCGATGGCGA
CTGCGACATGCCCTGCTCTGGTAACTCTGACGAGACCTGTGGCGGCTCGT
ACGCGCTCTCCGTCTACTCGAACGACGAAGATTACCTGGGGTGCTGGAGC
GATCCCTACACGGCGGAAACGCGGCTGTTTTCCATCCAGATCGCCACGTC
GGACGACATGACTACTGCGCAGTGCTGGTGCGGTGACAACGTCGGATACG
CCGTCAACGGCGATGGCGACTGCGACATGCCCTGCTCTGGTAACTCTGAC
GAGACCTGTGGCGGCTCGTACGCGCTCTCCGTCTACTCGAACGACGAAGA
TTACCTGGGGTGCTGGAGCGATCCCTACACGGCGGAAACGCGGCTGTTTT
CCATCCAGATCGCCACGTCGGACGACATGACTACTGCGGTCTGCGAAGTC
CATTGCGCCGATCATGCGTACTACGGGACCCAGTATGGAACGGAGGTCTG
CGAAGTCCATTGCGCCGATCATGCGTACTACGGGACCCAGTATGGAACGG
AGTGCTGGTGCGATGATGGCACGGCCGAGTACGACCAGAACGGTCAGGCC
GTGTGCGACATGGAGTGCGCTGGATCCACCGACGGCGAGTTCTGCGGCGG
ATTTGACGCTATGTCCATTCGCCAACACGAAGTAGTGCCATACTATAACG
AAGACTACATTGGGTGTTTCTCCGACCCGGCTGGCAGCCGCATTTTCGAT
CTGGCGGCTTCCTCTAACGACATGACCTCGGAGTGCTGGTGCGATGATGG
CACGGCCGAGTACGACCAGAACGGTCAGGCCGTGTGCGACATGGAGTGCG
CTGGATCCACCGACGGCGAGTTCTGCGGCGGATTTGACGCTATGTCCATT
CGCCAACACGAAGTAGTGCCATACTATAACGAAGACTACATTGGGTGTTT
CTCCGACCCGGCTGGCAGCCGCATTTTCGATCTGGCGGCTTCCTCTAACG
ACATGACCTCGGAGCTCTGCTTGGATCAGTGCGAAGCGTATGCTTACTAC
GGAACTCAGTATTCGACAGAGCTCTGCTTGGATCAGTGCGAAGCGTATGC
TTACTACGGAACTCAGTATTCGACAGAGTGCTGGTGCGGTGACAACGCCG
ACTATGATGCGAACGGTGCCACCGAGGAGTGCGACATGCCCTGCGCGGGC
TCATCCGGCCAGATGTGTGGGGGCTCATATGCTATGAGTGTCTACGAGAA
CGACGTCGTCCCCCCTGTGGACCCCTCCTACCGTGGCTGCTACTCCGACC
CAGGCAACAACCGTGTTTTAGTGCAGGACGCTTCCTCTGACGAGATGACC
TCAGACTGCTGGTGCGGTGACAACGCCGACTATGATGCGAACGGTGCCAC
CGAGGAGTGCGACATGCCCTGCGCGGGCTCATCCGGCCAGATGTGTGGGG
GCTCATATGCTATGAGTGTCTACGAGAACGACGTCGTCCCCCCTGTGGAC
CCCTCCTACCGTGGCTGCTACTCCGACCCAGGCAACAACCGTGTTTTAGT
GCAGGACGCTTCCTCTGACGAGATGACCTCAGAC
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