prot_E-fasciculatus_F_contig13011.2287.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13011.2287.1
Unique Nameprot_E-fasciculatus_F_contig13011.2287.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length76
Homology
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: D7G5F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F3_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 4.560e-9
Identity = 30/42 (71.43%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 MGNLVLFMGLLVIIYTLHILVASAVEAYWVAKQRAKNAVPAA 42
            MGNL LF G L+ I++LHILVASA+EAYW+AKQRA+N VP A
Sbjct:   65 MGNLALFAGFLLTIFSLHILVASAIEAYWLAKQRARNEVPRA 106          
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 8.900e-9
Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    1 MGNLVLFMGLLVIIYTLHILVASAVEAYWVAKQRAKNAVPAAELRQRLFGRESVITYHPVW 61
            MGNL LF GLLVII+T H+LVAS VEAYWVAKQRA+  + +  LR+ L   E  I     W
Sbjct:  234 MGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVI-SRSLRRGLSLSEIPIALSGTW 293          
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 9.100e-9
Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 MGNLVLFMGLLVIIYTLHILVASAVEAYWVAKQRAKNAVPAA 42
            MGNL LF G  VII+++HIL+ASAVEAYW+AKQRA+N +P A
Sbjct:  197 MGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRA 238          
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: A0A6H5JZX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX1_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 1.210e-5
Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 MGNLVLFMGLLVIIYTLHILVASAVEAYWVAKQRAKNAVPAAELRQRL 48
            MGNL LF GLLVII++LHILVASA+EA+W+AK R    +   E  + L
Sbjct:  117 MGNLALFAGLLVIIFSLHILVASAIEAHWLAKVRNGPTLSCREASRAL 164          
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: A0A6H5L250_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L250_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 5.460e-5
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MGNLVLFMGLLVIIYTLHILVASAVEAYWVAKQR 34
            MGNL LF GLLVII++LHILVAS +EA+W+AK R
Sbjct:   99 MGNLALFAGLLVIIFSLHILVASGIEAHWLAKVR 132          
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: A0A6H5KBY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY1_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 5.730e-5
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MGNLVLFMGLLVIIYTLHILVASAVEAYWVAKQR 34
            MGNL LF GLLVII++LHILVAS +EA+W+AK R
Sbjct:  161 MGNLALFAGLLVIIFSLHILVASGIEAHWLAKVR 194          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G5F3_ECTSI4.560e-971.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9C2_9PHAE8.900e-957.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTJ3_9PHAE9.100e-969.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZX1_9PHAE1.210e-558.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L250_9PHAE5.460e-573.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBY1_9PHAE5.730e-573.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..75
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13011contigE-fasciculatus_F_contig13011:402..871 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13011.2287.1mRNA_E-fasciculatus_F_contig13011.2287.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13011 367..1319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13011.2287.1 ID=prot_E-fasciculatus_F_contig13011.2287.1|Name=mRNA_E-fasciculatus_F_contig13011.2287.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=76bp
MGNLVLFMGLLVIIYTLHILVASAVEAYWVAKQRAKNAVPAAELRQRLFG
RESVITYHPVWPTDGVSSYILSGQQ*
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