mRNA_E-fasciculatus_F_contig12913.2206.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12913.2206.1 vs. uniprot
Match: A0A6H5JI62_9PHAE (tRNA N(3)-methylcytidine methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI62_9PHAE) HSP 1 Score: 150 bits (379), Expect = 1.650e-42 Identity = 82/123 (66.67%), Postives = 83/123 (67.48%), Query Frame = 1
Query: 1 RHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCG------------------------------------GAPLVEEELSFVRRQYANRAQRVARRRVWVHGKFRKPMDSMVAPV 261
RHDEAQLRFAKGRRLGDN YVRQDGTTSYFFSLEDLRQLFCG GA LVEEELSFVRRQYANRAQ+VARRRVWVHGKFRKPM SM APV
Sbjct: 235 RHDEAQLRFAKGRRLGDNFYVRQDGTTSYFFSLEDLRQLFCGSSPGGSGLRDSSXXXXXXXXXXXTCSGQSNRGWFDGGASLVEEELSFVRRQYANRAQKVARRRVWVHGKFRKPMHSMAAPV 357
BLAST of mRNA_E-fasciculatus_F_contig12913.2206.1 vs. uniprot
Match: A0A7S2MQY1_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQY1_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.620e-22 Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 1 RHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGAPLVEEELSFVRRQYANRAQRVARRRVWVHGKFRKPMDS 246
R DEAQLRF KGR+LGDN YV+QDGT ++F+ +++ L L E+ F+RRQYANRAQ+VAR+RVW+HG+F+K M S
Sbjct: 251 RFDEAQLRFGKGRKLGDNFYVKQDGTRVFYFTCDEVSNLMTT-VGLETLEVDFIRRQYANRAQQVARQRVWIHGRFQKRMGS 331
BLAST of mRNA_E-fasciculatus_F_contig12913.2206.1 vs. uniprot
Match: I2CR87_NANGC (Methyltransferase like 8 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR87_NANGC) HSP 1 Score: 97.8 bits (242), Expect = 1.880e-22 Identity = 47/79 (59.49%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 1 RHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGAPLVEE-ELSFVRRQYANRAQRVARRRVWVHGKFRK 234
R DEAQLRF +G RLG+N Y+R DGT +Y+FS+EDLR++FCG E E +VRRQY NRA RRRVWVH +F K
Sbjct: 261 RWDEAQLRFKRGHRLGENFYLRSDGTRAYYFSVEDLRKMFCGKEGGFREIEAGYVRRQYINRADAATRRRVWVHARFEK 339
BLAST of mRNA_E-fasciculatus_F_contig12913.2206.1 vs. uniprot
Match: A0A4D9D926_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D926_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 3.810e-22 Identity = 47/79 (59.49%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 1 RHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGAPLVEE-ELSFVRRQYANRAQRVARRRVWVHGKFRK 234
R DEAQLRF +G RLG+N Y+R DGT +Y+FS+EDLR++FCG E E +VRRQY NRA RRRVWVH +F K
Sbjct: 378 RWDEAQLRFKRGHRLGENFYLRSDGTRAYYFSVEDLREMFCGKEGGFREIEAGYVRRQYINRADAATRRRVWVHARFEK 456
BLAST of mRNA_E-fasciculatus_F_contig12913.2206.1 vs. uniprot
Match: A0A1V9ZGM9_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGM9_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.410e-21 Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 1 RHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGAPLVEEELSFVRRQYANRAQRVARRRVWVHGKFRKPMDS 246
R+D+AQLRF G +L DN YVRQD T +Y+F+ +++++LF A LVE E ++RRQYANR+Q V R RVW+H F KPM +
Sbjct: 215 RYDQAQLRFKPGHKLADNFYVRQDNTRAYYFTTDEVKELF-EAAGLVERENEYIRRQYANRSQNVVRFRVWIHAVFEKPMAA 295
BLAST of mRNA_E-fasciculatus_F_contig12913.2206.1 vs. uniprot
Match: A0A482S4R5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S4R5_9ARCH) HSP 1 Score: 89.4 bits (220), Expect = 1.460e-21 Identity = 46/79 (58.23%), Postives = 54/79 (68.35%), Query Frame = 1
Query: 1 RHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGAPLVEEELSFVRRQYANRAQRVARRRVWVHGKFRKP 237
R+DEAQLRF KG +L DN YVRQDGT SYFF+ E+LR + EEL + RQYANR QR AR R W+H K +KP
Sbjct: 5 RYDEAQLRFKKGSKLDDNFYVRQDGTCSYFFTCEELRTI-AETVGFECEELDVILRQYANRQQRKARHRCWIHMKIKKP 82
BLAST of mRNA_E-fasciculatus_F_contig12913.2206.1 vs. uniprot
Match: A0A484DZW3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZW3_BRELC) HSP 1 Score: 89.0 bits (219), Expect = 4.360e-21 Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 1 RHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGAPLVEEELSFVRRQYANRAQRVARRRVWVHGKFRKPMDSMVA 255
R+D+AQLRF G +L +N YVRQD T +Y+FS E++ +LF A LV E ++RRQYANR Q V R RVWVH F KP+ ++ A
Sbjct: 25 RYDQAQLRFRAGSKLQENFYVRQDNTRAYYFSTEEIDELFTE-AGLVSIENEYIRRQYANRQQNVVRFRVWVHAIFEKPLKAVGA 108
BLAST of mRNA_E-fasciculatus_F_contig12913.2206.1 vs. uniprot
Match: A0A024U4J4_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4J4_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 5.420e-21 Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 1 RHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGAPLVEEELSFVRRQYANRAQRVARRRVWVHGKFRKPM 240
R+D+AQLRF G +L DN YVRQD T +Y+F+++++R LF A LVE E ++RRQY+NR+Q V R RVWVH F KP+
Sbjct: 217 RYDQAQLRFKPGHKLADNFYVRQDNTRAYYFTIDEVRDLFVA-AGLVERENEYIRRQYSNRSQGVVRFRVWVHAIFEKPL 295
BLAST of mRNA_E-fasciculatus_F_contig12913.2206.1 vs. uniprot
Match: A0A6G0XWX7_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWX7_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.000e-20 Identity = 42/79 (53.16%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 1 RHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGAPLVEEELSFVRRQYANRAQRVARRRVWVHGKFRKP 237
R+D+AQLRF G +L +N YVRQD T +Y+F++E++RQ+F A ++E E ++RRQYANR+Q V R RVW+H F KP
Sbjct: 212 RYDQAQLRFKPGHKLAENFYVRQDNTRAYYFTIEEIRQMFVT-AGMIERENEYIRRQYANRSQGVVRFRVWIHAIFEKP 289
BLAST of mRNA_E-fasciculatus_F_contig12913.2206.1 vs. uniprot
Match: A0A485LAU0_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAU0_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 7.970e-20 Identity = 43/82 (52.44%), Postives = 58/82 (70.73%), Query Frame = 1
Query: 1 RHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGAPLVEEELSFVRRQYANRAQRVARRRVWVHGKFRKPMDS 246
R D+AQLRF G +L DN YVRQD T +Y+F+ +++R LF A +VE E ++RRQYANR+Q V R RVW+H F+KP+
Sbjct: 215 RFDQAQLRFKPGHKLADNFYVRQDNTRAYYFTTDEVRDLFAK-AGMVECENEYIRRQYANRSQGVVRFRVWIHAVFQKPLTE 295 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12913.2206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12913.2206.1 >prot_E-fasciculatus_F_contig12913.2206.1 ID=prot_E-fasciculatus_F_contig12913.2206.1|Name=mRNA_E-fasciculatus_F_contig12913.2206.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=88bp RHDEAQLRFAKGRRLGDNVYVRQDGTTSYFFSLEDLRQLFCGGAPLVEEEback to top mRNA from alignment at E-fasciculatus_F_contig12913:2997..3830- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12913.2206.1 ID=mRNA_E-fasciculatus_F_contig12913.2206.1|Name=mRNA_E-fasciculatus_F_contig12913.2206.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=834bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12913:2997..3830- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12913:2997..3830- >mRNA_E-fasciculatus_F_contig12913.2206.1 ID=mRNA_E-fasciculatus_F_contig12913.2206.1|Name=mRNA_E-fasciculatus_F_contig12913.2206.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=528bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12913:2997..3830- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |