mRNA_E-fasciculatus_F_contig13011.2287.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 163 bits (412), Expect = 6.550e-44 Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 2
Query: 2 ATLSFVDHTGAKDSAFYDLTNSLRWVNLWPSESFSDGVASRVLSDEFGQTSEEDDTTPRGISQTLTSDVSSLLFMGNLVLXXXXXVIIYTLHILVASAVEAYWVAKQRAKNAVPAAELRQRLFGRESVITYHPVW---PT--DGVSS 427
ATLSFVD TGA++SAF DLTN+LRWVNLWPSESFS+G+ASR++SDE Q S+EDDTTP ISQT+TS+V SLLFMGNL L VII+T H+LVAS VEAYWVAKQRA+ + + LR+ L E I W PT DG S+
Sbjct: 160 ATLSFVDTTGAEESAFSDLTNNLRWVNLWPSESFSEGIASRIISDEPDQPSDEDDTTPSAISQTVTSNVGSLLFMGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVI-SRSLRRGLSLSEIPIALSGTWSQQPTMDDGSSA 305
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE) HSP 1 Score: 135 bits (341), Expect = 6.100e-34 Identity = 76/123 (61.79%), Postives = 90/123 (73.17%), Query Frame = 2
Query: 2 ATLSFVDHTGAKDSAFYDLTNSLRWVNLWPSESFSDGVASRVLSDEFGQTSEEDD-------TTPRGISQTLTSDVSSLLFMGNLVLXXXXXVIIYTLHILVASAVEAYWVAKQRAKNAVPAA 349
ATLSFVD TG + SA LT +LRWVNLWPS+SFS+GVAS VL +E TS EDD +T RGIS T+ SDV S LFMGNL L VII+++HIL+ASAVEAYW+AKQRA+N +P A
Sbjct: 116 ATLSFVDDTGVEGSALSGLTKNLRWVNLWPSQSFSEGVASWVLCNEPEPTSGEDDDSEEDGDSTQRGISWTVISDVGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRA 238
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: D7G5V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V2_ECTSI) HSP 1 Score: 125 bits (313), Expect = 8.150e-32 Identity = 68/110 (61.82%), Postives = 82/110 (74.55%), Query Frame = 2
Query: 2 ATLSFVDHTGAKDSAFYDLTNSLRWVNLWPSESFSDGVASRVLSDEFGQTSEEDD----TTPRGISQTLTSDVSSLLFMGNLVLXXXXXVIIYTLHILVASAVEAYWVAK 319
ATLSFVD+TGA+DSA TN+LRWVNLWPSE FS+ VASR+ S QT EDD TT RG+S + T+D+ SLLFMGNL L II++LHILVASA+EA+W+AK
Sbjct: 33 ATLSFVDNTGAEDSALSGFTNALRWVNLWPSERFSEVVASRIFSSNPDQTHGEDDGDDDTTKRGMSVSFTNDLGSLLFMGNLALFAGLLAIIFSLHILVASAIEAHWLAK 142
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: A0A6H5L250_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L250_9PHAE) HSP 1 Score: 121 bits (303), Expect = 5.730e-30 Identity = 68/120 (56.67%), Postives = 82/120 (68.33%), Query Frame = 2
Query: 2 ATLSFVDHTGAKDSAFYDLTNSLRWVNLWPSESFSDGVASRVLSDEFGQTSEEDD------------TTPRGISQTLTSDVSSLLFMGNLVLXXXXXVIIYTLHILVASAVEAYWVAKQR 325
ATLSFVD+TGA+DSA N LRWVNLWPSESFS+GVASR+ E + + +DD TT RGIS + T D+ SLLFMGNL L VII++LHILVAS +EA+W+AK R
Sbjct: 13 ATLSFVDNTGAEDSALSAFANVLRWVNLWPSESFSEGVASRIFPSEPDKINGDDDXXXXXXXXXXXXTTKRGISVSFTHDLGSLLFMGNLALFAGLLVIIFSLHILVASGIEAHWLAKVR 132
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: A0A6H5JZX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX1_9PHAE) HSP 1 Score: 122 bits (307), Expect = 2.290e-29 Identity = 71/130 (54.62%), Postives = 85/130 (65.38%), Query Frame = 2
Query: 2 ATLSFVDHTGAKDSAFYDLTNSLRWVNLWPSESFSDGVASRVLSDEFGQTSEEDD--------TTPRGISQTLTSDVSSLLFMGNLVLXXXXXVIIYTLHILVASAVEAYWVAKQRAKNAVPAAELRQRL 367
ATLS VD+TGA+DSA N LRWVNLWPSESFS+GVASR+ E + EDD TT RGIS + T D+ SLLFMGNL L VII++LHILVASA+EA+W+AK R + E + L
Sbjct: 35 ATLSLVDNTGAEDSALSGFANILRWVNLWPSESFSEGVASRIFPSEPDKIYGEDDGXXXXXXXTTKRGISVSFTHDLGSLLFMGNLALFAGLLVIIFSLHILVASAIEAHWLAKVRNGPTLSCREASRAL 164
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: A0A6H5KBY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY1_9PHAE) HSP 1 Score: 121 bits (303), Expect = 7.510e-29 Identity = 68/120 (56.67%), Postives = 82/120 (68.33%), Query Frame = 2
Query: 2 ATLSFVDHTGAKDSAFYDLTNSLRWVNLWPSESFSDGVASRVLSDEFGQTSEEDD------------TTPRGISQTLTSDVSSLLFMGNLVLXXXXXVIIYTLHILVASAVEAYWVAKQR 325
ATLSFVD+TGA+DSA N LRWVNLWPSESFS+GVASR+ E + + +DD TT RGIS + T D+ SLLFMGNL L VII++LHILVAS +EA+W+AK R
Sbjct: 75 ATLSFVDNTGAEDSALSAFANVLRWVNLWPSESFSEGVASRIFPSEPDKINGDDDXXXXXXXXXXXXTTKRGISVSFTHDLGSLLFMGNLALFAGLLVIIFSLHILVASGIEAHWLAKVR 194
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: D7G5F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F3_ECTSI) HSP 1 Score: 116 bits (290), Expect = 6.230e-28 Identity = 62/101 (61.39%), Postives = 75/101 (74.26%), Query Frame = 2
Query: 68 LRWVNLWPSESFSDGVASRVLSDE-------FGQTSEEDDTTPRGISQTLTSDVSSLLFMGNLVLXXXXXVIIYTLHILVASAVEAYWVAKQRAKNAVPAA 349
+RWVNLWPS+SFS+GVASRVLS+E G + E+ D T RGIS T+ SDV S LFMGNL L + I++LHILVASA+EAYW+AKQRA+N VP A
Sbjct: 6 IRWVNLWPSQSFSEGVASRVLSNEPESTAGEDGDSEEDGDATQRGISWTVISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAKQRARNEVPRA 106
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: A0A6H5KD37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD37_9PHAE) HSP 1 Score: 116 bits (291), Expect = 3.190e-27 Identity = 74/167 (44.31%), Postives = 96/167 (57.49%), Query Frame = 2
Query: 2 ATLSFVDHTGAKDSAFYDLTNSLRWVNLWPSESFSDGVASRVLSDEFGQTSEEDD------------TTPRGISQTLTSDVSSLLFMGNLVLXXXXXVIIYTLHILVASAVEAYWVAK----QRAKNAVPAAELR--QRLFGRESVITYHPVWPTDGVSSYILSGQQ 448
ATLS VD+TGA+DSA N LRWVNLWPSESFS+GVASR+ E + + +DD TT RGIS + T D+ SLLFMGNL L II++LHILVASA+EA W+AK + + E R Q G+ ++T+ P ++L Q+
Sbjct: 217 ATLSLVDNTGAEDSALSAFANVLRWVNLWPSESFSEGVASRIFPSEPDKINGDDDXXXXXXXXXXXXTTKRGISVSFTHDLGSLLFMGNLALFAALLAIIFSLHILVASAIEARWLAKIVTIAKPNDGGMGNERRATQSCNGQRMLLTHPPTNKLPSCLCFVLYKQR 383
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 7.250e-18 Identity = 50/119 (42.02%), Postives = 72/119 (60.50%), Query Frame = 2
Query: 2 ATLSFVDHTGAKDSAFYDLTNSLRWVNLWPSESFSDGVASRVLSDEFGQTSEEDDTTPRGISQTLTSDVSSLLFMGNLVLXXXXXVIIYTLHILVASAVEAYWVAKQRAKNAVPAAELR 358
ATLS VD TGA+DS +LT +LRWVNLWP +S R S + ++D + GI T SD+ +L+F+GN+ L + I +HI++ SAVEAYW++K+RA + A+ R
Sbjct: 64 ATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVG-----RTFSSGGERLFQQDGSRACGIEPTSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRR 177
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 2.890e-17 Identity = 51/132 (38.64%), Postives = 70/132 (53.03%), Query Frame = 2
Query: 2 ATLSFVDHTGAKDSAFYDLTNSLRWVNLWPSESFSDGVASRVLSDEFGQTSEE-------------DDTTPRGISQTLTSDVSSLLFMGNLVLXXXXXVIIYTLHILVASAVEAYWVAKQRAKNAVPAAELR 358
ATLS V +TG +DS YD N+LRW+NLWP SF+ + E Q E+ G+ + D+SS +F+GNLVL II+ +HI VAS +EAYW+AK+ A+ V A+ R
Sbjct: 2200 ATLSLVGNTGTEDSKLYDFANNLRWINLWPPASFARSFTPASMYGELDQEGEDAXXXXXXXXXXXXXXXXXEGVENEESGDLSSGVFVGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRR 2331 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13011.2287.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13011.2287.1 >prot_E-fasciculatus_F_contig13011.2287.1 ID=prot_E-fasciculatus_F_contig13011.2287.1|Name=mRNA_E-fasciculatus_F_contig13011.2287.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=76bp MGNLVLFMGLLVIIYTLHILVASAVEAYWVAKQRAKNAVPAAELRQRLFGback to top mRNA from alignment at E-fasciculatus_F_contig13011:367..1319- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13011.2287.1 ID=mRNA_E-fasciculatus_F_contig13011.2287.1|Name=mRNA_E-fasciculatus_F_contig13011.2287.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=953bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13011:367..1319- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13011:367..1319- >mRNA_E-fasciculatus_F_contig13011.2287.1 ID=mRNA_E-fasciculatus_F_contig13011.2287.1|Name=mRNA_E-fasciculatus_F_contig13011.2287.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=456bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13011:367..1319- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |