mRNA_E-fasciculatus_F_contig13024.2292.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A6H5KFM7_9PHAE (RING-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFM7_9PHAE) HSP 1 Score: 386 bits (991), Expect = 2.170e-129 Identity = 187/198 (94.44%), Postives = 190/198 (95.96%), Query Frame = 1
Query: 139 GVKAEPALGAAALERVMAAAKAAHEDQQRCAEDQRAVCDLCNVRRADLRGPCGHKYHARCIYSMPITRCPVCDADFGNDDGLFILPVEPYSATTLFEDDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPMGEEHIAKHREAQKRLSDLEEV 732
GVKAEPALGA ALERVMAAAKAAHE+QQRCAEDQRAVCDLCNVRRADLRGPCGHKYHARCIYSMPI RCPVCD DFGNDDGLFILPVEPYSAT FE+DERKG D EHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCP RPMGEEHIAKHREAQKRLSDLEE+
Sbjct: 43 GVKAEPALGAVALERVMAAAKAAHEEQQRCAEDQRAVCDLCNVRRADLRGPCGHKYHARCIYSMPIVRCPVCDMDFGNDDGLFILPVEPYSATNFFEEDERKGGDREHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEM 240
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: D8LER0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER0_ECTSI) HSP 1 Score: 392 bits (1008), Expect = 3.740e-129 Identity = 199/240 (82.92%), Postives = 203/240 (84.58%), Query Frame = 1
Query: 13 HVTGMNVGQARGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVKAEPALGAAALERVMAAAKAAHEDQQRCAEDQRAVCDLCNVRRADLRGPCGHKYHARCIYSMPITRCPVCDADFGNDDGLFILPVEPYSATTLFEDDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPMGEEHIAKHREAQKRLSDLEEV 732
H TGMNVGQA G SGVKAEPALGAAALE+VMAAAK A E+QQRCAEDQRAVCDLCNVRRADLRGPCGHKYHARCIYSMPI RCPVCD DFGNDDGLFILPVEPYSAT LFE+DERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCP RPMGEEHIAKHREAQKRLSDLEE+
Sbjct: 9 HGTGMNVGQATAGAGGSIAAGDGGIGEHSSSSS--------SGVKAEPALGAAALEKVMAAAKVAQEEQQRCAEDQRAVCDLCNVRRADLRGPCGHKYHARCIYSMPIVRCPVCDMDFGNDDGLFILPVEPYSATNLFEEDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEM 240
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: D8LLI7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLI7_ECTSI) HSP 1 Score: 261 bits (667), Expect = 3.090e-83 Identity = 133/171 (77.78%), Postives = 143/171 (83.63%), Query Frame = 1
Query: 244 AVCDLCNVRRADLRGPCGHKYHARCIYSMPITRCPVCDADFGN--DDGLFILPVEPYS----ATTLFEDDERKG--RDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPMGEEHIAKHREAQKRLSDLEEV 732
+VCDLCN+RRADLRGPCGHKYHARCIY+MPITRCPVCD F N D GL ILPVEP+S AT EDD R G AE Q+RTGRWHS+ETMYAQRIVADFDAGT+PL EGTKLGN LCNILNCSPSRLSKKLKIGKK FQ+ DRPM EHIA+HREAQKRLSDLEE+
Sbjct: 33 SVCDLCNMRRADLRGPCGHKYHARCIYAMPITRCPVCDQAFPNTNDGGLLILPVEPFSDAGGATGESEDDSRTGAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEM 203
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A836CDJ8_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ8_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.280e-55 Identity = 86/166 (51.81%), Postives = 116/166 (69.88%), Query Frame = 1
Query: 235 DQRAVCDLCNVRRADLRGPCGHKYHARCIYSMPITRCPVCDADFGNDDGLFILPVEPYSATTLFEDDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPMGEEHIAKHREAQKRLSDLEEV 732
++R VCDLC++RRAD+R PCGH HARCIY +P++ CPVC AD +GL +LPVEP++ +A+ + RTGRWH YET YAQ ++ DF+AGT+P+ EGTKL LC +LNC+ +RLSKKLKIGK+++ P R E IA H Q+R+S+LEE+
Sbjct: 13 EERVVCDLCSIRRADVRTPCGHALHARCIYQLPLSECPVCRADMTQSEGLQVLPVEPHN--------NEPAENADTELRTGRWHHYETQYAQHLMEDFEAGTLPIGEGTKLATLLCRLLNCNQTRLSKKLKIGKRFYAHGPTRIRTPEAIAAHSVRQRRISELEEM 170
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A835ZCD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD8_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.200e-25 Identity = 52/88 (59.09%), Postives = 69/88 (78.41%), Query Frame = 1
Query: 469 RTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPDRPMGEEHIAKHREAQKRLSDLEEV 732
RTGRWHSYET+YAQ ++ DF+AGT+P+ EGTKL + LC +LNC+ +RLSKKLKIGK+++ P R E IA HR Q+R+S+LEE+
Sbjct: 68 RTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEM 155
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A662WLN8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLN8_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 6.320e-13 Identity = 47/136 (34.56%), Postives = 66/136 (48.53%), Query Frame = 1
Query: 250 CDLCNVRRADLR-GPCGHKYHARCIYSMPITRCPVCDADFGNDDGLFILPVEPYSATTLFEDDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK---IGKKYF 645
CD C A L CGH++H RCI+S P TRC +C A PV F++ + G R G+W + E YA ++ F G +PL++G L F+ N+L C P R++KK IGK+ F
Sbjct: 19 CDGCKSCGAILELDGCGHRFHPRCIFSWPATRCELCAA-----------PVTTLRVFREFKNLQNSG------VRKGKWSADEHKYANMMMKQFQLGALPLADGLHLRGFIANLLQCDPLRVTKKYAGQAIGKQNF 137
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A836CP88_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP88_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.200e-9 Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 469 RTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQR 651
R G+W E YA+R++A+F AG +PL++GT L FL +LNC P R+SKK IGK+ F+R
Sbjct: 5 RRGKWTQEEDAYARRLIAEFKAGLLPLTDGTTLRTFLSIMLNCDPMRISKKFTGAHCIGKQVFRR 69
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A1Z5JMG8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMG8_FISSO) HSP 1 Score: 68.6 bits (166), Expect = 1.290e-9 Identity = 46/156 (29.49%), Postives = 73/156 (46.79%), Query Frame = 1
Query: 235 DQRAVCDLCNVRRADLRG-PCGHKYHARCIY---SMPITRCPVCDADFGNDDGLFILPV------EPYSATTLFEDDERKGRDAEH------------QSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGK 636
D+ C C D+R CG HARC+ + P+T C +C +GL++ P+ E + D + +GR + + RTGRW + E Y +++ F+ G +P+ +G+KL FL N+L SRL+KK+K K
Sbjct: 27 DEYVSCSRCGHGGCDIRVFGCGCTVHARCMALNPNGPLTTCTLCHKP---TNGLYLFPMSFREIDEAAKIASSLLDAKGRGRKRKGAPEDEFPGAYLTERRTGRWTTDEMAYCDKLIEKFEKGEVPIEDGSKLNEFLGNMLKSKQSRLTKKMKNAK 179
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A7S4J6Z5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J6Z5_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 2.030e-8 Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 1
Query: 469 RTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQR 651
R G+W E YA R++ +F AG +PL++GT L FL +LNC P R+SKK IGK+ F+R
Sbjct: 40 RRGKWTPEEESYANRLILEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRR 104
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Match: A0A7S2NX07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NX07_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 3.650e-8 Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 1
Query: 469 RTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQR 651
R G+W E YA R++ +F AG +PL++GT L FL +LNC P R+SKK IGK+ F+R
Sbjct: 162 RRGKWTPEEEAYANRLILEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRR 226 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13024.2292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13024.2292.1 >prot_E-fasciculatus_F_contig13024.2292.1 ID=prot_E-fasciculatus_F_contig13024.2292.1|Name=mRNA_E-fasciculatus_F_contig13024.2292.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=244bp MLPQHVTGMNVGQARGGGGGAPAGGGGGGRGGGGGAGAGEHSSSSSGVKAback to top mRNA from alignment at E-fasciculatus_F_contig13024:374..2634- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13024.2292.1 ID=mRNA_E-fasciculatus_F_contig13024.2292.1|Name=mRNA_E-fasciculatus_F_contig13024.2292.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2261bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13024:374..2634- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13024:374..2634- >mRNA_E-fasciculatus_F_contig13024.2292.1 ID=mRNA_E-fasciculatus_F_contig13024.2292.1|Name=mRNA_E-fasciculatus_F_contig13024.2292.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1464bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13024:374..2634- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |