prot_E-fasciculatus_F_contig13024.2292.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13024.2292.1
Unique Nameprot_E-fasciculatus_F_contig13024.2292.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length244
Homology
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A6H5KFM7_9PHAE (RING-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFM7_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 2.170e-129
Identity = 187/198 (94.44%), Postives = 190/198 (95.96%), Query Frame = 0
Query:   47 GVKAEPALGAAALERVMAAAKAAHEDQQRCAEDQRAVCDLCNVRRADLRGPCGHKYHARCIYSMPITRCPVCDADFGNDDGLFILPVEPYSATTLFEDDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPMGEEHIAKHREAQKRLSDLEEV 244
            GVKAEPALGA ALERVMAAAKAAHE+QQRCAEDQRAVCDLCNVRRADLRGPCGHKYHARCIYSMPI RCPVCD DFGNDDGLFILPVEPYSAT  FE+DERKG D EHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCP RPMGEEHIAKHREAQKRLSDLEE+
Sbjct:   43 GVKAEPALGAVALERVMAAAKAAHEEQQRCAEDQRAVCDLCNVRRADLRGPCGHKYHARCIYSMPIVRCPVCDMDFGNDDGLFILPVEPYSATNFFEEDERKGGDREHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEM 240          
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: D8LER0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER0_ECTSI)

HSP 1 Score: 392 bits (1008), Expect = 3.740e-129
Identity = 199/240 (82.92%), Postives = 203/240 (84.58%), Query Frame = 0
Query:    5 HVTGMNVGQARGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVKAEPALGAAALERVMAAAKAAHEDQQRCAEDQRAVCDLCNVRRADLRGPCGHKYHARCIYSMPITRCPVCDADFGNDDGLFILPVEPYSATTLFEDDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPMGEEHIAKHREAQKRLSDLEEV 244
            H TGMNVGQA  G                            SGVKAEPALGAAALE+VMAAAK A E+QQRCAEDQRAVCDLCNVRRADLRGPCGHKYHARCIYSMPI RCPVCD DFGNDDGLFILPVEPYSAT LFE+DERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCP RPMGEEHIAKHREAQKRLSDLEE+
Sbjct:    9 HGTGMNVGQATAGAGGSIAAGDGGIGEHSSSSS--------SGVKAEPALGAAALEKVMAAAKVAQEEQQRCAEDQRAVCDLCNVRRADLRGPCGHKYHARCIYSMPIVRCPVCDMDFGNDDGLFILPVEPYSATNLFEEDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEM 240          
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: D8LLI7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLI7_ECTSI)

HSP 1 Score: 261 bits (667), Expect = 3.090e-83
Identity = 133/171 (77.78%), Postives = 143/171 (83.63%), Query Frame = 0
Query:   82 AVCDLCNVRRADLRGPCGHKYHARCIYSMPITRCPVCDADFGN--DDGLFILPVEPYS----ATTLFEDDERKG--RDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPMGEEHIAKHREAQKRLSDLEEV 244
            +VCDLCN+RRADLRGPCGHKYHARCIY+MPITRCPVCD  F N  D GL ILPVEP+S    AT   EDD R G    AE Q+RTGRWHS+ETMYAQRIVADFDAGT+PL EGTKLGN LCNILNCSPSRLSKKLKIGKK FQ+  DRPM  EHIA+HREAQKRLSDLEE+
Sbjct:   33 SVCDLCNMRRADLRGPCGHKYHARCIYAMPITRCPVCDQAFPNTNDGGLLILPVEPFSDAGGATGESEDDSRTGAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEM 203          
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A836CDJ8_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ8_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.280e-55
Identity = 86/166 (51.81%), Postives = 116/166 (69.88%), Query Frame = 0
Query:   79 DQRAVCDLCNVRRADLRGPCGHKYHARCIYSMPITRCPVCDADFGNDDGLFILPVEPYSATTLFEDDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPMGEEHIAKHREAQKRLSDLEEV 244
            ++R VCDLC++RRAD+R PCGH  HARCIY +P++ CPVC AD    +GL +LPVEP++             +A+ + RTGRWH YET YAQ ++ DF+AGT+P+ EGTKL   LC +LNC+ +RLSKKLKIGK+++   P R    E IA H   Q+R+S+LEE+
Sbjct:   13 EERVVCDLCSIRRADVRTPCGHALHARCIYQLPLSECPVCRADMTQSEGLQVLPVEPHN--------NEPAENADTELRTGRWHHYETQYAQHLMEDFEAGTLPIGEGTKLATLLCRLLNCNQTRLSKKLKIGKRFYAHGPTRIRTPEAIAAHSVRQRRISELEEM 170          
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A835ZCD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD8_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.200e-25
Identity = 52/88 (59.09%), Postives = 69/88 (78.41%), Query Frame = 0
Query:  157 RTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPMGEEHIAKHREAQKRLSDLEEV 244
            RTGRWHSYET+YAQ ++ DF+AGT+P+ EGTKL + LC +LNC+ +RLSKKLKIGK+++   P R    E IA HR  Q+R+S+LEE+
Sbjct:   68 RTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEM 155          
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A662WLN8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLN8_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 6.320e-13
Identity = 47/136 (34.56%), Postives = 66/136 (48.53%), Query Frame = 0
Query:   84 CDLCNVRRADLR-GPCGHKYHARCIYSMPITRCPVCDADFGNDDGLFILPVEPYSATTLFEDDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK---IGKKYF 215
            CD C    A L    CGH++H RCI+S P TRC +C A           PV        F++ +  G       R G+W + E  YA  ++  F  G +PL++G  L  F+ N+L C P R++KK     IGK+ F
Sbjct:   19 CDGCKSCGAILELDGCGHRFHPRCIFSWPATRCELCAA-----------PVTTLRVFREFKNLQNSG------VRKGKWSADEHKYANMMMKQFQLGALPLADGLHLRGFIANLLQCDPLRVTKKYAGQAIGKQNF 137          
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A836CP88_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP88_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.200e-9
Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 0
Query:  157 RTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQR 217
            R G+W   E  YA+R++A+F AG +PL++GT L  FL  +LNC P R+SKK      IGK+ F+R
Sbjct:    5 RRGKWTQEEDAYARRLIAEFKAGLLPLTDGTTLRTFLSIMLNCDPMRISKKFTGAHCIGKQVFRR 69          
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A1Z5JMG8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMG8_FISSO)

HSP 1 Score: 68.6 bits (166), Expect = 1.290e-9
Identity = 46/156 (29.49%), Postives = 73/156 (46.79%), Query Frame = 0
Query:   79 DQRAVCDLCNVRRADLRG-PCGHKYHARCIY---SMPITRCPVCDADFGNDDGLFILPV------EPYSATTLFEDDERKGRDAEH------------QSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGK 212
            D+   C  C     D+R   CG   HARC+    + P+T C +C       +GL++ P+      E     +   D + +GR  +             + RTGRW + E  Y  +++  F+ G +P+ +G+KL  FL N+L    SRL+KK+K  K
Sbjct:   27 DEYVSCSRCGHGGCDIRVFGCGCTVHARCMALNPNGPLTTCTLCHKP---TNGLYLFPMSFREIDEAAKIASSLLDAKGRGRKRKGAPEDEFPGAYLTERRTGRWTTDEMAYCDKLIEKFEKGEVPIEDGSKLNEFLGNMLKSKQSRLTKKMKNAK 179          
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A7S4J6Z5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J6Z5_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.030e-8
Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 0
Query:  157 RTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQR 217
            R G+W   E  YA R++ +F AG +PL++GT L  FL  +LNC P R+SKK      IGK+ F+R
Sbjct:   40 RRGKWTPEEESYANRLILEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRR 104          
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A7S2NX07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NX07_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 3.650e-8
Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 0
Query:  157 RTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQR 217
            R G+W   E  YA R++ +F AG +PL++GT L  FL  +LNC P R+SKK      IGK+ F+R
Sbjct:  162 RRGKWTPEEEAYANRLILEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRR 226          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFM7_9PHAE2.170e-12994.44RING-type domain-containing protein (Fragment) n=1... [more]
D8LER0_ECTSI3.740e-12982.92RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LLI7_ECTSI3.090e-8377.78RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CDJ8_9STRA1.280e-5551.81RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835ZCD8_9STRA2.200e-2559.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A662WLN8_9STRA6.320e-1334.56Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A836CP88_9STRA1.200e-947.69Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A1Z5JMG8_FISSO1.290e-929.49Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S4J6Z5_9STRA2.030e-846.15Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2NX07_9STRA3.650e-846.15Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 57..129
e-value: 3.8E-6
score: 28.2
NoneNo IPR availablePANTHERPTHR35213FAMILY NOT NAMEDcoord: 156..212
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 80..125
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 84..119
score: 9.981

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13024contigE-fasciculatus_F_contig13024:374..2634 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13024.2292.1mRNA_E-fasciculatus_F_contig13024.2292.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13024 374..2634 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13024.2292.1 ID=prot_E-fasciculatus_F_contig13024.2292.1|Name=mRNA_E-fasciculatus_F_contig13024.2292.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=244bp
MLPQHVTGMNVGQARGGGGGAPAGGGGGGRGGGGGAGAGEHSSSSSGVKA
EPALGAAALERVMAAAKAAHEDQQRCAEDQRAVCDLCNVRRADLRGPCGH
KYHARCIYSMPITRCPVCDADFGNDDGLFILPVEPYSATTLFEDDERKGR
DAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCS
PSRLSKKLKIGKKYFQRCPDRPMGEEHIAKHREAQKRLSDLEEV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD