mRNA_E-fasciculatus_F_contig129.2183.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: A0A6H5JUF1_9PHAE (Thioesterase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF1_9PHAE) HSP 1 Score: 508 bits (1307), Expect = 1.920e-179 Identity = 247/262 (94.27%), Postives = 253/262 (96.56%), Query Frame = 1
Query: 1 MSSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLTEKL 786
MSSSALEKWVVCRRVK DASIRL CAAWAGGSASSFNKWTSK+PEAVELHALE PGRMRRSKEDSLTSV AIVEGVAQALV MGLLDKPFALFGHSFGSLVMFELARKLKED GKIPVYL+VSGC PPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTA+EGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLE WSSLTA EFRL+MFGGGHFFLQG+GEQAVLTFLG+VLTEKL
Sbjct: 1 MSSSALEKWVVCRRVKADASIRLFCAAWAGGSASSFNKWTSKMPEAVELHALEFPGRMRRSKEDSLTSVSAIVEGVAQALVTMGLLDKPFALFGHSFGSLVMFELARKLKEDAGKIPVYLVVSGCCPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAYEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLELWSSLTAGEFRLQMFGGGHFFLQGEGEQAVLTFLGNVLTEKL 262
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: A0A0M0SMK7_9CYAN (Gramicidin dehydrogenase n=1 Tax=Hapalosiphon sp. MRB220 TaxID=1704290 RepID=A0A0M0SMK7_9CYAN) HSP 1 Score: 187 bits (475), Expect = 9.890e-54 Identity = 105/261 (40.23%), Postives = 143/261 (54.79%), Query Frame = 1
Query: 4 SSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLTEKL 786
++S L+ W VC + P+A IRL C +AGGSA+ F W++ LP VE+ A+ELPGR R K T + +V +A L LDKPFA FGHS G LV FELAR L++ G IP +L VS R P + PPI +LP ++ L L G PE L + EL+ F+P IRAD+ E Y Y P+ P+ CPI GG +D ++ W T+A F L M G HFFL + +FL +++ +K+
Sbjct: 3 NTSNLDSWFVCYKPNPEAKIRLFCFPYAGGSANIFRSWSNDLPPTVEICAIELPGRGMRIKLPLFTQLEPLVTELASVLKPN--LDKPFAFFGHSMGGLVSFELARLLRKQYGVIPSHLFVSARRAPQLV---SNKPPIHRLPDAEFLEELRHLNGTPEALLENDELMQLFMPIIRADFAVLENYIYTPQ-----TPLDCPITAFGGLQDQEVNHDQIKAWEEQTSAYFSLHMLPGNHFFLH-----SFQSFLLNIIYKKI 248
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: A0A326U590_9CHLR (Surfactin synthase thioesterase subunit n=2 Tax=Thermosporothrix TaxID=768650 RepID=A0A326U590_9CHLR) HSP 1 Score: 186 bits (471), Expect = 4.260e-53 Identity = 90/240 (37.50%), Postives = 137/240 (57.08%), Query Frame = 1
Query: 25 WVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQ 744
W++C + A +RL+C +AGG AS++ W +LP+ +EL A++LPG R KE + T +P++VE +A+AL+ + LD+PFA+FGHS G+L+ FEL R L++ + P +L +SGCR + P + L + L+D+L G PEE+ E++ LP RAD+T +E Y+Y+ P++CPI GG +D L+ W T F M G HFFLQ +Q
Sbjct: 10 WLICPQTAQQARLRLLCLPYAGGGASAYRSWQQQLPDTIELCAVQLPGHETRLKEQAYTHLPSLVEAMAEALLPV--LDRPFAIFGHSMGALLSFELTRYLRKHAQRSPEHLFLSGCRAAHL---PRTEPDVHTLSDEGLIDYLRRFNGTPEEILQNEEMMQLLLPIFRADFTLYETYQYQ-----HEEPLSCPITVFGGHQDSSVSYQQLQAWRDHTRGAFAAHMLPGNHFFLQPSRDQ 239
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: A0A6P1A9W5_9CYAN (Thioesterase n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1A9W5_9CYAN) HSP 1 Score: 184 bits (468), Expect = 1.160e-52 Identity = 97/241 (40.25%), Postives = 136/241 (56.43%), Query Frame = 1
Query: 4 SSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFL 726
++S WV C + P A +RL C +AGGSA SF W +LP +E+ +ELPGR R E T + +++ + +A++ L+KPFA FGHS G+++ FELA+ L ++ PV L VSG RPP + PP+ LP + L G PEE+ + EL++ FLP +RAD+ E Y Y P+P + CPI GG +D A SDL+ W LT A+F L MF G HFF+
Sbjct: 3 TTSTFNNWVTCPKPNPQAKLRLFCFHYAGGSALSFRTWADRLPNYIEVCPVELPGRGIRLMEPPFTRLQPLLQALEKAILPS--LNKPFAFFGHSMGAVLSFELAQLLAKNHHLSPVQLFVSGRRPPQI---PDPDPPLHNLPEATFLKELRRYNGTPEEVLNNAELMELFLPTLRADFAVLETYVYTPKPR-----LNCPISAFGGWDDWKASASDLQAWEELTNADFSLEMFPGDHFFI 233
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: A0A1E5QPU9_9CYAN (Putative thioesterase n=2 Tax=unclassified Desertifilum TaxID=2621682 RepID=A0A1E5QPU9_9CYAN) HSP 1 Score: 184 bits (468), Expect = 1.160e-52 Identity = 104/261 (39.85%), Postives = 139/261 (53.26%), Query Frame = 1
Query: 7 SSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLTEKLS 789
SS + W+ + P A +RL C +AGG A SF W+ LP VE+ +ELPGR R E T + ++E +A ALV KPFA GHS G+LV FELAR L+ ++P+YL++SG R P + PP+ LP L+ L G PE + EL+ LP +RAD++ E YRY+P P P+ CPI GG +D DLE W T F L+MF G HFFL + VL + D+L + LS
Sbjct: 2 SSQSKSWITYPQPNPRAKLRLFCFHYAGGGAVSFRNWSDALPSEVEVCPIELPGRGARLFEQPFTQLQPLIEALAVALVPH--CTKPFAFLGHSMGALVGFELARSLRRKGDRLPLYLLLSGHRAPQL---PDLDPPLHALPDAELLQELRRYNGTPEAVLQNAELMQLLLPTLRADFSVVETYRYQPEP-----PLDCPIFAFGGLQDWKVKPEDLEPWQQQTTQAFTLQMFPGDHFFLHAH-QSLVLRKVSDLLQQVLS 251
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: K9VZS4_9CYAN (Oleoyl-(Acyl-carrier-protein) hydrolase n=1 Tax=Crinalium epipsammum PCC 9333 TaxID=1173022 RepID=K9VZS4_9CYAN) HSP 1 Score: 184 bits (467), Expect = 1.630e-52 Identity = 97/258 (37.60%), Postives = 144/258 (55.81%), Query Frame = 1
Query: 4 SSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLT 777
S S + WV + P A++RL C +AGGS+ F W + LP+++E+ +ELPGR R E T + +VE +A +++ LDKPFA FGHS G+++ FEL R + G +PV+L+++G P + R PPI LP A + L GMP+++ + TEL++ FLP IRAD+ E Y Y P P++CPI GG +D ++LE W + T F L + G HFF+Q + +L + VLT
Sbjct: 5 SKSTIGAWVTFPQPNPQANLRLFCFPYAGGSSVIFRTWANNLPKSIEVCPIELPGRGSRFIETPFTRLDLLVEAIAPSILPY--LDKPFAFFGHSMGAVISFELTRLINRKYGLLPVHLLIAGRHAPQL---SDRHPPIHTLPEPAFIQGLCRYNGMPKQVLENTELMEVFLPIIRADFAICETYNYTNDP-----PLSCPITAFGGLQDSETSVAELEAWRNQTNNSFSLHLLPGDHFFIQSD-QLLLLQLISQVLT 251
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: A0A1Z4JSL1_LEPBY (Putative thioesterase n=1 Tax=Leptolyngbya boryana NIES-2135 TaxID=1973484 RepID=A0A1Z4JSL1_LEPBY) HSP 1 Score: 183 bits (465), Expect = 3.230e-52 Identity = 98/234 (41.88%), Postives = 137/234 (58.55%), Query Frame = 1
Query: 25 WVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFL 726
W++ + P A +RL C +AGGSAS F W+ +LP+ +E+ A+ELPGR + T + +VE +AQ+L+ L++PFALFGHS G+L+ FELAR L++ G P +L VSG P + R PPI LP A + L L G PE + EL+ P +RAD+ A + YRY+P P + CPI LGG +D R DLE W + T A F++++F G HFFL
Sbjct: 5 WIIRSKPNPQARLRLFCFPYAGGSASIFRSWSDQLPQNIEVCAVELPGRGTLMRLAPYTQLKPLVEAIAQSLLPN--LNQPFALFGHSMGALISFELARFLRQAYGLTPRHLFVSGRAAPYI---PDRDPPIYTLPDAAFIQELRRLNGTPEAVLQNQELMQLLTPILRADFAAIDTYRYQPEPA-----LGCPITALGGLQDLEVSRDDLEAWQTQTIAPFQIQLFLGNHFFL 228
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: UPI00047E576A (thioesterase II family protein n=1 Tax=Fischerella sp. PCC 9605 TaxID=1173024 RepID=UPI00047E576A) HSP 1 Score: 182 bits (462), Expect = 9.300e-52 Identity = 96/241 (39.83%), Postives = 134/241 (55.60%), Query Frame = 1
Query: 4 SSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFL 726
++S WV+C + P+A IRL C +AGGS++ F +W+ LP VE+ A+ELPGR + K + +VE +A L + LDKPFA FGHS G L+ FELA L++ +P +L VSG R P + + PPI LP ++ L L G P+ L + EL+ FLP +RAD+ E Y Y +P P+ CPI GG +D R +++ W T+A F L M G HFFL
Sbjct: 3 NTSNFNSWVICPKPNPNAKIRLFCFPYAGGSSNIFRRWSDNLPGTVEVCAIELPGRGMQMKLSPFNRLEPLVEELASVLKSN--LDKPFAFFGHSMGGLISFELACLLRKQYDMVPNHLYVSGRRAPQIA---DQKPPIYALPEAEFIEELRRLNGTPQALLENDELMQLFLPILRADFAVLETYVYTQKP-----PLDCPITAFGGLQDQEVSRENIQAWQEQTSASFSLHMLPGDHFFL 233
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: A0A1Z4J274_9CYAN (Thioesterase n=3 Tax=Nostocales TaxID=1161 RepID=A0A1Z4J274_9CYAN) HSP 1 Score: 182 bits (461), Expect = 1.310e-51 Identity = 99/242 (40.91%), Postives = 132/242 (54.55%), Query Frame = 1
Query: 1 MSSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFL 726
M+S+ + WV C + P AS+RL C +AGGS+ F W+ LP VE+ +ELPGR + K + T + +V+ +A L+ LDKPFA FGHS G LV FEL R L+++ IP +L VSG R P + PPI LP + L L G PE + EL+ +P +RAD+ E Y Y P P+ CPI GG ED A +L+ W + T A F L+MF G HFFL
Sbjct: 1 MTSARIHSWVTCPQPNPQASLRLFCFPYAGGSSVIFRTWSRSLPTTVEVCPIELPGRGTQMKLPAFTQLQPLVQAIAPVLLPH--LDKPFAFFGHSMGGLVSFELVRLLRKEYNIIPDHLFVSGRRAPQI---PDPKPPIHALPEPEFKEELRRLNGTPEAVLQNAELMQLLVPILRADFAVLETYVYTTEP-----PLNCPISAYGGSEDEEASYDELQAWQNQTNAAFSLQMFTGDHFFL 232
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Match: UPI00188060A4 (thioesterase II family protein n=1 Tax=Nostoc sp. LEGE 06077 TaxID=915325 RepID=UPI00188060A4) HSP 1 Score: 181 bits (458), Expect = 4.760e-51 Identity = 100/266 (37.59%), Postives = 141/266 (53.01%), Query Frame = 1
Query: 10 SALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDVGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLTEKLS*RVALK 807
S+ W++C + P A++RL C +AGGS+ F +W+ LP +VE+ +ELPGR R+ K ++ A+V+ +A + LDKPFA FGHS G L FEL R L++ +PV+L +SG R P + PPI LP A ++ L L G P + + EL+ FLP +RAD+ E Y Y P P P+ CPI GG +D +L+ W T F L MF G HFFL + +LT L L ++ LK
Sbjct: 6 SSDNSWIICPKPNPLAALRLFCFPYAGGSSLIFRRWSDYLPFSVEVCTIELPGRGRQIKLPLCNNMDALVDAIASMIFPY--LDKPFAFFGHSMGGLFSFELTRLLRQKYNILPVHLFISGRRAPQI---PPVKPPIHNLPEPAFIEELRHLNGTPPAVLENAELMQLFLPILRADFAVLETYTYTPEP-----PLECPITVFGGLQDSEVDCHELQAWQEQTKTNFNLDMFPGDHFFLHS-AQYGLLTSLAKYLLVEIHQNQTLK 260 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig129.2183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig129.2183.1 >prot_E-fasciculatus_F_contig129.2183.1 ID=prot_E-fasciculatus_F_contig129.2183.1|Name=mRNA_E-fasciculatus_F_contig129.2183.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=264bp MSSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHback to top mRNA from alignment at E-fasciculatus_F_contig129:1232..4980+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig129.2183.1 ID=mRNA_E-fasciculatus_F_contig129.2183.1|Name=mRNA_E-fasciculatus_F_contig129.2183.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3749bp|location=Sequence derived from alignment at E-fasciculatus_F_contig129:1232..4980+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig129:1232..4980+ >mRNA_E-fasciculatus_F_contig129.2183.1 ID=mRNA_E-fasciculatus_F_contig129.2183.1|Name=mRNA_E-fasciculatus_F_contig129.2183.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1584bp|location=Sequence derived from alignment at E-fasciculatus_F_contig129:1232..4980+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |