mRNA_E-fasciculatus_F_contig1289.2179.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1289.2179.1
Unique NamemRNA_E-fasciculatus_F_contig1289.2179.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A6H5KFI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI5_9PHAE)

HSP 1 Score: 541 bits (1394), Expect = 4.050e-189
Identity = 288/324 (88.89%), Postives = 300/324 (92.59%), Query Frame = 1
Query:  229 MKPCGATSAVLTAVAACVAYAVIFLGGQQQRSGSEGGGEYELGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIF------SRLEVFSHETMGFGTVHLYLARPRPNVR 1182
            MKPCGATSAVLTAVAACVAYA IF GGQQQRS SEGGGEYELGSGKMFDSIAPRYDLINKVISLGLDMQWR+AMVRGL+LR GDRVVDMATGTADVAIM+S ELAKLEG PGDR TI GTVEPEV+GIDPSARMLEVGREKVAEAGL SR+RLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRI+A PA D+GA GAT +A GAGG+ASSSSVVAILELQDPESGLLA+ASRAFIKYGAP+LGWVMSGNGAEYGHLKNSILRFPSVSEWTALME+AGKI         LEVFSHETMGFGTVHLYLARPRPN R
Sbjct:    1 MKPCGATSAVLTAVAACVAYAFIFWGGQQQRSRSEGGGEYELGSGKMFDSIAPRYDLINKVISLGLDMQWRKAMVRGLELRDGDRVVDMATGTADVAIMISEELAKLEGTPGDRGTISGTVEPEVIGIDPSARMLEVGREKVAEAGLCSRIRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIMATPALDAGAHGATDDAGGAGGQASSSSVVAILELQDPESGLLASASRAFIKYGAPLLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEDAGKIHLVAPLPPGLEVFSHETMGFGTVHLYLARPRPNTR 324          
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: D8LTT5_ECTSI (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT5_ECTSI)

HSP 1 Score: 410 bits (1055), Expect = 1.840e-138
Identity = 221/243 (90.95%), Postives = 229/243 (94.24%), Query Frame = 1
Query:  367 MFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKI 1095
            MFDSIAPRYDLINKVISLGLDMQWRRAMVRGL LRAGDRVVDMATGTADVAIM+S ELAKLEGAP    TIPGTVEPEV+GIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDR KAL EIRRI+A PA D+GAQGAT +A GAGG ASSSSVVAILELQDPESGLLA+A+RAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALM +AGKI
Sbjct:    1 MFDSIAPRYDLINKVISLGLDMQWRRAMVRGLGLRAGDRVVDMATGTADVAIMISEELAKLEGAP--EGTIPGTVEPEVIGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRSKALEEIRRIMATPALDAGAQGATEDAGGAGGHASSSSVVAILELQDPESGLLASATRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMGDAGKI 241          
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A7S2XAZ6_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XAZ6_9EUKA)

HSP 1 Score: 213 bits (543), Expect = 7.010e-62
Identity = 130/278 (46.76%), Postives = 171/278 (61.51%), Query Frame = 1
Query:  337 GGEYELGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHETMGFGTVHLYLARPR 1170
            GGE  LGSG MFD I  RYDLIN+V+SLG+D  WRR +V+ L+LR GD V+D+ATGTADVAI+      + +  PG +          V+GIDPSA+M+  GREKV    L  +V L++GDA +L DI  GS DKL+MAFGIRN+PDRP ALRE+RR++                     R S  S VAILE  +P+ G+L   +R  I+Y  P LG ++SG   EY HL++SI  FPS +++  +ME+A      L+V   E M F +V LY+A PR
Sbjct:   30 GGE-TLGSGAMFDKIFERYDLINRVMSLGMDQSWRRELVQALELRRGDSVLDLATGTADVAIL------EAQAEPGAK----------VLGIDPSAKMVGRGREKVQGLDLGEQVTLRVGDAMNLQDIESGSFDKLSMAFGIRNIPDRPLALREMRRVV---------------------RDSPDSRVAILEFTEPQGGILQFCARMMIRYVLPRLGALLSGKWDEYMHLQDSIAAFPSATDFADVMEKAN-----LKVLQVEEMMFSSVILYVASPR 264          
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A7S2V4B4_9STRA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4B4_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.180e-60
Identity = 125/280 (44.64%), Postives = 171/280 (61.07%), Query Frame = 1
Query:  343 EYELGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRE-----TIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHETMGFGTVHLYLARP 1167
            E E+GSG+MFD+IA  YD INK++SLGLD  WR  MV  L+L+  D+V+D+ATGTADVAI+V  ++ +L    G++      + P   + +VVGIDPSA ML+ GR+KV E  L   V LQ+GDAQDL  +   S DK+TM+FGIRNVPD+  AL EI R++                     + S +S V I+E  +P+ G++A  SR FI+Y  PVLG+  SG+  EY HL+ SI+ FP    WT  M+ A      L+V   E + FG V+L++A P
Sbjct:   35 EVEMGSGRMFDTIAAHYDSINKMMSLGLDQTWRGKMVAALELQHEDKVLDLATGTADVAILVGQKITELAKKSGNQHCSNDGSCPAGKQ-QVVGIDPSANMLDNGRKKVTEKELDQVVTLQLGDAQDLKGLKSSSFDKVTMSFGIRNVPDQDAALSEIYRVV---------------------KKSENSRVVIMEFHNPQKGVMAPMSRFFIQYITPVLGYFFSGSLDEYSHLQKSIMEFPDPDVWTEKMKAAN-----LDVIKSEDIFFGIVYLHIAVP 287          
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A835YHX6_9STRA (UbiE/COQ5 methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX6_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.140e-58
Identity = 128/281 (45.55%), Postives = 168/281 (59.79%), Query Frame = 1
Query:  343 EYELGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIM------VSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHETMGFGTVHLYLARP 1167
            E  LGSG MFDSIA +YD++N+ +SLG+DM WR+ +++ LQL+ GDRV+D+ATGTADVAI+         E A   G+ G  +   G V    VGIDPSA ML  GR+KVA  GL   V+LQ+GDAQ L ++++ S DK++M+FGIRNVPDR KALREI R+ A         GAT               VAI++L  P +G+ A   RA +K+   VLG ++SG   +YGHL+ SI  FP    W   M +AG     L V+    +  G V LYLA P
Sbjct:   12 EAPLGSGSMFDSIAGQYDIVNRFLSLGMDMSWRKILLQELQLQPGDRVLDLATGTADVAILEGEALRAMAEAAASSGSKGAGKQKKGMV----VGIDPSANMLAHGRDKVAAKGLDGIVKLQLGDAQALKELSNRSFDKISMSFGIRNVPDRAKALREIHRVAA--------PGAT---------------VAIMDLHAPTTGIFAPLGRAAVKFLPTVLG-LLSGAPDQYGHLERSIFAFPEPDAWQDAMRDAG-----LPVYRAVPLCLGCVWLYLAHP 259          
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A7S0DP24_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DP24_9EUKA)

HSP 1 Score: 205 bits (522), Expect = 1.400e-58
Identity = 121/276 (43.84%), Postives = 166/276 (60.14%), Query Frame = 1
Query:  340 GEYELGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHETMGFGTVHLYLARP 1167
            GE  LGSG+MFD +APRYDLIN+V+SL +D  WR  +V  L+L+ GDRV+D+ATGTADVAI+   E    +G              EV+GIDPS  M+E+GR K+   GL +R+ LQIGDA  L  I D S DK+++AFGIRN+PDR +AL+EIRR++                     R S  S VA+LE  +P  G++   +R +I++  P+LG ++SG   EY HL++SI  FP+  E+  +ME+AG     L V     M F +V L+ A P
Sbjct:   35 GEPALGSGRMFDEVAPRYDLINRVMSLTMDQSWRLELVSSLELQDGDRVLDLATGTADVAIL---EAKDEKGV-------------EVLGIDPSENMIELGRSKILNEGLENRISLQIGDAMALDTIQDASFDKVSIAFGIRNIPDRLQALKEIRRVV---------------------RDSPGSRVAVLEFTEPHGGIIEFFARLYIRHVVPLLGSILSGKWREYMHLESSIAEFPAPDEFKLIMEKAG-----LRVTDIRYMMFNSVILFTATP 268          
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A4D9D399_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D399_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.380e-55
Identity = 126/291 (43.30%), Postives = 171/291 (58.76%), Query Frame = 1
Query:  310 QQQRSGSEGGGEYE-----LGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHETMGFGTVHLYLARP 1167
            Q + +G EG  E +     LGSG MFD++A  YD +NK++SLGLD  WR  ++ GL+L+ GD+V+D+ATGTADVA++ +          G           +V GIDPSA ML +G EK+A  GL S VRL +GDAQ + ++A  SVDK++M+FGIRNV DR  AL+E+ R++                     + S +S V ILE Q P++G L   +   ++YGAP LG   +G   EY HL+ SIL FPS  E+ ALMEE G +   +     ET GFG V L+LARP
Sbjct:   91 QLKMTGGEGSSERKEARAPLGSGLMFDAVAKHYDRMNKLMSLGLDQSWRWFLIEGLELQEGDKVLDLATGTADVAVLAAEAFLARNWTGG-----------QVWGIDPSAGMLRIGEEKIAAKGLDSVVRLTLGDAQAMGEVASDSVDKISMSFGIRNVEDRLSALKEMARVL---------------------KKSPASRVGILEFQLPQAGPLRWVAEFMVRYGAPFLGAFFTGLKEEYVHLRRSILEFPSPEEFVALMEEGGLVVEEVR----ET-GFGAVSLFLARP 344          
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A7X7GQ47_9DELT (Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X7GQ47_9DELT)

HSP 1 Score: 194 bits (494), Expect = 7.220e-55
Identity = 120/273 (43.96%), Postives = 157/273 (57.51%), Query Frame = 1
Query:  355 GSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHETMGFGTVHLYLARPRP 1173
            GSG+MFD IA RYDL+N+++SLG+D +WR+     L+L  G RV+D+ATGTAD+A++V+     +                 +VG+DPSARMLEVGR KV  AGL  R+ L  GDAQ+L    D S D   +AFGIRNVPDRP+ALRE+ R+                    GGR      VAILEL +P  GLL   +R  +    P LG ++SG   EY +L+ SI  FP   E+  +ME AG     LEV   + + FG  HLY+ARP+P
Sbjct:   20 GSGEMFDRIAERYDLLNRILSLGIDQRWRKLTTSALELPEGGRVLDLATGTADLAMLVARREPTVS----------------IVGLDPSARMLEVGRRKVGAAGLDGRIELVQGDAQELP-FEDDSFDGTCIAFGIRNVPDRPRALREMARVTKP-----------------GGR------VAILELSEPRKGLLGPLARFHVHTVVPWLGSLLSG-AREYRYLQRSIAAFPPAEEFAGIMEAAG-----LEVLRVQPLTFGVAHLYVARPQP 246          
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: C5KJ96_PERM5 (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KJ96_PERM5)

HSP 1 Score: 193 bits (491), Expect = 5.780e-54
Identity = 116/278 (41.73%), Postives = 162/278 (58.27%), Query Frame = 1
Query:  343 EYELGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMVSGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHETMGFGTVHLYLARPRPN 1176
            +   GSGKMFD IA  YD+ N+ +SLGLD  WRRAM+  L LR+ D+++D+ATGT DVAIM +  +A L                 V GIDPS  M+ VG++KV    L  RV L++GDAQ+L  + D S+DK+TM+FGIRNVPDRP+ALRE+ R++ + +PDS                    +V ILE   P   +LA  ++ F++Y  P+LG ++SGN  EY +L+ SI  FP+  E+T ++   G     L+V   E    G V LY+A+   N
Sbjct:   51 QQRFGSGKMFDHIAEYYDMGNRAMSLGLDQGWRRAMLEALSLRSDDKLLDLATGTGDVAIMAA-HMANLSN---------------VRGIDPSVGMVSVGKDKVIAEDLDKRVFLEVGDAQNLTTVPDQSIDKITMSFGIRNVPDRPRALREMSRVLVS-SPDS--------------------LVGILEFTAPTGTILAPIAKYFVRYVVPILGGLVSGNMDEYRYLEKSIFEFPTPEEFTNIINANG-----LKVIKVEHFVSGVVQLYIAQKAYN 286          
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Match: A0A7R9W2N3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W2N3_9STRA)

HSP 1 Score: 191 bits (486), Expect = 6.140e-53
Identity = 128/293 (43.69%), Postives = 169/293 (57.68%), Query Frame = 1
Query:  349 ELGSGKMFDSIAPRYDLINKVISLGLDMQWRRAMVR-----GLQLRA-----GDRVVDMATGTADVAIMVSGELA---KLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSRVRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAPDSGAQGATGEADGAGGRASSSSVVAILELQDPE--SGLLATASRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALME-----EAGKIFSRLEVFSHETMGFGTVHLYLARP 1167
            + G+G MFD IAPRYD IN+ ++L LD  WRR MVR     G   R      G R++D+ATGTADVAI++ GE A   + EG   D  T        ++G+DPSA M+EVGREKV+   LS  + LQIGDA+DL  + D S D  TM+FGIRNVP+R  AL EI R++              + +G   + +    + ILE  +P+  +G+LA  +R FI++  P +G V+SG   EY HL+NSI  FPS  E+ ALME       GK   R+E      M FG+V LYLA P
Sbjct:   39 DFGTGAMFDQIAPRYDFINRALALNLDTAWRRKMVREVTDGGELFRRDTGGKGARILDLATGTADVAILL-GEAAAEAEAEGTGSDASTT-------ILGVDPSANMIEVGREKVSRRSLSEVITLQIGDARDLKGLKDSSFDAATMSFGIRNVPERDVALCEIHRVL--------------KKEGNKSKNNIGGKLGILEFSEPQPGTGVLAYLARLFIRHVVPAMGAVLSGAPREYMHLQNSIREFPSPEEFKALMEGLECGRGGKGTFRVEEIVQ--MNFGSVQLYLATP 307          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1289.2179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFI5_9PHAE4.050e-18988.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTT5_ECTSI1.840e-13890.95Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
A0A7S2XAZ6_9EUKA7.010e-6246.76Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S2V4B4_9STRA1.180e-6044.642-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
A0A835YHX6_9STRA1.140e-5845.55UbiE/COQ5 methyltransferase n=1 Tax=Tribonema minu... [more]
A0A7S0DP24_9EUKA1.400e-5843.84Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A4D9D399_9STRA1.380e-5543.30Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7X7GQ47_9DELT7.220e-5543.96Ubiquinone/menaquinone biosynthesis C-methyltransf... [more]
C5KJ96_PERM55.780e-5441.732-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
A0A7R9W2N3_9STRA6.140e-5343.69Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1289contigE-fasciculatus_F_contig1289:9510..14587 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score417.2
Seed ortholog evalue7.1e-114
Seed eggNOG ortholog2880.D8LTT5
EggNOG free text desc.2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
EggNOG OGsCOG2226@1,KOG1540@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-28_002880.1
Exons7
Model size1637
Cds size957
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927792.1560638-UTR-E-fasciculatus_F_contig1289:9509..97371622927792.1560638-UTR-E-fasciculatus_F_contig1289:9509..9737Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1289 9510..9737 +
1695995696.6835876-UTR-E-fasciculatus_F_contig1289:9509..97371695995696.6835876-UTR-E-fasciculatus_F_contig1289:9509..9737Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1289 9510..9737 +
1622927792.2800276-UTR-E-fasciculatus_F_contig1289:14135..145871622927792.2800276-UTR-E-fasciculatus_F_contig1289:14135..14587Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1289 14136..14587 +
1695995696.8053396-UTR-E-fasciculatus_F_contig1289:14135..145871695995696.8053396-UTR-E-fasciculatus_F_contig1289:14135..14587Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1289 14136..14587 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927792.1696858-CDS-E-fasciculatus_F_contig1289:9737..99171622927792.1696858-CDS-E-fasciculatus_F_contig1289:9737..9917Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1289 9738..9917 +
1695995696.70201-CDS-E-fasciculatus_F_contig1289:9737..99171695995696.70201-CDS-E-fasciculatus_F_contig1289:9737..9917Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1289 9738..9917 +
1622927792.190703-CDS-E-fasciculatus_F_contig1289:10614..106711622927792.190703-CDS-E-fasciculatus_F_contig1289:10614..10671Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1289 10615..10671 +
1695995696.7110257-CDS-E-fasciculatus_F_contig1289:10614..106711695995696.7110257-CDS-E-fasciculatus_F_contig1289:10614..10671Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1289 10615..10671 +
1622927792.2019606-CDS-E-fasciculatus_F_contig1289:10919..110901622927792.2019606-CDS-E-fasciculatus_F_contig1289:10919..11090Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1289 10920..11090 +
1695995696.720104-CDS-E-fasciculatus_F_contig1289:10919..110901695995696.720104-CDS-E-fasciculatus_F_contig1289:10919..11090Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1289 10920..11090 +
1622927792.2143474-CDS-E-fasciculatus_F_contig1289:11718..118231622927792.2143474-CDS-E-fasciculatus_F_contig1289:11718..11823Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1289 11719..11823 +
1695995696.7304733-CDS-E-fasciculatus_F_contig1289:11718..118231695995696.7304733-CDS-E-fasciculatus_F_contig1289:11718..11823Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1289 11719..11823 +
1622927792.2308724-CDS-E-fasciculatus_F_contig1289:12309..125331622927792.2308724-CDS-E-fasciculatus_F_contig1289:12309..12533Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1289 12310..12533 +
1695995696.7464466-CDS-E-fasciculatus_F_contig1289:12309..125331695995696.7464466-CDS-E-fasciculatus_F_contig1289:12309..12533Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1289 12310..12533 +
1622927792.2497473-CDS-E-fasciculatus_F_contig1289:13324..134611622927792.2497473-CDS-E-fasciculatus_F_contig1289:13324..13461Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1289 13325..13461 +
1695995696.7680173-CDS-E-fasciculatus_F_contig1289:13324..134611695995696.7680173-CDS-E-fasciculatus_F_contig1289:13324..13461Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1289 13325..13461 +
1622927792.2668426-CDS-E-fasciculatus_F_contig1289:14052..141351622927792.2668426-CDS-E-fasciculatus_F_contig1289:14052..14135Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1289 14053..14135 +
1695995696.7883542-CDS-E-fasciculatus_F_contig1289:14052..141351695995696.7883542-CDS-E-fasciculatus_F_contig1289:14052..14135Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1289 14053..14135 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1289.2179.1prot_E-fasciculatus_F_contig1289.2179.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1289 9738..14135 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1289.2179.1

>prot_E-fasciculatus_F_contig1289.2179.1 ID=prot_E-fasciculatus_F_contig1289.2179.1|Name=mRNA_E-fasciculatus_F_contig1289.2179.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=319bp
MKPCGATSAVLTAVAACVAYAVIFLGGQQQRSGSEGGGEYELGSGKMFDS
IAPRYDLINKVISLGLDMQWRRAMVRGLQLRAGDRVVDMATGTADVAIMV
SGELAKLEGAPGDRETIPGTVEPEVVGIDPSARMLEVGREKVAEAGLSSR
VRLQIGDAQDLADIADGSVDKLTMAFGIRNVPDRPKALREIRRIIAAPAP
DSGAQGATGEADGAGGRASSSSVVAILELQDPESGLLATASRAFIKYGAP
VLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEEAGKIFSRLEVFSHET
MGFGTVHLYLARPRPNVR*
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mRNA from alignment at E-fasciculatus_F_contig1289:9510..14587+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1289.2179.1 ID=mRNA_E-fasciculatus_F_contig1289.2179.1|Name=mRNA_E-fasciculatus_F_contig1289.2179.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5078bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1289:9510..14587+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTCTCTGCTGGACGCAGCCAGCATCAGCAGGTCACCAGACACCAGACACG CTACAGCAGAGGATCTAGCAGATCACCAAGGGGCAGTCCAAGATAGACCA CACCTGTAAATTTGTGTGGATAGGCCAGAAAAACGCGGTGTCATAGACAA AACGCGAGTGATCCGCGAGAGTGTTCCAACACCAAGCCCAGCCGAAAAGA CGGCCTGTGCTTCGATAGCCGAGCTGCAATGAAGCCATGCGGTGCGACGT CTGCAGTGCTAACAGCGGTGGCCGCATGCGTGGCGTACGCTGTCATATTT TTGGGTGGGCAGCAGCAGCGGTCGGGGTCAGAGGGCGGCGGGGAGTATGA GCTCGGGTCGGGGAAGATGTTCGACTCCATTGCTCCTCGGTACGACCTCA TCAACAAGGTACGGCGGCAACGGTTCGGCTCATGATGACTGCTGTTGTTG TTGCGTGTATACCAACACACCAACACCCTGCCCGGTCATGCCGTATCGCA CAGCAGAGGCAGTGGCAGCAGAGGCGATTAATGTAGTGGTGGACAGCCTG ACCAGGAGAATGGTACACTGCGCGTATTCACCAGGATCATGAGGATCATG CGCACACCCTGGTGCACATGTTTCCGTTCCTGCAGCCGGTGCCTGGGGTG TGACGGTGTGTGGATATAACGCTGCCCGGGCCGTTTGGACCCACTACATT GTAGCATTCCTGTTTCTATTCGGTCGGTACCTAGTATGATGCCACCAGGC GCGTGGAGGGCGGATGCCGTGTGGGGGTGATTTGCCGCCGATGCATCCAC CGGTAACTACAAAGCGCTGTTCAGCGGAAAATGAGCTCGAAAGGCATGTC CATCTATCCGTACACTGGGGATAAGCATGCAGGCAAATAGACCATCATCG GTAGTTTTCTAGGGAATGCACGCTTAGTGGCAAGTGTGCGAGTTTATTTT ACACCATCAGAAAGCTCCCGTGATTCCCTCCTCGCATCTAAACGCTCATC ATCCATCCTTGCCCGAAGGCTTGTGCGCGTACATGCTCGCTCATTCTTGC TCTCGTCTCTTGTGACAGTTGACGGTATACTTCTGTCTCATTTTGGTCCA AGCAGGTGATATCCCTTGGGTTGGACATGCAATGGCGAAGAGCTATGGTT CGAGGTCTCCAGGTAAGAGGATGACCTTCGCAGCTGTCAGTCATCACTTT TGCTTGGTAGCAGGGAGTCAAGGCTACTTCATGTAGGGTGAATCATGAAT CACCAACGTTGCAGCACAGGTGACGGACAGCACCGCACAGAAAGAATGGC CGTTACCATGAACAACGGCTACGGGGAGAGGCTTGCACGTATTCCGCCCA CGGGAGTCCTTCGTGTCTGTCTGCTTTGCTCTGTTCTGACCATTCTTGGC GCGGAAAAAGCTGCGAGCTGGAGATAGAGTGGTAGACATGGCCACGGGGA CGGCCGACGTCGCGATCATGGTCTCCGGAGAACTGGCCAAGCTGGAGGGG GCCCCGGGCGACCGAGAAACGATCCCGGGAACGGTCGAACCGGAGGTGGT CGGGATCGACCCTAGCGCGAGGATGCTAGAGGTGAGGTTTACGTTCGAAG GCCAACTGTATCAGACTTCCATAGCTTGGTTGTGGGGACGAGCGTCGCAT GTTCCAGCCCCGAAGCCCGAGGCCATGAAGGCAATACATTGCTCCGGAAT TCAGTTTAATTGGTACGGTGGTTGCACGATAACAATTGTGTGCGTCGACT AGGAATATTTTGAATTGGTGTTGGTAGGAAAACTACGCTCGTTTTGATGT GAACGATCTGTTAGAGCATTAAGGTGTACCCGGGAGACGTGCTGCGCGGA GGCTGGCCTGCTGAAAGGGCTGCACCACGATCTCCCAACATCACTATCGG TTCCTGCTACCCTTCTCTCTGAATGAGTTGGTTCACTTCAGTAAGAGTGC TTCCTTGATGGAAGCATGAAGCCATACCTTGTGGGTTCTCCATGACGATC TGTCGGCGCCGTCTCCGGTGGTATGTTCCATTCTCGCATCACCGTGTCCC GGCGAGCGGCCCGGAAATATATCCCAGAACATTGGCTGTTTTCTTACCGC CCGAAGGTTACGGTGGCAGGGTACAGTAGAGAGTCCAACCTTTCTTCTAT GTAATGCGTTTGTATCAGACCTAGTCATCCCGGAATTCGTCGTCTCCTAT ACGTTTCAGGTTGGGAGGGAGAAGGTTGCGGAGGCGGGGCTGTCTTCTCG GGTGCGCCTTCAAATCGGGGACGCTCAAGATTTGGCGGATATTGCGGACG GATCGGTGGACAAGGTGAGCGCTTGCAGGGGTATGATTCAAGGGGACCGG GCCGTGGCGGCGTTTCGTCCTGGAATATTCCATTCCTGGGGAGGGGGCGG GCGTGTCTGTTGACTTGACGGTGATGCATTCGCGGACTCCTTCGGGAAGG TTTTCTCGTTTGTTCGTTAATATTTTTTGTGTGTACGGCGTGACCCTTGA TAACGTGTCCACTTGGTGCGTTGTTGGTGGTATTGAGGCGTTGTTGTGAT GTTGCGCATCTCACCACGCGTTGGCGTATCACTAGAGTGGTCGAATCTAG TTAACAGGTACGACCGTGTCCCTCACGGCGTCAGGCTTACTTCCTGAGCA CCCTACAATCCTCCCAGTAGTAGACCCTTCCCCTTTCCGCCTTCCACCTT CCACCACCTTCCACCTTCCACATTACACATCAAACACATTCCACTGCTCT TGAGCACTGCGACGATGCACCGCTTCCTTTCGGCCGCCCATTTCATCCAG CTGACGATGGCCTTCGGGATCAGAAACGTCCCCGACCGACCTAAGGCCTT GAGAGAAATCAGGCGCATCATCGCAGCACCAGCGCCAGATTCGGGGGCAC AAGGGGCGACAGGGGAAGCTGACGGTGCGGGAGGACGAGCGTCTTCGTCT TCGGTTGTTGCGATTCTGGAGCTCCAGGACCCTGAGTCGGGCTTGCTGGC GACGGCTTCAAGGGCTTTTATAAAGTGCGTTGTTTTGGTATTGGCAACGC AGGAGCTAGCTTGCCTCGGGTAACCGTGCTGGTCCCACTTTTATGAGATT CTCGTCATGAGGTGGTGTGTGTCATCGTCATGATGCGGGGCGGTGCGTAA CGAGGACGTTTTTCTTTCATGGAGACATGGGTGTGGTAGTTACTTTTGAC CTTTTGACCAACTTTCCAACACTGTCGTCGTCATCGACTTCCCAACACTG TCGTCGTCATCTTTCCAACACTGTCGTCGTCATCTTTCCAACACTGTCGT CGTCATCGGCGTCGTCGGCGTAGTCGCATTGTTTCCTTAGTGCTGTATTA CCATGTGTTTCGCTGTAGGCGCGTACACTTTGTAAAAGGTAGGACGAGCC GCCGTTACCGTGAGAGTTGTACATTCTAAATGCCAATATACTCCCGGGTG GGACACAAACGTATCCTGCCGAAACCGAATCACCACCCTATCCGAATTCC CTCGGAGCCAATACTTGCTTGTCTCCGTGCTTTTCGCTCGTGTGCGGCAC CTGTCATGTTTTTTTGTATTGTTTCATTGCTCTTACAACATCGATGTTCG ATTGCTCTTGTATCGCTGTTCGATTGCTCTGATCGCTGTTCGGATGGTCT TGTCGCTGTTCGATTGCCCTTATCGCTGTTGAAATGGTCTTATCCCTGTT AAATTGGTCTTACCGCTGTTCGATTGTCCTTATCGCCGTTCGACTTCCCT CATCGCTGTTCGATTGCTATTTTCGCTGCTCTGTTGCCTGTGGGGGTATC TGTGCGTCTCGACAGATACGGGGCGCCCGTGTTGGGCTGGGTGATGAGTG GTAATGGCGCCGAGTACGGGCACTTGAAGAACTCCATCCTCAGATTCCCC TCCGTGTCGGAGTGGACAGCCCTCATGGAAGAGGCAGGCAAGATTTTTTC ACGTAGTCACGCTGGTGCACCGGGTGCTTTCCGGCTACAATCACTCTCTT TTTTCCTTTGTATTTAGCGCGGTGCTTGGGTTGAGTGTGGAGTCACGGGA CTGTCACGCTTTTAGTGCTCATACTTTGTTTTTCCTGAGCAGCTGTGCAA GAACGACCAACCTTTGCAAGCGCGGTTCGTAGGTGTTCCTCCCCTTTTAG CGTTCATGTCGCACATTTTTTTGCTTTGTCCCGCGAATATCACGACGATC GAATGGCATGCCCACGACTGCGACAGCGGGTTCAAGTCCTTGAAAGCACC CACTAATGATCTTTTGGGGATTTCTTTGTTGTTAGCACAGGTTGTGTTTT GTCAGTGTCGTCTTGCCTTCAGCTCGGTTGGCTGTACACGTTTTCTTTCA TACATATCCATGGTCTATTGGTCGCCCCCATGACCCCCCAATATCGTGAC TCTCCTGACGTGTACGGTACCCCCGACATTGACGTTGTTTTCAAATGGGA AAGAAGACGTTGGTCCCCCAATATTCTCATACATATGCGCACGACCTGCC CCCCCCCCCCCCCCCCCCCCCCCCCCTGCGCACGGCTTAGCAGGGCTGGA GGTTTTCTCCCACGAGACGATGGGGTTCGGGACGGTTCATCTCTACCTCG CAAGACCTCGACCCAACGTCCGGTAGAGGGCAGTTCTTCCTTCGTCGCCA AGTTGTAGCAAAAACGAGGCTGTGGCATAGTAAAAAGTAGTGCGTGGAGA AGAGGAACGAATATTTTTTGGCAATGAAAATCAGTTGGATATTCAGACGA ATCAGCAACTGGAAGGGTTGCAGTGAGGTTCTAGAGTGTTGATCTCTACC CTGCGCACAGGTGAATCAATGATGAACCCGCGTTTGAAACCATGGTCTGT TCGCAGTCAGCACGTGCACGTTTTCTGTGTGCACATCTTGAATATTGCGA CGGCAACGCTATCGCGACCTCGGCCGCATTTTTAGTGTGGGTGCTGCCCG TCCGAGGTTTTCGAGATGGACCTTACAACGAGTTGGCAGTAGCCTTGTGC ACTCCGAGACCCCGTCCATCCCTCTCATCCCCACGTGGGAGCGTACAACG CAGCGTGAACCATTTTTGAATATCTCTA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1289:9510..14587+

>mRNA_E-fasciculatus_F_contig1289.2179.1 ID=mRNA_E-fasciculatus_F_contig1289.2179.1|Name=mRNA_E-fasciculatus_F_contig1289.2179.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1914bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1289:9510..14587+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAGCCATGCGGTGCGACGTCTGCAGTGCTAACAGCGGTGGCCGCATG
CGTGGCGTACGCTGTCATATTTTTGGGTGGGCAGCAGCAGCGGTCGGGGT
CAGAGGGCGGCGGGGAGTATGAGCTCGGGTCGGGGAAGATGTTCGACTCC
ATTGCTCCTCGGTACGACCTCATCAACAAGATGAAGCCATGCGGTGCGAC
GTCTGCAGTGCTAACAGCGGTGGCCGCATGCGTGGCGTACGCTGTCATAT
TTTTGGGTGGGCAGCAGCAGCGGTCGGGGTCAGAGGGCGGCGGGGAGTAT
GAGCTCGGGTCGGGGAAGATGTTCGACTCCATTGCTCCTCGGTACGACCT
CATCAACAAGGTGATATCCCTTGGGTTGGACATGCAATGGCGAAGAGCTA
TGGTTCGAGGTCTCCAGGTGATATCCCTTGGGTTGGACATGCAATGGCGA
AGAGCTATGGTTCGAGGTCTCCAGCTGCGAGCTGGAGATAGAGTGGTAGA
CATGGCCACGGGGACGGCCGACGTCGCGATCATGGTCTCCGGAGAACTGG
CCAAGCTGGAGGGGGCCCCGGGCGACCGAGAAACGATCCCGGGAACGGTC
GAACCGGAGGTGGTCGGGATCGACCCTAGCGCGAGGATGCTAGAGCTGCG
AGCTGGAGATAGAGTGGTAGACATGGCCACGGGGACGGCCGACGTCGCGA
TCATGGTCTCCGGAGAACTGGCCAAGCTGGAGGGGGCCCCGGGCGACCGA
GAAACGATCCCGGGAACGGTCGAACCGGAGGTGGTCGGGATCGACCCTAG
CGCGAGGATGCTAGAGGTTGGGAGGGAGAAGGTTGCGGAGGCGGGGCTGT
CTTCTCGGGTGCGCCTTCAAATCGGGGACGCTCAAGATTTGGCGGATATT
GCGGACGGATCGGTGGACAAGGTTGGGAGGGAGAAGGTTGCGGAGGCGGG
GCTGTCTTCTCGGGTGCGCCTTCAAATCGGGGACGCTCAAGATTTGGCGG
ATATTGCGGACGGATCGGTGGACAAGCTGACGATGGCCTTCGGGATCAGA
AACGTCCCCGACCGACCTAAGGCCTTGAGAGAAATCAGGCGCATCATCGC
AGCACCAGCGCCAGATTCGGGGGCACAAGGGGCGACAGGGGAAGCTGACG
GTGCGGGAGGACGAGCGTCTTCGTCTTCGGTTGTTGCGATTCTGGAGCTC
CAGGACCCTGAGTCGGGCTTGCTGGCGACGGCTTCAAGGGCTTTTATAAA
CTGACGATGGCCTTCGGGATCAGAAACGTCCCCGACCGACCTAAGGCCTT
GAGAGAAATCAGGCGCATCATCGCAGCACCAGCGCCAGATTCGGGGGCAC
AAGGGGCGACAGGGGAAGCTGACGGTGCGGGAGGACGAGCGTCTTCGTCT
TCGGTTGTTGCGATTCTGGAGCTCCAGGACCCTGAGTCGGGCTTGCTGGC
GACGGCTTCAAGGGCTTTTATAAAATACGGGGCGCCCGTGTTGGGCTGGG
TGATGAGTGGTAATGGCGCCGAGTACGGGCACTTGAAGAACTCCATCCTC
AGATTCCCCTCCGTGTCGGAGTGGACAGCCCTCATGGAAGAGGCAGGCAA
GATTTTTTCACATACGGGGCGCCCGTGTTGGGCTGGGTGATGAGTGGTAA
TGGCGCCGAGTACGGGCACTTGAAGAACTCCATCCTCAGATTCCCCTCCG
TGTCGGAGTGGACAGCCCTCATGGAAGAGGCAGGCAAGATTTTTTCACGG
CTGGAGGTTTTCTCCCACGAGACGATGGGGTTCGGGACGGTTCATCTCTA
CCTCGCAAGACCTCGACCCAACGTCCGGTAGGGCTGGAGGTTTTCTCCCA
CGAGACGATGGGGTTCGGGACGGTTCATCTCTACCTCGCAAGACCTCGAC
CCAACGTCCGGTAG
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