mRNA_E-fasciculatus_F_contig129.2183.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig129.2183.1
Unique NamemRNA_E-fasciculatus_F_contig129.2183.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: A0A6H5JUF1_9PHAE (Thioesterase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF1_9PHAE)

HSP 1 Score: 508 bits (1307), Expect = 1.920e-179
Identity = 247/262 (94.27%), Postives = 253/262 (96.56%), Query Frame = 1
Query:    1 MSSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLTEKL 786
            MSSSALEKWVVCRRVK DASIRL CAAWAGGSASSFNKWTSK+PEAVELHALE PGRMRRSKEDSLTSV AIVEGVAQALV MGLLDKPFALFGHSFGSLVMFELARKLKED GKIPVYL+VSGC PPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTA+EGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLE WSSLTA EFRL+MFGGGHFFLQG+GEQAVLTFLG+VLTEKL
Sbjct:    1 MSSSALEKWVVCRRVKADASIRLFCAAWAGGSASSFNKWTSKMPEAVELHALEFPGRMRRSKEDSLTSVSAIVEGVAQALVTMGLLDKPFALFGHSFGSLVMFELARKLKEDAGKIPVYLVVSGCCPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAYEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLELWSSLTAGEFRLQMFGGGHFFLQGEGEQAVLTFLGNVLTEKL 262          
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: A0A0M0SMK7_9CYAN (Gramicidin dehydrogenase n=1 Tax=Hapalosiphon sp. MRB220 TaxID=1704290 RepID=A0A0M0SMK7_9CYAN)

HSP 1 Score: 187 bits (475), Expect = 9.890e-54
Identity = 105/261 (40.23%), Postives = 143/261 (54.79%), Query Frame = 1
Query:    4 SSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLTEKL 786
            ++S L+ W VC +  P+A IRL C  +AGGSA+ F  W++ LP  VE+ A+ELPGR  R K    T +  +V  +A  L     LDKPFA FGHS G LV FELAR L++  G IP +L VS  R P +       PPI +LP    ++ L  L G PE L +  EL+  F+P IRAD+   E Y Y P+      P+ CPI   GG +D       ++ W   T+A F L M  G HFFL      +  +FL +++ +K+
Sbjct:    3 NTSNLDSWFVCYKPNPEAKIRLFCFPYAGGSANIFRSWSNDLPPTVEICAIELPGRGMRIKLPLFTQLEPLVTELASVLKPN--LDKPFAFFGHSMGGLVSFELARLLRKQYGVIPSHLFVSARRAPQLV---SNKPPIHRLPDAEFLEELRHLNGTPEALLENDELMQLFMPIIRADFAVLENYIYTPQ-----TPLDCPITAFGGLQDQEVNHDQIKAWEEQTSAYFSLHMLPGNHFFLH-----SFQSFLLNIIYKKI 248          
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: A0A326U590_9CHLR (Surfactin synthase thioesterase subunit n=2 Tax=Thermosporothrix TaxID=768650 RepID=A0A326U590_9CHLR)

HSP 1 Score: 186 bits (471), Expect = 4.260e-53
Identity = 90/240 (37.50%), Postives = 137/240 (57.08%), Query Frame = 1
Query:   25 WVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQ 744
            W++C +    A +RL+C  +AGG AS++  W  +LP+ +EL A++LPG   R KE + T +P++VE +A+AL+ +  LD+PFA+FGHS G+L+ FEL R L++   + P +L +SGCR   +       P +  L  + L+D+L    G PEE+    E++   LP  RAD+T +E Y+Y+        P++CPI   GG +D       L+ W   T   F   M  G HFFLQ   +Q
Sbjct:   10 WLICPQTAQQARLRLLCLPYAGGGASAYRSWQQQLPDTIELCAVQLPGHETRLKEQAYTHLPSLVEAMAEALLPV--LDRPFAIFGHSMGALLSFELTRYLRKHAQRSPEHLFLSGCRAAHL---PRTEPDVHTLSDEGLIDYLRRFNGTPEEILQNEEMMQLLLPIFRADFTLYETYQYQ-----HEEPLSCPITVFGGHQDSSVSYQQLQAWRDHTRGAFAAHMLPGNHFFLQPSRDQ 239          
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: A0A6P1A9W5_9CYAN (Thioesterase n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1A9W5_9CYAN)

HSP 1 Score: 184 bits (468), Expect = 1.160e-52
Identity = 97/241 (40.25%), Postives = 136/241 (56.43%), Query Frame = 1
Query:    4 SSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFL 726
            ++S    WV C +  P A +RL C  +AGGSA SF  W  +LP  +E+  +ELPGR  R  E   T +  +++ + +A++    L+KPFA FGHS G+++ FELA+ L ++    PV L VSG RPP +       PP+  LP    +  L    G PEE+ +  EL++ FLP +RAD+   E Y Y P+P      + CPI   GG +D  A  SDL+ W  LT A+F L MF G HFF+
Sbjct:    3 TTSTFNNWVTCPKPNPQAKLRLFCFHYAGGSALSFRTWADRLPNYIEVCPVELPGRGIRLMEPPFTRLQPLLQALEKAILPS--LNKPFAFFGHSMGAVLSFELAQLLAKNHHLSPVQLFVSGRRPPQI---PDPDPPLHNLPEATFLKELRRYNGTPEEVLNNAELMELFLPTLRADFAVLETYVYTPKPR-----LNCPISAFGGWDDWKASASDLQAWEELTNADFSLEMFPGDHFFI 233          
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: A0A1E5QPU9_9CYAN (Putative thioesterase n=2 Tax=unclassified Desertifilum TaxID=2621682 RepID=A0A1E5QPU9_9CYAN)

HSP 1 Score: 184 bits (468), Expect = 1.160e-52
Identity = 104/261 (39.85%), Postives = 139/261 (53.26%), Query Frame = 1
Query:    7 SSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLTEKLS 789
            SS  + W+   +  P A +RL C  +AGG A SF  W+  LP  VE+  +ELPGR  R  E   T +  ++E +A ALV      KPFA  GHS G+LV FELAR L+    ++P+YL++SG R P +       PP+  LP   L+  L    G PE +    EL+   LP +RAD++  E YRY+P P     P+ CPI   GG +D      DLE W   T   F L+MF G HFFL    +  VL  + D+L + LS
Sbjct:    2 SSQSKSWITYPQPNPRAKLRLFCFHYAGGGAVSFRNWSDALPSEVEVCPIELPGRGARLFEQPFTQLQPLIEALAVALVPH--CTKPFAFLGHSMGALVGFELARSLRRKGDRLPLYLLLSGHRAPQL---PDLDPPLHALPDAELLQELRRYNGTPEAVLQNAELMQLLLPTLRADFSVVETYRYQPEP-----PLDCPIFAFGGLQDWKVKPEDLEPWQQQTTQAFTLQMFPGDHFFLHAH-QSLVLRKVSDLLQQVLS 251          
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: K9VZS4_9CYAN (Oleoyl-(Acyl-carrier-protein) hydrolase n=1 Tax=Crinalium epipsammum PCC 9333 TaxID=1173022 RepID=K9VZS4_9CYAN)

HSP 1 Score: 184 bits (467), Expect = 1.630e-52
Identity = 97/258 (37.60%), Postives = 144/258 (55.81%), Query Frame = 1
Query:    4 SSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLT 777
            S S +  WV   +  P A++RL C  +AGGS+  F  W + LP+++E+  +ELPGR  R  E   T +  +VE +A +++    LDKPFA FGHS G+++ FEL R +    G +PV+L+++G   P +     R PPI  LP  A +  L    GMP+++ + TEL++ FLP IRAD+   E Y Y   P     P++CPI   GG +D     ++LE W + T   F L +  G HFF+Q   +  +L  +  VLT
Sbjct:    5 SKSTIGAWVTFPQPNPQANLRLFCFPYAGGSSVIFRTWANNLPKSIEVCPIELPGRGSRFIETPFTRLDLLVEAIAPSILPY--LDKPFAFFGHSMGAVISFELTRLINRKYGLLPVHLLIAGRHAPQL---SDRHPPIHTLPEPAFIQGLCRYNGMPKQVLENTELMEVFLPIIRADFAICETYNYTNDP-----PLSCPITAFGGLQDSETSVAELEAWRNQTNNSFSLHLLPGDHFFIQSD-QLLLLQLISQVLT 251          
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: A0A1Z4JSL1_LEPBY (Putative thioesterase n=1 Tax=Leptolyngbya boryana NIES-2135 TaxID=1973484 RepID=A0A1Z4JSL1_LEPBY)

HSP 1 Score: 183 bits (465), Expect = 3.230e-52
Identity = 98/234 (41.88%), Postives = 137/234 (58.55%), Query Frame = 1
Query:   25 WVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFL 726
            W++  +  P A +RL C  +AGGSAS F  W+ +LP+ +E+ A+ELPGR    +    T +  +VE +AQ+L+    L++PFALFGHS G+L+ FELAR L++  G  P +L VSG   P +     R PPI  LP  A +  L  L G PE +    EL+    P +RAD+ A + YRY+P P      + CPI  LGG +D    R DLE W + T A F++++F G HFFL
Sbjct:    5 WIIRSKPNPQARLRLFCFPYAGGSASIFRSWSDQLPQNIEVCAVELPGRGTLMRLAPYTQLKPLVEAIAQSLLPN--LNQPFALFGHSMGALISFELARFLRQAYGLTPRHLFVSGRAAPYI---PDRDPPIYTLPDAAFIQELRRLNGTPEAVLQNQELMQLLTPILRADFAAIDTYRYQPEPA-----LGCPITALGGLQDLEVSRDDLEAWQTQTIAPFQIQLFLGNHFFL 228          
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: UPI00047E576A (thioesterase II family protein n=1 Tax=Fischerella sp. PCC 9605 TaxID=1173024 RepID=UPI00047E576A)

HSP 1 Score: 182 bits (462), Expect = 9.300e-52
Identity = 96/241 (39.83%), Postives = 134/241 (55.60%), Query Frame = 1
Query:    4 SSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFL 726
            ++S    WV+C +  P+A IRL C  +AGGS++ F +W+  LP  VE+ A+ELPGR  + K      +  +VE +A  L +   LDKPFA FGHS G L+ FELA  L++    +P +L VSG R P +     + PPI  LP    ++ L  L G P+ L +  EL+  FLP +RAD+   E Y Y  +P     P+ CPI   GG +D    R +++ W   T+A F L M  G HFFL
Sbjct:    3 NTSNFNSWVICPKPNPNAKIRLFCFPYAGGSSNIFRRWSDNLPGTVEVCAIELPGRGMQMKLSPFNRLEPLVEELASVLKSN--LDKPFAFFGHSMGGLISFELACLLRKQYDMVPNHLYVSGRRAPQIA---DQKPPIYALPEAEFIEELRRLNGTPQALLENDELMQLFLPILRADFAVLETYVYTQKP-----PLDCPITAFGGLQDQEVSRENIQAWQEQTSASFSLHMLPGDHFFL 233          
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: A0A1Z4J274_9CYAN (Thioesterase n=3 Tax=Nostocales TaxID=1161 RepID=A0A1Z4J274_9CYAN)

HSP 1 Score: 182 bits (461), Expect = 1.310e-51
Identity = 99/242 (40.91%), Postives = 132/242 (54.55%), Query Frame = 1
Query:    1 MSSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFL 726
            M+S+ +  WV C +  P AS+RL C  +AGGS+  F  W+  LP  VE+  +ELPGR  + K  + T +  +V+ +A  L+    LDKPFA FGHS G LV FEL R L+++   IP +L VSG R P +       PPI  LP     + L  L G PE +    EL+   +P +RAD+   E Y Y   P     P+ CPI   GG ED  A   +L+ W + T A F L+MF G HFFL
Sbjct:    1 MTSARIHSWVTCPQPNPQASLRLFCFPYAGGSSVIFRTWSRSLPTTVEVCPIELPGRGTQMKLPAFTQLQPLVQAIAPVLLPH--LDKPFAFFGHSMGGLVSFELVRLLRKEYNIIPDHLFVSGRRAPQI---PDPKPPIHALPEPEFKEELRRLNGTPEAVLQNAELMQLLVPILRADFAVLETYVYTTEP-----PLNCPISAYGGSEDEEASYDELQAWQNQTNAAFSLQMFTGDHFFL 232          
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: UPI00188060A4 (thioesterase II family protein n=1 Tax=Nostoc sp. LEGE 06077 TaxID=915325 RepID=UPI00188060A4)

HSP 1 Score: 181 bits (458), Expect = 4.760e-51
Identity = 100/266 (37.59%), Postives = 141/266 (53.01%), Query Frame = 1
Query:   10 SALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLTEKLS*RVALK 807
            S+   W++C +  P A++RL C  +AGGS+  F +W+  LP +VE+  +ELPGR R+ K     ++ A+V+ +A  +     LDKPFA FGHS G L  FEL R L++    +PV+L +SG R P +       PPI  LP  A ++ L  L G P  + +  EL+  FLP +RAD+   E Y Y P P     P+ CPI   GG +D      +L+ W   T   F L MF G HFFL    +  +LT L   L  ++     LK
Sbjct:    6 SSDNSWIICPKPNPLAALRLFCFPYAGGSSLIFRRWSDYLPFSVEVCTIELPGRGRQIKLPLCNNMDALVDAIASMIFPY--LDKPFAFFGHSMGGLFSFELTRLLRQKYNILPVHLFISGRRAPQI---PPVKPPIHNLPEPAFIEELRHLNGTPPAVLENAELMQLFLPILRADFAVLETYTYTPEP-----PLECPITVFGGLQDSEVDCHELQAWQEQTKTNFNLDMFPGDHFFLHS-AQYGLLTSLAKYLLVEIHQNQTLK 260          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUF1_9PHAE1.920e-17994.27Thioesterase domain-containing protein n=2 Tax=Ect... [more]
A0A0M0SMK7_9CYAN9.890e-5440.23Gramicidin dehydrogenase n=1 Tax=Hapalosiphon sp. ... [more]
A0A326U590_9CHLR4.260e-5337.50Surfactin synthase thioesterase subunit n=2 Tax=Th... [more]
A0A6P1A9W5_9CYAN1.160e-5240.25Thioesterase n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2... [more]
A0A1E5QPU9_9CYAN1.160e-5239.85Putative thioesterase n=2 Tax=unclassified Deserti... [more]
K9VZS4_9CYAN1.630e-5237.60Oleoyl-(Acyl-carrier-protein) hydrolase n=1 Tax=Cr... [more]
A0A1Z4JSL1_LEPBY3.230e-5241.88Putative thioesterase n=1 Tax=Leptolyngbya boryana... [more]
UPI00047E576A9.300e-5239.83thioesterase II family protein n=1 Tax=Fischerella... [more]
A0A1Z4J274_9CYAN1.310e-5140.91Thioesterase n=3 Tax=Nostocales TaxID=1161 RepID=A... [more]
UPI00188060A44.760e-5137.59thioesterase II family protein n=1 Tax=Nostoc sp. ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig129contigE-fasciculatus_F_contig129:1232..4980 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score509.6
Seed ortholog evalue8.7e-142
Seed eggNOG ortholog2880.D8LKB7
Preferred nameOLAH
KEGG rclassRC00014,RC00039
KEGG koko:K01071
KEGG ReactionR04014,R08157,R08158
KEGG Pathwayko00061,ko01100,map00061,map01100
GOsGO:0003674,GO:0003824,GO:0004312,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016295,GO:0016296,GO:0016297,GO:0016740,GO:0016746,GO:0016747,GO:0016787,GO:0016788,GO:0016790,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0047381,GO:0051791,GO:0051792,GO:0071704,GO:0072330,GO:1901576
EggNOG free text desc.dodecanoyl-[acyl-carrier-protein] hydrolase activity
EggNOG OGs2RGSQ@2759,COG3208@1
EC3.1.2.21
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01004
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionfatty acid-ACP thioesterase
Ec32 orthologEc-01_009660.1
Exons6
Model size1155
Cds size792
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927792.6667938-CDS-E-fasciculatus_F_contig129:1231..13091622927792.6667938-CDS-E-fasciculatus_F_contig129:1231..1309Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig129 1232..1309 +
1695995696.9703252-CDS-E-fasciculatus_F_contig129:1231..13091695995696.9703252-CDS-E-fasciculatus_F_contig129:1231..1309Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig129 1232..1309 +
1622927792.6846561-CDS-E-fasciculatus_F_contig129:1719..18171622927792.6846561-CDS-E-fasciculatus_F_contig129:1719..1817Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig129 1720..1817 +
1695995696.981366-CDS-E-fasciculatus_F_contig129:1719..18171695995696.981366-CDS-E-fasciculatus_F_contig129:1719..1817Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig129 1720..1817 +
1622927792.6982994-CDS-E-fasciculatus_F_contig129:2347..24051622927792.6982994-CDS-E-fasciculatus_F_contig129:2347..2405Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig129 2348..2405 +
1695995696.9897368-CDS-E-fasciculatus_F_contig129:2347..24051695995696.9897368-CDS-E-fasciculatus_F_contig129:2347..2405Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig129 2348..2405 +
1622927792.7119434-CDS-E-fasciculatus_F_contig129:3060..32131622927792.7119434-CDS-E-fasciculatus_F_contig129:3060..3213Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig129 3061..3213 +
1695995696.9979367-CDS-E-fasciculatus_F_contig129:3060..32131695995696.9979367-CDS-E-fasciculatus_F_contig129:3060..3213Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig129 3061..3213 +
1622927792.7238433-CDS-E-fasciculatus_F_contig129:3786..39411622927792.7238433-CDS-E-fasciculatus_F_contig129:3786..3941Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig129 3787..3941 +
1695995697.0060833-CDS-E-fasciculatus_F_contig129:3786..39411695995697.0060833-CDS-E-fasciculatus_F_contig129:3786..3941Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig129 3787..3941 +
1622927792.736774-CDS-E-fasciculatus_F_contig129:4367..46171622927792.736774-CDS-E-fasciculatus_F_contig129:4367..4617Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig129 4368..4617 +
1695995697.014181-CDS-E-fasciculatus_F_contig129:4367..46171695995697.014181-CDS-E-fasciculatus_F_contig129:4367..4617Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig129 4368..4617 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927792.7504075-UTR-E-fasciculatus_F_contig129:4617..49801622927792.7504075-UTR-E-fasciculatus_F_contig129:4617..4980Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig129 4618..4980 +
1695995697.0222726-UTR-E-fasciculatus_F_contig129:4617..49801695995697.0222726-UTR-E-fasciculatus_F_contig129:4617..4980Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig129 4618..4980 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig129.2183.1prot_E-fasciculatus_F_contig129.2183.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig129 1232..4617 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig129.2183.1

>prot_E-fasciculatus_F_contig129.2183.1 ID=prot_E-fasciculatus_F_contig129.2183.1|Name=mRNA_E-fasciculatus_F_contig129.2183.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=264bp
MSSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELH
ALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSL
VMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVD
HLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPIT
CPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAV
LTFLGDVLTEKLS*
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mRNA from alignment at E-fasciculatus_F_contig129:1232..4980+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig129.2183.1 ID=mRNA_E-fasciculatus_F_contig129.2183.1|Name=mRNA_E-fasciculatus_F_contig129.2183.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3749bp|location=Sequence derived from alignment at E-fasciculatus_F_contig129:1232..4980+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGCTCTTCAGCCCTTGAGAAGTGGGTCGTCTGTCGCCGAGTTAAGCC AGATGCCTCGATACGGCTCATCTGCGCGGTGAGGGGTCGTGGTCGTTGTC ATAGGCGCGTGCCCGAGTGTAGACTAGATCTGTAAGGATGCGCATGTTTT GAAACTTTGTGCACAGCACCCACCTAAATTGCTGTACACATTGTCGAACG ACCAGCGATTCAGCTTCATGCACCCAAGGTATGGAATGCCGTGCTTGGAC CATAGCCACGGGCGCGGTAGTGCAGCTCTCGAAGTCTCAAACAGCAGGCG CGGCGACACGGCCATAATTGCGCCGCACTGCCAATGGCTACCGCCATATT GCGCCGCACCTCCACACCTCCCACCAACTACATACCTGTTCGTGTTACGT AAGGAAGCTAGCGCGTGCAACTCCGTGTGCATATTTCGGGATGGATCTTA GTGCTCTTATTCATTGCTGTTCTGATGTGTGAAGATAGGCGTGGGCCGGT GGCAGCGCGAGCTCGTTCAACAAGTGGACCTCCAAGCTGCCGGAGGCGGT GGAACTACACGCGCTTGAGCTCCCCGGGAGGATGAGGTAGATACACGGCT TCTTTGCGCTTTTCACAACCCAAAGGGATGTCCGCAGAGCAGTTGTGCGG GCCCGTCCCCGATGGATTGTTGGTTTATGAAGAGCGTTCTTTCACGCGCT AGTGTCTTTGGGTTGCACTGGCAACATATGCCTTTCGAGTGCGTGCTTCG CGTTCTATGTACATGTTGCGTTTCTCATCGCGAACTATTCGCGAACTATT CGCGAACACGCAGCGCACGAAGAGAGTGCAGCCGTTGTTGCCCACATTAT TCGTGCAGTTCCGCTATGGGGATGAGTACCGCAATTTTCCGACATGGAAT ATATTCTTGGAACACCACAAGGTTGATCTATCAGTAAGGACATACAATAC GTACTACACATGGACGGGTATGGAGGCGATCCTGTTGTCAATTTGAGTTG CCCGAGCTACTGTAGCTCCGCGACCGTCTAGATTAGAAAGCCTCCTTCGT TTTGCCGCGATGCTTCAACCATGGCTCATCGTGGGTCACCATGTCCTGCA CATTCCACTAACACAGGCGATCCAAGGAGGATAGCCTGACGTCCGTCCCT GCCATCGTTGAAGGGGTTGCTCAGGTGGGTGGGTGGGCAGGAGGCCAAGA GGAGGCCCGGGCGGATTCGTTGGAATGTATTAGCGGAGTACTCGTTCAGC TAGTTTCGTCTTGTTTGTTCGGGCGAGCGATGTAATCAAAGAGGACGGTA GGGGGATAGAAGAGAGGGGCTAGTCGTGAGAGGTATCAGAGACACAAGGC ATATGAGACAGGCCGGGGGGTAAGGGGCGACGAGGGCTTGCGAAGGAGAG ACAGATGGTAGAATTGCGGTGCCCGAAAGACAGAATGTGCGAGAGGCCGG GGATCCACAGAGCCTTGCAAGATCTATGCTGACTGTTTGCGATCAATGCG ATCGGCAATCGCTGTAACAACCGCCTGTTTCGTCGTGTGCATTACCAGTT TTCTCGCGCGAAGCTAGTACTACATGCGGTAGCTTTCAACGGTTACCCCC CCACACACACAACCTATTGAGTCTTCTCCTTGTACTTCAAAAGCAGGACT CTGTCGCCCATCTCATGCGCCCCCACTGTTGGTAGAACTCTCACCCTTTG ACTTAAAAAAGTGTTCGTTTGTTTATTCCGCTGCAAGACCGACGTATTTT CATTGGTCAGCCGTTTAGCGCGGTCGATGCTATTTAAGAACTCACACACC CACACCCACACCCGCACCCACACCCCAAGGCTCTGGTGGCCATGGGGCTG CTCGATAAGCCATTCGCCCTGTTCGGGCACAGCTTCGGGTCTCTCGTGAT GTTCGAGCTTGCCCGAAAGCTTAAGGAAGACGTCGGGAAAATACCGGTGT ACCTGATCGTGTCCGGGTGCCGTCCCCCAGATGTAAGTTGCAGCCGTAGT CGAAACGCTGTGTATTCATACGGGTCCCTGAAAGGAAGCTCTTCATACAA AATGTAGATGGGAGCTTGCTCCTGTGACCCCTTATGTTTGCAAAAGTTAA AGTTCAAAGAGAGTAAACGCTCTGCGTCAGCCAAGCTCTGTACCAGCCAG AATTTGGTTCAGCCTGAATTTGGTTCATCACTGGAGAACGAGCTGTTTCT GCCAACACGCAGGGTAGGGGGGAGGAGGGTGTCTCCCTGGCACATGTCGC CATGTGCTACCATGTATCATCGTTTTTTGGGCAGGAAGCTAGCTCGTAGA ATGTTTGTGCCTTTGCTTTGCATGCCTCGCATGATCGCTCTATGGACACA AGCAAGACTCGCCCAAGACTAGTTCGTTTTCCCTTTCGCGTTTCTTCCGC CAGCCTCTTTGGTCGTCGACAACCAATTGCGAACATCGTGGTTCCGTAAC AGAAACTATACTTTTATTTTGTGCCCAACAGGCATGCACTATCATCTCCC CCTTCGAACGCTGCTCGACTACCCACGCACGGCGTACGTCCCACGTGCTA CTCAGATGTGCGTCGGCGGTGGGCGTTCGCCCCCGATAAGCCAGCTCCCC CGCGACGCATTGGTAGACCACCTCATCGGCCTCGGGGGCATGCCCGAGGA GTTAAGGGACCAGACGGAGCTCGTGGACTACTTTCTTCCCCCGATTCGGG CGGACTATACGTGAGAGAAATTACAGGGCCGAGACCTTCCAATTGATGAG CGCTTGCAATGACGACAACGGAACTCTTCGCTTGCATGGTGGAACTTAGC CCACAACTTGCGGCCATGCGGGCCGCACGCATGATAAACACTTCCAAATG CTCCCTCTCTCCGTAGGAGACAATGCACACGTTTCCTGCCCCATCGCGAC CGTTGATGCAAGTGTTGCAGATTGCCATCGTAGCCTTTGTCCCCGTGTCT GCCACAGGCATTCTCGTATGCCATTGAGCGAGAAAATCGCGAAAGCGCTC ATCACCCATCGTGCGGTAGAATTTCTCAGCCGCCACAGAAACGATTTCAT GGAAGCTCAAGGACTTTCCGGCAGAGCGTTCATGCTTCCCCACATCCTTT CTTGCCCTTGTTGTGGACTACGCAACGAAAAACAAGCGCTTTCGAGGGCT ACAGGTACGAACCTCGCCCGGGGGACGACTCTCGGCCAATCACGTGCCCA ATCATCTGCCTCGGCGGGGAGGAAGACGGCGGGGCCCCGAGGAGCGACTT GGAGCACTGGTCAAGCCTCACGGCGGCGGAATTCCGCTTGCGAATGTTCG GGGGGGGGCACTTCTTCTTGCAGGGGCAAGGAGAGCAAGCGGTGTTGACT TTTTTGGGTGATGTGTTGACTGAAAAACTGAGTTGAAGGGTGGCTTTAAA GAGGACCAGACCTCCACGAGCTTGTGAGGTGCTTTTTTCGCAATAGTGTT GTCGGGGGGGGTTGCCTTTGACTGTTTTGTGCTGTTAGGCTGAGTTGCTC TTTGTGCTCGTGACAGGTTGCTTTCGAGTGATTCGTTTTGAGTAGGGGGG TTCCTGTTGAACGGTATTGGTTTCGTCGAGTCAAGCAGCTTAGTCTCGTC CCCCGAGTATAGCACGCACCCTCGTCATGTTGGTGCCGTACGAACCACAG CATCTTGTTGAGAGGAAACGACTAGTTGCAAACCACCACCAGATTGAACA GGTCACGCTGAACGGCCGTGAGCGCTTCCTCTGTTATGGTTTGACGAGC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig129:1232..4980+

>mRNA_E-fasciculatus_F_contig129.2183.1 ID=mRNA_E-fasciculatus_F_contig129.2183.1|Name=mRNA_E-fasciculatus_F_contig129.2183.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1584bp|location=Sequence derived from alignment at E-fasciculatus_F_contig129:1232..4980+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGCTCTTCAGCCCTTGAGAAGTGGGTCGTCTGTCGCCGAGTTAAGCC
AGATGCCTCGATACGGCTCATCTGCGCGATGAGCTCTTCAGCCCTTGAGA
AGTGGGTCGTCTGTCGCCGAGTTAAGCCAGATGCCTCGATACGGCTCATC
TGCGCGGCGTGGGCCGGTGGCAGCGCGAGCTCGTTCAACAAGTGGACCTC
CAAGCTGCCGGAGGCGGTGGAACTACACGCGCTTGAGCTCCCCGGGAGGA
TGAGGCGTGGGCCGGTGGCAGCGCGAGCTCGTTCAACAAGTGGACCTCCA
AGCTGCCGGAGGCGGTGGAACTACACGCGCTTGAGCTCCCCGGGAGGATG
AGGCGATCCAAGGAGGATAGCCTGACGTCCGTCCCTGCCATCGTTGAAGG
GGTTGCTCAGGCGATCCAAGGAGGATAGCCTGACGTCCGTCCCTGCCATC
GTTGAAGGGGTTGCTCAGGCTCTGGTGGCCATGGGGCTGCTCGATAAGCC
ATTCGCCCTGTTCGGGCACAGCTTCGGGTCTCTCGTGATGTTCGAGCTTG
CCCGAAAGCTTAAGGAAGACGTCGGGAAAATACCGGTGTACCTGATCGTG
TCCGGGTGCCGTCCCCCAGATGCTCTGGTGGCCATGGGGCTGCTCGATAA
GCCATTCGCCCTGTTCGGGCACAGCTTCGGGTCTCTCGTGATGTTCGAGC
TTGCCCGAAAGCTTAAGGAAGACGTCGGGAAAATACCGGTGTACCTGATC
GTGTCCGGGTGCCGTCCCCCAGATATGTGCGTCGGCGGTGGGCGTTCGCC
CCCGATAAGCCAGCTCCCCCGCGACGCATTGGTAGACCACCTCATCGGCC
TCGGGGGCATGCCCGAGGAGTTAAGGGACCAGACGGAGCTCGTGGACTAC
TTTCTTCCCCCGATTCGGGCGGACTATACATGTGCGTCGGCGGTGGGCGT
TCGCCCCCGATAAGCCAGCTCCCCCGCGACGCATTGGTAGACCACCTCAT
CGGCCTCGGGGGCATGCCCGAGGAGTTAAGGGACCAGACGGAGCTCGTGG
ACTACTTTCTTCCCCCGATTCGGGCGGACTATACCGCTTTCGAGGGCTAC
AGGTACGAACCTCGCCCGGGGGACGACTCTCGGCCAATCACGTGCCCAAT
CATCTGCCTCGGCGGGGAGGAAGACGGCGGGGCCCCGAGGAGCGACTTGG
AGCACTGGTCAAGCCTCACGGCGGCGGAATTCCGCTTGCGAATGTTCGGG
GGGGGGCACTTCTTCTTGCAGGGGCAAGGAGAGCAAGCGGTGTTGACTTT
TTTGGGTGATGTGTTGACTGAAAAACTGAGTTGACGCTTTCGAGGGCTAC
AGGTACGAACCTCGCCCGGGGGACGACTCTCGGCCAATCACGTGCCCAAT
CATCTGCCTCGGCGGGGAGGAAGACGGCGGGGCCCCGAGGAGCGACTTGG
AGCACTGGTCAAGCCTCACGGCGGCGGAATTCCGCTTGCGAATGTTCGGG
GGGGGGCACTTCTTCTTGCAGGGGCAAGGAGAGCAAGCGGTGTTGACTTT
TTTGGGTGATGTGTTGACTGAAAAACTGAGTTGA
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