prot_E-fasciculatus_F_contig1292.2211.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1292.2211.1
Unique Nameprot_E-fasciculatus_F_contig1292.2211.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length211
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1292.2211.1 vs. uniprot
Match: D7G453_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G453_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 1.960e-126
Identity = 192/210 (91.43%), Postives = 198/210 (94.29%), Query Frame = 0 
Query:    1 MRIAVAALGLGLASIIPEGTVDGFVVTAGRVVDGVPSSRSDYLHRAGVVGDRSRLDLSCLSGRNPVSTLSRNGGAGQTSNAGATATALCARPGRGAEEGGQEEGPSSAAAMSGVGSVGSNVLLIVASVMVVKGLLLPENVRHLGFCPTEDPVRGRDTLPWRMMIESGRECGTIPEVMTKYVTAPLAFPGTPEWGMMLNTKEDLAKDAWLQ 210
            MRIAVAALGLGLAS+IP GTVDGFVV AGRVVD VPSSRSD LHRAGV+GDRSRL LS LS RNPVSTLSR+GGA QTS AG TATAL AR GRGAEEGGQE+GPSSAAAMSGVGSVGSNVLL+VASVMVVKGLLLPENVRHLGFCPTEDP+RGRDTLPWRMMIESGRECGTIPEVMTKYVTAPLAFPGTPEWGMMLNTKEDLAKDAWLQ
Sbjct:    1 MRIAVAALGLGLASVIP-GTVDGFVVPAGRVVDVVPSSRSDSLHRAGVMGDRSRLGLSGLSERNPVSTLSRDGGARQTSTAGVTATALSARAGRGAEEGGQEDGPSSAAAMSGVGSVGSNVLLLVASVMVVKGLLLPENVRHLGFCPTEDPIRGRDTLPWRMMIESGRECGTIPEVMTKYVTAPLAFPGTPEWGMMLNTKEDLAKDAWLQ 209
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1292.2211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G453_ECTSI1.960e-12691.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1292contigE-fasciculatus_F_contig1292:5651..9978 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1292.2211.1mRNA_E-fasciculatus_F_contig1292.2211.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1292 4986..9978 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1292.2211.1 ID=prot_E-fasciculatus_F_contig1292.2211.1|Name=mRNA_E-fasciculatus_F_contig1292.2211.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=211bp
MRIAVAALGLGLASIIPEGTVDGFVVTAGRVVDGVPSSRSDYLHRAGVVG
DRSRLDLSCLSGRNPVSTLSRNGGAGQTSNAGATATALCARPGRGAEEGG
QEEGPSSAAAMSGVGSVGSNVLLIVASVMVVKGLLLPENVRHLGFCPTED
PVRGRDTLPWRMMIESGRECGTIPEVMTKYVTAPLAFPGTPEWGMMLNTK
EDLAKDAWLQ*
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