mRNA_E-fasciculatus_F_contig13036.2300.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: A0A6H5JVT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT8_9PHAE) HSP 1 Score: 356 bits (913), Expect = 7.380e-120 Identity = 172/265 (64.91%), Postives = 201/265 (75.85%), Query Frame = 1
Query: 1 QCWCGDNVGYAVNGDGDCDMPCSGNSDETCGGSYALSVYSNDEDYLGCWSDPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQHE-VVPYYNEDYIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGDNADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNRVLVQDASSDEMTSD 792
+CWCGDNVGYA NG G CDMPC+GN+DE CGG YALS+YSND +YLGCWSDPYTAETRLFS +I SDDMTTAVC+ CA + YGTQYGTECWCDDGT++YDQNG AVCD ECAGSTDGEFCGGFDA+SIR H+ +V N Y+GCFSDPA +RIF L ASS+DMT+E CWCG+NA+YD NG CDM C+G S ++CGGSYAMSVYEND V VDPSYRGC++D +NRV Q S ++T++
Sbjct: 10 RCWCGDNVGYAENGPGVCDMPCTGNTDEVCGGQYALSIYSNDPNYLGCWSDPYTAETRLFSTRIDVSDDMTTAVCDDLCAIYPLYGTQYGTECWCDDGTSDYDQNGPAVCDYECAGSTDGEFCGGFDAISIRSHDAIVIGNNSSYVGCFSDPADNRIFALGASSDDMTAE-------------------CWCGNNAEYDVNGVGV-CDMACSGDSREVCGGSYAMSVYENDNVE-VDPSYRGCFADTADNRVFHQTTSDFDLTTE 253
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: D7FH79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH79_ECTSI) HSP 1 Score: 333 bits (853), Expect = 6.110e-110 Identity = 162/266 (60.90%), Postives = 201/266 (75.56%), Query Frame = 1
Query: 1 QCWCGDNVGYAVNGDGDCDMPCSGNSDETCGGSYALSVYSNDED--YLGCWSDPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNEDYIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGDNADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNRVLVQDASSDEMTSD 792
+CWCGDNV Y NG+G CDM CSG+S +TCGG YA+SVY N +D YLGC+SDP A++R+F + +ATSDDMT+ +C +C + YYGTQY T+CWC D A+YD NG CDM C+G E CGGF MS+ +E V + Y+GC+SDPA SRIF+L A+S+DMTSE+CL C AY YYGTQYST+CWCGDNADYDANGA E CDM C+G S ++CGG Y+MSVYENDV PVD SYRGCYSDP ++R+ V+ SSD MT++
Sbjct: 60 ECWCGDNVDYDANGEGVCDMACSGDSSQTCGGFYAMSVYENPDDSGYLGCYSDP--ADSRIFEL-VATSDDMTSEICLGNCGAYQYYGTQYSTQCWCGD-NADYDANGAGECDMACSGDA-SEICGGFYTMSV--YENVDPVDPSYLGCYSDPADSRIFELVATSDDMTSEICLGNCGAYQYYGTQYSTQCWCGDNADYDANGAGE-CDMDCSGDSSEICGGFYSMSVYENDV-DPVDLSYRGCYSDPADSRIFVEAGSSDGMTAE 316
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: D7G4P0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P0_ECTSI) HSP 1 Score: 310 bits (794), Expect = 1.230e-103 Identity = 145/196 (73.98%), Postives = 164/196 (83.67%), Query Frame = 1
Query: 208 MTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNEDYIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGDNAD-YDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNRVLVQDASSDEMTSD 792
MTTAVCE CA++AYYGTQYGTECWCD+GTA+Y QNG AVCD ECAGSTDGEFCGGFDAMSIRQHEV ++Y+GCFSDPA +RIF+L SS+DMT E+C C AY YYGTQYSTECWCGD YD NGA+EEC MPCAG + ++CGG Y+MSVY+NDV PVDP+YRGCYSDPG NRV VQDASSDEMT+D
Sbjct: 1 MTTAVCEGLCANYAYYGTQYGTECWCDEGTADYAQNGLAVCDYECAGSTDGEFCGGFDAMSIRQHEVDTN-PDNYLGCFSDPADNRIFELVTSSDDMTEEVCSGHCSAYPYYGTQYSTECWCGDGETAYDTNGASEECVMPCAGDASEICGGPYSMSVYQNDVEIPVDPAYRGCYSDPGTNRVFVQDASSDEMTAD 195
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: A0A6H5K060_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K060_9PHAE) HSP 1 Score: 285 bits (729), Expect = 2.660e-90 Identity = 147/269 (54.65%), Postives = 183/269 (68.03%), Query Frame = 1
Query: 1 QCWCGDNVGYAVNGDGDCDMPCSGNSDETCGGSYALSVYSNDED--YLGCWSDPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNED---YIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGDNADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNRVLVQDASSDEMTSD 792
QCWCGDNV Y NG+G CDM CSG+S ETCGG YA+SVY N +D YLGC+SDP A++R+F + +AT+DDMT+ +C +C + YYGTQY T+CWC D A+YD NG CDM C+G E CGGF AMS+ Y N D Y+GC+SDPA SRIFDL A+++DMTSE CWCGDNADYDANG CDM C+G + ++CGG YAMSVYEN V PVDPSY GCY+DP ++R+ A++D+MTS+
Sbjct: 30 QCWCGDNVDYDANGEGVCDMACSGDSSETCGGFYAMSVYENPDDSGYLGCYSDP--ADSRIFDL-VATADDMTSEICLGNCGAYQYYGTQYSTQCWCGD-NADYDANGAGECDMACSGDA-SEICGGFYAMSV-------YENPDDSGYLGCYSDPADSRIFDLVATADDMTSE-------------------CWCGDNADYDANGEGV-CDMACSGDASEICGGFYAMSVYENPDVDPVDPSYLGCYADPADSRIFDLVATADDMTSE 266
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: A0A6H5KL84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL84_9PHAE) HSP 1 Score: 217 bits (552), Expect = 3.100e-67 Identity = 113/226 (50.00%), Postives = 148/226 (65.49%), Query Frame = 1
Query: 121 NDEDYLGCWSDPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQA-VCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNEDYIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGD-NADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNRVLVQDASSDEMTSD 792
ND D LGC+ DP A+ R+F + +SDDMT AVC HC+ + YYGTQY ECWC D A+YD NG + C M CAG E CGG +MS+ Q+EV + Y GC+SDP +R+F SS++MT+E+C QC+ A+YGTQYS ECWCGD NA Y NG CDMPC+G+S + CGGSY+M VY D P+Y GC+SDP + R+ V ++S+ MT++
Sbjct: 10 NDTDSLGCFYDP--ADNRIFWLA-TSSDDMTKAVCSDHCSAYPYYGTQYSVECWCGDENADYDANGASNECVMPCAGDA-SETCGGSYSMSVYQNEVEIPVDPAYRGCYSDPGTNRVFVQDDSSDEMTAEVCAAQCDESAFYGTQYSRECWCGDINAQYSVNGVGV-CDMPCSGNSEESCGGSYSMDVYAQD------PAYLGCFSDPADGRMFVWESSNTAMTAE 224
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: A0A6H5KQV8_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV8_9PHAE) HSP 1 Score: 216 bits (549), Expect = 1.480e-65 Identity = 126/259 (48.65%), Postives = 156/259 (60.23%), Query Frame = 1
Query: 1 QCWCG-DNVGYAVNGDGDCDMPCSGNSDETCGGSYALSVYSNDED--------YLGCWSDPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNED--YIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCG-DNADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPG 741
+CWCG + Y NG G CDMPC G++ ETCGG YA+S+Y +D D YLGC+SDP A++R+F +I+ SD MT VC CA AYYGTQY TE + + N + D G E CGGF AMSI +++ ++D Y+GC+SDPA SR+F SS MT+E+C C AYYGTQYS ECWCG + ADYDANGA CDMPC G + ++CGG YAMSVYEN V P C D G
Sbjct: 24 RCWCGAEGADYDANGAGVCDMPCGGDAGETCGGFYAMSIYEHDVDGGESDDPSYLGCYSDP--ADSRVFEQKIS-SDSMTAEVCSEACAGSAYYGTQYSTE------VSGFRYNTPS--DNHEEGHD--EICGGFYAMSIYENDADDGESDDPSYLGCYSDPADSRVFVQGVSSAAMTAEICSAACAGSAYYGTQYSVECWCGAEGADYDANGAGV-CDMPCGGDADEICGGFYAMSVYENGADDGV-PDEFSCSGDAG 267
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: A0A6H5KAS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS7_9PHAE) HSP 1 Score: 181 bits (460), Expect = 9.010e-53 Identity = 103/226 (45.58%), Postives = 135/226 (59.73%), Query Frame = 1
Query: 121 NDEDYLGCWSDPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQA-VCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNEDYIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGD-NADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNRVLVQDASSDEMTSD 792
ND DYLGC+ P + R+F + ATSDDMT A CWC D A+YD NG + C M CAG E CGG +MS+ Q+EV + Y GC+SDP +R+F SS++MT+E+C QC+ A+YGTQYS ECWCGD NA Y NG CDMPC+G+S + CGGSY+M VY D P+Y GC+SDP + R+ V ++S+ MT++
Sbjct: 10 NDTDYLGCYYIP--TDDRIFWLA-ATSDDMTKA-------------------CWCGDENADYDANGASNECVMPCAGDA-SETCGGSYSMSVYQNEVEIPVDPAYRGCYSDPGTNRVFVQDDSSDEMTAEVCAAQCDESAFYGTQYSRECWCGDINAQYSVNGVGV-CDMPCSGNSEESCGGSYSMDVYAQD------PAYLGCFSDPADGRMFVWESSNTAMTAE 205
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: A0A6H5K646_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K646_9PHAE) HSP 1 Score: 166 bits (421), Expect = 8.620e-45 Identity = 87/172 (50.58%), Postives = 106/172 (61.63%), Query Frame = 1
Query: 235 CADHAYYGTQYGTECWCDDGTAEYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQHEVVPYYNED--YIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCG-DNADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPG 741
C + +Y + +CWC A+YD NG VCDM C G GE CGGF AMSI +++ ++D Y+GC+SDPA SR+F SS MT+E+C C AYYGTQYS ECWCG + ADYDANGA CDMPC G + ++CGG YAMSVYEN V P C D G
Sbjct: 269 CGNATHYCFAFYKQCWCGAEGADYDANGAGVCDMPCGGDA-GETCGGFYAMSIYENDADDGESDDPSYLGCYSDPADSRVFVQGVSSAAMTAEICSAACAGSAYYGTQYSVECWCGAEGADYDANGAGV-CDMPCGGDADEICGGFYAMSVYENGADDGV-PDEFSCSGDAG 437
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI) HSP 1 Score: 167 bits (422), Expect = 1.650e-43 Identity = 92/218 (42.20%), Postives = 113/218 (51.83%), Query Frame = 1
Query: 133 YLGCWSDPYTAETRLFSIQIATSDDMTTAVCEVHCADHAYYGTQYGTECWCDDGTAEYDQNGQAVCDMECAGSTDGEFCGGFDAMSIRQ-----------------------------------HEVVPYYNEDYIGCFSDPAGSRIFDLAASSNDMTSELCLDQCEAYAYYGTQYSTECWCGDNADYDANGATEECDMPCAGSSGQMCGGSYAMSVY 681
YLGC+ D T R+FS+ + S MTTA+C CAD+AYYGTQ+G ECWC + A+YD G+A CDM C G + + CGGF+AMS VVP Y+GCF D R+F + S MT+ +C C YAYYGTQ+ ECWCG+NA YD G CDM C G S + CGG AMSVY
Sbjct: 583 YLGCFGDSQT--DRVFSV-VVFSGSMTTAICASTCADYAYYGTQFGGECWCGN-NADYDVYGEATCDMGCTGDS-SDICGGFNAMSFYSTGSVVETPSPVPDEVTXXXXXXXXXXXXXXXXXXXXXVVPT-EPGYLGCFGDSQADRVFSVVTGSGSMTTAICASTCADYAYYGTQFGGECWCGNNAAYDVYGEAT-CDMGCTGDSSEKCGGFNAMSVY 793
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Match: A0A6H5KTL8_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL8_9PHAE) HSP 1 Score: 153 bits (386), Expect = 2.180e-42 Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 1
Query: 508 LCLDQCEAYAYYGTQYSTECWCGD-NADYDANGATEECDMPCAGSSGQMCGGSYAMSVYENDVVPPVDPSYRGCYSDPGNNRVLVQDASSDEMTSD 792
+C D C AY YYGTQYSTECWCGD NADY ANGA+ EC +PCAG + +MCGGSY+MSVY+N+V PV P+YRGCYSDPG NRV VQD SSDEMT++
Sbjct: 95 VCSDHCSAYPYYGTQYSTECWCGDENADYGANGASNECVVPCAGDASEMCGGSYSMSVYQNEVEIPVHPAYRGCYSDPGTNRVFVQDDSSDEMTAE 190 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13036.2300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13036.2300.1 >prot_E-fasciculatus_F_contig13036.2300.1 ID=prot_E-fasciculatus_F_contig13036.2300.1|Name=mRNA_E-fasciculatus_F_contig13036.2300.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=264bp QCWCGDNVGYAVNGDGDCDMPCSGNSDETCGGSYALSVYSNDEDYLGCWSback to top mRNA from alignment at E-fasciculatus_F_contig13036:1080..3775+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13036.2300.1 ID=mRNA_E-fasciculatus_F_contig13036.2300.1|Name=mRNA_E-fasciculatus_F_contig13036.2300.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2696bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13036:1080..3775+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13036:1080..3775+ >mRNA_E-fasciculatus_F_contig13036.2300.1 ID=mRNA_E-fasciculatus_F_contig13036.2300.1|Name=mRNA_E-fasciculatus_F_contig13036.2300.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1584bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13036:1080..3775+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |