mRNA_E-fasciculatus_F_contig1289.2179.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A6H5KFI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI5_9PHAE) HSP 1 Score: 541 bits (1394), Expect = 4.050e-189 Identity = 288/324 (88.89%), Postives = 300/324 (92.59%), Query Frame = 1
Query: 229 MKPCGATSAVLTAVAACVAYAVIFLGGQQQRSGSEGGGEYELGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIF------SRLEVFSHETMGFGTVHLYLARPRPNVR 1182
MKPCGATSAVLTAVAACVAYA IF GGQQQRS SEGGGEYELGSGKMFDSIAPRYDLINKVISLGLDMQWR+AMVRGL+LR GDRVVDMATGTADVAIM+S ELAKLEG PGDR TI GTVEPEV+GIDPSARMLEVGREKVAEAGL SR+RLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRI+A PA D+GA GAT +A GAGG+ASSSSVVAILELQDPESGLLA+ASRAFIKYGAP+LGWVMSGNGAEYGHLKNSILRFPSVSEWTALME+AGKI LEVFSHETMGFGTVHLYLARPRPN R
Sbjct: 1 MKPCGATSAVLTAVAACVAYAFIFWGGQQQRSRSEGGGEYELGSGKMFDSIAPRYDLINKVISLGLDMQWRKAMVRGLELRDGDRVVDMATGTADVAIMISEELAKLEGTPGDRGTISGTVEPEVIGIDPSARMLEVGREKVAEAGLCSRIRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIMATPALDAGAHGATDDAGGAGGQASSSSVVAILELQDPESGLLASASRAFIKYGAPLLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEDAGKIHLVAPLPPGLEVFSHETMGFGTVHLYLARPRPNTR 324
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: D8LTT5_ECTSI (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT5_ECTSI) HSP 1 Score: 410 bits (1055), Expect = 1.840e-138 Identity = 221/243 (90.95%), Postives = 229/243 (94.24%), Query Frame = 1
Query: 367 MFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKI 1095
MFDSIAPRYDLINKVISLGLDMQWRRAMVRGL LRAGDRVVDMATGTADVAIM+S ELAKLEGAP TIPGTVEPEV+GIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDR KAL EIRRI+A PA D+GAQGAT +A GAGG ASSSSVVAILELQDPESGLLA+A+RAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALM +AGKI
Sbjct: 1 MFDSIAPRYDLINKVISLGLDMQWRRAMVRGLGLRAGDRVVDMATGTADVAIMISEELAKLEGAP--EGTIPGTVEPEVIGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRSKALEEIRRIMATPALDAGAQGATEDAGGAGGHASSSSVVAILELQDPESGLLASATRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMGDAGKI 241
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A7S2XAZ6_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XAZ6_9EUKA) HSP 1 Score: 213 bits (543), Expect = 7.010e-62 Identity = 130/278 (46.76%), Postives = 171/278 (61.51%), Query Frame = 1
Query: 337 GGEYELGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHETMGFGTVHLYLARPR 1170
GGE LGSG MFD I RYDLIN+V+SLG+D WRR +V+ L+LR GD V+D+ATGTADVAI+ + + PG + V+GIDPSA+M+ GREKV L +V L++GDA +L DI GS DKL+MAFGIRN+PDRP ALRE+RR++ R S S VAILE +P+ G+L +R I+Y P LG ++SG EY HL++SI FPS +++ +ME+A L+V E M F +V LY+A PR
Sbjct: 30 GGE-TLGSGAMFDKIFERYDLINRVMSLGMDQSWRRELVQALELRRGDSVLDLATGTADVAIL------EAQAEPGAK----------VLGIDPSAKMVGRGREKVQGLDLGEQVTLRVGDAMNLQDIESGSFDKLSMAFGIRNIPDRPLALREMRRVV---------------------RDSPDSRVAILEFTEPQGGILQFCARMMIRYVLPRLGALLSGKWDEYMHLQDSIAAFPSATDFADVMEKAN-----LKVLQVEEMMFSSVILYVASPR 264
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A7S2V4B4_9STRA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4B4_9STRA) HSP 1 Score: 211 bits (537), Expect = 1.180e-60 Identity = 125/280 (44.64%), Postives = 171/280 (61.07%), Query Frame = 1
Query: 343 EYELGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRE-----TIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHETMGFGTVHLYLARP 1167
E E+GSG+MFD+IA YD INK++SLGLD WR MV L+L+ D+V+D+ATGTADVAI+V ++ +L G++ + P + +VVGIDPSA ML+ GR+KV E L V LQ+GDAQDL + S DK+TM+FGIRNVPD+ AL EI R++ + S +S V I+E +P+ G++A SR FI+Y PVLG+ SG+ EY HL+ SI+ FP WT M+ A L+V E + FG V+L++A P
Sbjct: 35 EVEMGSGRMFDTIAAHYDSINKMMSLGLDQTWRGKMVAALELQHEDKVLDLATGTADVAILVGQKITELAKKSGNQHCSNDGSCPAGKQ-QVVGIDPSANMLDNGRKKVTEKELDQVVTLQLGDAQDLKGLKSSSFDKVTMSFGIRNVPDQDAALSEIYRVV---------------------KKSENSRVVIMEFHNPQKGVMAPMSRFFIQYITPVLGYFFSGSLDEYSHLQKSIMEFPDPDVWTEKMKAAN-----LDVIKSEDIFFGIVYLHIAVP 287
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A835YHX6_9STRA (UbiE/COQ5 methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX6_9STRA) HSP 1 Score: 205 bits (521), Expect = 1.140e-58 Identity = 128/281 (45.55%), Postives = 168/281 (59.79%), Query Frame = 1
Query: 343 EYELGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIM------VSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHETMGFGTVHLYLARP 1167
E LGSG MFDSIA +YD++N+ +SLG+DM WR+ +++ LQL+ GDRV+D+ATGTADVAI+ E A G+ G + G V VGIDPSA ML GR+KVA GL V+LQ+GDAQ L ++++ S DK++M+FGIRNVPDR KALREI R+ A GAT VAI++L P +G+ A RA +K+ VLG ++SG +YGHL+ SI FP W M +AG L V+ + G V LYLA P
Sbjct: 12 EAPLGSGSMFDSIAGQYDIVNRFLSLGMDMSWRKILLQELQLQPGDRVLDLATGTADVAILEGEALRAMAEAAASSGSKGAGKQKKGMV----VGIDPSANMLAHGRDKVAAKGLDGIVKLQLGDAQALKELSNRSFDKISMSFGIRNVPDRAKALREIHRVAA--------PGAT---------------VAIMDLHAPTTGIFAPLGRAAVKFLPTVLG-LLSGAPDQYGHLERSIFAFPEPDAWQDAMRDAG-----LPVYRAVPLCLGCVWLYLAHP 259
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A7S0DP24_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DP24_9EUKA) HSP 1 Score: 205 bits (522), Expect = 1.400e-58 Identity = 121/276 (43.84%), Postives = 166/276 (60.14%), Query Frame = 1
Query: 340 GEYELGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHETMGFGTVHLYLARP 1167
GE LGSG+MFD +APRYDLIN+V+SL +D WR +V L+L+ GDRV+D+ATGTADVAI+ E +G EV+GIDPS M+E+GR K+ GL +R+ LQIGDA L I D S DK+++AFGIRN+PDR +AL+EIRR++ R S S VA+LE +P G++ +R +I++ P+LG ++SG EY HL++SI FP+ E+ +ME+AG L V M F +V L+ A P
Sbjct: 35 GEPALGSGRMFDEVAPRYDLINRVMSLTMDQSWRLELVSSLELQDGDRVLDLATGTADVAIL---EAKDEKGV-------------EVLGIDPSENMIELGRSKILNEGLENRISLQIGDAMALDTIQDASFDKVSIAFGIRNIPDRLQALKEIRRVV---------------------RDSPGSRVAVLEFTEPHGGIIEFFARLYIRHVVPLLGSILSGKWREYMHLESSIAEFPAPDEFKLIMEKAG-----LRVTDIRYMMFNSVILFTATP 268
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A4D9D399_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D399_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.380e-55 Identity = 126/291 (43.30%), Postives = 171/291 (58.76%), Query Frame = 1
Query: 310 QQQRSGSEGGGEYE-----LGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHETMGFGTVHLYLARP 1167
Q + +G EG E + LGSG MFD++A YD +NK++SLGLD WR ++ GL+L+ GD+V+D+ATGTADVA++ + G +V GIDPSA ML +G EK+A GL S VRL +GDAQ + ++A SVDK++M+FGIRNV DR AL+E+ R++ + S +S V ILE Q P++G L + ++YGAP LG +G EY HL+ SIL FPS E+ ALMEE G + + ET GFG V L+LARP
Sbjct: 91 QLKMTGGEGSSERKEARAPLGSGLMFDAVAKHYDRMNKLMSLGLDQSWRWFLIEGLELQEGDKVLDLATGTADVAVLAAEAFLARNWTGG-----------QVWGIDPSAGMLRIGEEKIAAKGLDSVVRLTLGDAQAMGEVASDSVDKISMSFGIRNVEDRLSALKEMARVL---------------------KKSPASRVGILEFQLPQAGPLRWVAEFMVRYGAPFLGAFFTGLKEEYVHLRRSILEFPSPEEFVALMEEGGLVVEEVR----ET-GFGAVSLFLARP 344
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A7X7GQ47_9DELT (Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X7GQ47_9DELT) HSP 1 Score: 194 bits (494), Expect = 7.220e-55 Identity = 120/273 (43.96%), Postives = 157/273 (57.51%), Query Frame = 1
Query: 355 GSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHETMGFGTVHLYLARPRP 1173
GSG+MFD IA RYDL+N+++SLG+D +WR+ L+L G RV+D+ATGTAD+A++V+ + +VG+DPSARMLEVGR KV AGL R+ L GDAQ+L D S D +AFGIRNVPDRP+ALRE+ R+ GGR VAILEL +P GLL +R + P LG ++SG EY +L+ SI FP E+ +ME AG LEV + + FG HLY+ARP+P
Sbjct: 20 GSGEMFDRIAERYDLLNRILSLGIDQRWRKLTTSALELPEGGRVLDLATGTADLAMLVARREPTVS----------------IVGLDPSARMLEVGRRKVGAAGLDGRIELVQGDAQELP-FEDDSFDGTCIAFGIRNVPDRPRALREMARVTKP-----------------GGR------VAILELSEPRKGLLGPLARFHVHTVVPWLGSLLSG-AREYRYLQRSIAAFPPAEEFAGIMEAAG-----LEVLRVQPLTFGVAHLYVARPQP 246
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: C5KJ96_PERM5 (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KJ96_PERM5) HSP 1 Score: 193 bits (491), Expect = 5.780e-54 Identity = 116/278 (41.73%), Postives = 162/278 (58.27%), Query Frame = 1
Query: 343 EYELGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHETMGFGTVHLYLARPRPN 1176
+ GSGKMFD IA YD+ N+ +SLGLD WRRAM+ L LR+ D+++D+ATGT DVAIM + +A L V GIDPS M+ VG++KV L RV L++GDAQ+L + D S+DK+TM+FGIRNVPDRP+ALRE+ R++ + +PDS +V ILE P +LA ++ F++Y P+LG ++SGN EY +L+ SI FP+ E+T ++ G L+V E G V LY+A+ N
Sbjct: 51 QQRFGSGKMFDHIAEYYDMGNRAMSLGLDQGWRRAMLEALSLRSDDKLLDLATGTGDVAIMAA-HMANLSN---------------VRGIDPSVGMVSVGKDKVIAEDLDKRVFLEVGDAQNLTTVPDQSIDKITMSFGIRNVPDRPRALREMSRVLVS-SPDS--------------------LVGILEFTAPTGTILAPIAKYFVRYVVPILGGLVSGNMDEYRYLEKSIFEFPTPEEFTNIINANG-----LKVIKVEHFVSGVVQLYIAQKAYN 286
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A7R9W2N3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W2N3_9STRA) HSP 1 Score: 191 bits (486), Expect = 6.140e-53 Identity = 128/293 (43.69%), Postives = 169/293 (57.68%), Query Frame = 1
Query: 349 ELGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVR-----GLQLRA-----GDRVVDMATGTADVAIMVSGELA---KLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPE--SGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALME-----EAGKIFSRLEVFSHETMGFGTVHLYLARP 1167
+ G+G MFD IAPRYD IN+ ++L LD WRR MVR G R G R++D+ATGTADVAI++ GE A + EG D T ++G+DPSA M+EVGREKV+ LS + LQIGDA+DL + D S D TM+FGIRNVP+R AL EI R++ + +G + + + ILE +P+ +G+LA +R FI++ P +G V+SG EY HL+NSI FPS E+ ALME GK R+E M FG+V LYLA P
Sbjct: 39 DFGTGAMFDQIAPRYDFINRALALNLDTAWRRKMVREVTDGGELFRRDTGGKGARILDLATGTADVAILL-GEAAAEAEAEGTGSDASTT-------ILGVDPSANMIEVGREKVSRRSLSEVITLQIGDARDLKGLKDSSFDAATMSFGIRNVPERDVALCEIHRVL--------------KKEGNKSKNNIGGKLGILEFSEPQPGTGVLAYLARLFIRHVVPAMGAVLSGAPREYMHLQNSIREFPSPEEFKALMEGLECGRGGKGTFRVEEIVQ--MNFGSVQLYLATP 307 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1289.2179.1 >prot_E-fasciculatus_F_contig1289.2179.1 ID=prot_E-fasciculatus_F_contig1289.2179.1|Name=mRNA_E-fasciculatus_F_contig1289.2179.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=319bp MKPCGATSAVLTAVAACVAYAVIFLGGQQQRSGSEGGGEYELGSGKMFDSback to top mRNA from alignment at E-fasciculatus_F_contig1289:9510..14587+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1289.2179.1 ID=mRNA_E-fasciculatus_F_contig1289.2179.1|Name=mRNA_E-fasciculatus_F_contig1289.2179.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5078bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1289:9510..14587+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1289:9510..14587+ >mRNA_E-fasciculatus_F_contig1289.2179.1 ID=mRNA_E-fasciculatus_F_contig1289.2179.1|Name=mRNA_E-fasciculatus_F_contig1289.2179.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1914bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1289:9510..14587+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |