mRNA_E-fasciculatus_F_contig12769.2105.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12769.2105.1
Unique NamemRNA_E-fasciculatus_F_contig12769.2105.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: D7FLS6_ECTSI (Polynucleotide kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLS6_ECTSI)

HSP 1 Score: 376 bits (965), Expect = 4.690e-125
Identity = 185/200 (92.50%), Postives = 194/200 (97.00%), Query Frame = 1
Query:    4 LKAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATNAG 603
            LKAKVRSVV+ALGIPVEAYLACRDDY RKPRPGCWEMVSTS+NGGLD EKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAK+PFQTPEQFFMRST+PLHKNRSLAMLGFDPSTL+G+ SGGSAESLSRREGDGGXXLEV   VGPPGGGKSTLCK+RLPDHARINQDELK+L+RCEREAGERLRGGRSVVIDATNAG
Sbjct:  349 LKAKVRSVVRALGIPVEAYLACRDDYCRKPRPGCWEMVSTSYNGGLDVEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKIPFQTPEQFFMRSTVPLHKNRSLAMLGFDPSTLLGKGSGGSAESLSRREGDGGXXLEVVVLVGPPGGGKSTLCKDRLPDHARINQDELKSLKRCEREAGERLRGGRSVVIDATNAG 548          
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: A0A7S2Y1Q1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1Q1_9STRA)

HSP 1 Score: 145 bits (365), Expect = 5.330e-41
Identity = 78/148 (52.70%), Postives = 94/148 (63.51%), Query Frame = 1
Query:  154 AACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
            A C YVGDAAGRP +G  KKDFSAGDLK ALN  + F TPE+FF+ ST  LH +R  A++GF PSTL    +G +      +E        V   VG P  GKST C++ L +H RINQD LKTL +C + A E L+ G SVVIDATN
Sbjct:    2 ADCFYVGDAAGRPAEGKRKKDFSAGDLKFALNLGIRFYTPEEFFLGSTQSLHCSRQKALMGFQPSTLQPTTTG-TVYFFQEQE--------VLVLVGSPASGKSTFCQQVLTEHTRINQDTLKTLAKCMKAAEEALKSGNSVVIDATN 140          
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: A0A1R2C5Y8_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C5Y8_9CILI)

HSP 1 Score: 140 bits (353), Expect = 2.160e-36
Identity = 75/198 (37.88%), Postives = 112/198 (56.57%), Query Frame = 1
Query:    4 LKAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
            ++ K+++VV+ALG+   A  A  DD +RKP  G W+  + + NGG++ + +   Y+GDAAGRP  G+ KKDF+  DLK ALN  +PF+TPE+FF      L +  ++   G DP  +  + SG + +  S          E    VG PG GKST  K  L ++ R+N D LK+ ++C +     L+  +S VID TN
Sbjct:  118 MQGKIKNVVEALGVNALAMAAYGDDEFRKPCTGMWDYFTKNLNGGINVDFSVSKYIGDAAGRPASGSRKKDFNDTDLKYALNIGIPFETPEKFF------LGERENIPQPGIDPRNI--KKSGAALKGESDNSNIAKSNTEAIIFVGSPGSGKSTFWKNYLSNYTRVNNDTLKSKEKCLKTMRASLQNNKSCVIDNTN 307          
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: A0A7S4PTE1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PTE1_9DINO)

HSP 1 Score: 140 bits (353), Expect = 2.530e-36
Identity = 79/198 (39.90%), Postives = 103/198 (52.02%), Query Frame = 1
Query:    4 LKAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
            ++ K+ ++ KA+G+P+ A L   DD +RKP P  W+++S+ FNGG+        Y GDAAGR      KKDFSA DLK ALN  VPF TPE+FF+       K        FDP TL           L R+         +   VGPPG GKS    + L    R+NQD LKT  +C +   E L  G+SVV+D  N
Sbjct:  131 IQQKIDAMQKAMGVPLLAMLMTCDDVFRKPLPASWKLMSSRFNGGVAVSVERSFYCGDAAGRVPPVVKKKDFSASDLKFALNVGVPFHTPEEFFLGKAQAYQKES----FPFDPRTLGKSTEAFPVPPLDRQA--------LVLCVGPPGSGKSFAATQHLAACTRVNQDILKTKDKCLKACKEALEAGKSVVVDNQN 316          
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: A0A0G4EWC3_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EWC3_VITBC)

HSP 1 Score: 134 bits (338), Expect = 1.860e-34
Identity = 79/200 (39.50%), Postives = 107/200 (53.50%), Query Frame = 1
Query:    4 LKAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFM--RSTLPLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
            L+ K+ +V  AL +P+  YLA RDD YRKP  G W+++ +  N G+  ++    +VGDAAGRP  G  KKDFS+ D K ALN  + F TPE+ F+   S  P           FDP TL GQ     +  + + E       EV   VG PG GKS+L ++  P +  +NQD LK   +C +E    L  G+S VID  N
Sbjct:   86 LQKKLDAVQAALAVPMLVYLATRDDIYRKPCTGSWDLMESEHNDGVKIDRKQSKFVGDAAGRPASGGRKKDFSSSDHKFALNLGIRFLTPEEAFLGQNSNFP-------TTFDFDPRTL-GQGLVPPSTVIKKVE-----DTEVVILVGAPGSGKSSLVRKLFPTYKHVNQDTLKDKNKCVKECKTALAAGQSAVIDNQN 272          
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: A0A7S1S7L6_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1S7L6_ALECA)

HSP 1 Score: 135 bits (341), Expect = 2.180e-34
Identity = 76/201 (37.81%), Postives = 106/201 (52.74%), Query Frame = 1
Query:    1 QLKAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFM--RSTLPLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
            +L  ++  + + LG P+    A   D +RKPR G W  +++  NGG+  + A C +VGDAAGR   G  KKDFS  DLK ALN  V FQTPE+ F+   +     +  S     FDP  L      G +     + G  G   E+   VGPPG GKS +     P +AR+NQD LKT ++C +   E L+ G+S ++D  N
Sbjct:  165 ELTDRIDKIQRDLGAPLLVLAALGSDGFRKPRTGSWRFLASELNGGVAPDVANCRFVGDAAGRAALGKVKKDFSDSDLKFALNVGVVFQTPEECFLGPEAAKATRRPYSTTSFAFDPRCL------GKSGGAKTKVGPSGKQ-ELIVVVGPPGSGKSAVTTSTFPSYARVNQDTLKTKEKCLKAVVEALKAGQSAIVDNQN 358          
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: A0A0G4EZI3_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4EZI3_9ALVE)

HSP 1 Score: 134 bits (337), Expect = 5.290e-34
Identity = 76/196 (38.78%), Postives = 103/196 (52.55%), Query Frame = 1
Query:   13 KVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDPSTL-VGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
            ++  VVKAL +P++ + A  DD YRKP PG + ++ T   G  D +K    Y GDAAGRP  G+ KKD S  DLK ALN  V F+TPE+  + +    +   +     FDP  +  G       E+    E       E+   VGPPG GKS         +AR+NQD LKT ++C + A E L  G+SVV+D  N
Sbjct:  120 RIEGVVKALDVPIQVFAATGDDMYRKPAPGLFNLMKTVNGGAWDLDKQTSFYCGDAAGRPAGGSRKKDHSDSDLKFALNWGVGFKTPEEALLGANKATNVPSTFT---FDPRQMGKGNQVQAGKENKQAAEIGPSDKQELILVVGPPGSGKSFFATRTFSSYARVNQDTLKTKEKCLKTAKEALEKGKSVVVDNQN 312          
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: F4RVC5_MELLP (Uncharacterized protein n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4RVC5_MELLP)

HSP 1 Score: 134 bits (337), Expect = 7.880e-34
Identity = 79/212 (37.26%), Postives = 112/212 (52.83%), Query Frame = 1
Query:   13 KVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDP--------------STLVGQASGGSAESLSRREGDG-GXXLEVXXXVGPPGGGKSTLCKERLPD--HARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
            K+  + KAL +P   + A +DD YRKPR G WE    ++NG L+ +K    YVGDAAGRP +G+ K DFS  D K ALN  +PF TPE+FF+  +    K +   + GFDP              S +  +    S E++ + + +     LE+   VGPP  GKS   K       +  INQD+LKT ++C +   E ++  +S VID TN
Sbjct:  134 KLPKLAKALNVPFRIFAARKDDVYRKPRTGIWEEFIKNWNGNLEPDKEQSFYVGDAAGRPSRGSIKADFSDTDRKWALNLDIPFFTPEEFFLNQS----KRQDYVLKGFDPTKYDHDQPAWIPETSIIAYEPISSSLENVKKLQSNEIPKKLEIVLFVGPPAIGKSQFYKTHFEPKGYEHINQDKLKTFEKCLKSVKESIQCSKSCVIDNTN 341          
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: A0A1D1W9M1_RAMVA (Uncharacterized protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1W9M1_RAMVA)

HSP 1 Score: 131 bits (330), Expect = 6.870e-33
Identity = 79/208 (37.98%), Postives = 113/208 (54.33%), Query Frame = 1
Query:    7 KAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTH-KKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDPSTLVGQASGG--------SAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERL--PDHARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
            + KV S +  +GIP++ + A     YRKP PG W+    ++N G+  +    +YVGDAAGRP  G   KKDF+A D   ALNAK+PF+TPE++F+       K     +  FD    + +A  G        +A   S+ +       E+   VGPPG GKS   K+ L   ++  IN+D L+T Q+C  EA ++L  G+SVVID TN
Sbjct:  138 RQKVDSFLAKVGIPIQIFCASGGGQYRKPAPGMWDFFVQNYNEGVAVDMENSVYVGDAAGRPNSGGKGKKDFAATDRLFALNAKLPFKTPEEYFLDK-----KPEKYELTAFDARRYLEEARAGKVTLVSPPTAALFSQAQ-------ELVLLVGPPGIGKSHFVKQHLLPKEYVHINRDTLRTWQKCVAEADKQLAAGKSVVIDNTN 333          
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: UPI001E1DE040 (bifunctional polynucleotide phosphatase/kinase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE040)

HSP 1 Score: 130 bits (327), Expect = 1.400e-32
Identity = 77/203 (37.93%), Postives = 110/203 (54.19%), Query Frame = 1
Query:    1 QLKAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTH--KKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARI--NQDELKTLQRCEREAGERLRGGRSVVIDATN 597
            +L+ K+ +++KAL IPV A++   ++ YRKP    WE   +  N G+  +++ CLYVGDAAGR K+      KDFS  D K A N  V FQTPE+FF+  +         A    DP+T++G+ +    E  S+         E+   VG P  GKST  K     H  I  N+D + T+Q+C + A E L+ G+SVV D TN
Sbjct:  126 ELQRKIEAIIKALDIPVLAFVCTGENQYRKPSTMMWEYWESKCNQGVKVDRSKCLYVGDAAGRAKEWASGKPKDFSCSDRKFAANLGVKFQTPEEFFLGES-----PAKFAWQTVDPTTVLGKVAAEKKEYHSKSP-------EMVIMVGAPATGKSTFRKRYFEPHGYIAVNRDTMGTMQKCVKAATEALKAGKSVVADNTN 316          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLS6_ECTSI4.690e-12592.50Polynucleotide kinase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A7S2Y1Q1_9STRA5.330e-4152.70Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A1R2C5Y8_9CILI2.160e-3637.88Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A7S4PTE1_9DINO2.530e-3639.90Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A0G4EWC3_VITBC1.860e-3439.50Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S1S7L6_ALECA2.180e-3437.81Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A0G4EZI3_9ALVE5.290e-3438.78Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
F4RVC5_MELLP7.880e-3437.26Uncharacterized protein n=1 Tax=Melampsora larici-... [more]
A0A1D1W9M1_RAMVA6.870e-3337.98Uncharacterized protein n=1 Tax=Ramazzottius varie... [more]
UPI001E1DE0401.400e-3237.93bifunctional polynucleotide phosphatase/kinase-lik... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12769contigE-fasciculatus_F_contig12769:584..3818 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score375.9
Seed ortholog evalue1.1e-101
Seed eggNOG ortholog2880.D7FLS6
KEGG koko:K08073
EggNOG free text desc.DNA-3'-diphospho-5'-guanosine diphosphatase
EggNOG OGsCOG0241@1,KOG2134@2759
EC2.7.1.78,3.1.3.32
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03400
Hectar predicted targeting categoryother localisation
Exons5
Model size603
Cds size603
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12769.2105.1prot_E-fasciculatus_F_contig12769.2105.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12769 584..3818 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927783.337031-CDS-E-fasciculatus_F_contig12769:583..6731622927783.337031-CDS-E-fasciculatus_F_contig12769:583..673Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12769 584..673 +
1695995692.3397937-CDS-E-fasciculatus_F_contig12769:583..6731695995692.3397937-CDS-E-fasciculatus_F_contig12769:583..673Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12769 584..673 +
1622927783.350607-CDS-E-fasciculatus_F_contig12769:1311..14341622927783.350607-CDS-E-fasciculatus_F_contig12769:1311..1434Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12769 1312..1434 +
1695995692.3580563-CDS-E-fasciculatus_F_contig12769:1311..14341695995692.3580563-CDS-E-fasciculatus_F_contig12769:1311..1434Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12769 1312..1434 +
1622927783.3604195-CDS-E-fasciculatus_F_contig12769:2182..22861622927783.3604195-CDS-E-fasciculatus_F_contig12769:2182..2286Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12769 2183..2286 +
1695995692.369719-CDS-E-fasciculatus_F_contig12769:2182..22861695995692.369719-CDS-E-fasciculatus_F_contig12769:2182..2286Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12769 2183..2286 +
1622927783.3729258-CDS-E-fasciculatus_F_contig12769:3109..32921622927783.3729258-CDS-E-fasciculatus_F_contig12769:3109..3292Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12769 3110..3292 +
1695995692.3806772-CDS-E-fasciculatus_F_contig12769:3109..32921695995692.3806772-CDS-E-fasciculatus_F_contig12769:3109..3292Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12769 3110..3292 +
1622927783.38249-CDS-E-fasciculatus_F_contig12769:3715..38181622927783.38249-CDS-E-fasciculatus_F_contig12769:3715..3818Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12769 3716..3818 +
1695995692.3957372-CDS-E-fasciculatus_F_contig12769:3715..38181695995692.3957372-CDS-E-fasciculatus_F_contig12769:3715..3818Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12769 3716..3818 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12769.2105.1

>prot_E-fasciculatus_F_contig12769.2105.1 ID=prot_E-fasciculatus_F_contig12769.2105.1|Name=mRNA_E-fasciculatus_F_contig12769.2105.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=201bp
QLKAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAE
KAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFMRSTL
PLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGGGLEVVVLVGPP
GGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATNA
G
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mRNA from alignment at E-fasciculatus_F_contig12769:584..3818+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12769.2105.1 ID=mRNA_E-fasciculatus_F_contig12769.2105.1|Name=mRNA_E-fasciculatus_F_contig12769.2105.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3235bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12769:584..3818+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGCTAAAGGCGAAGGTTCGGTCCGTGGTGAAGGCTCTAGGCATCCCCGT TGAGGCCTACCTGGCTTGCCGTGACGACTACTACAGAAAGGTACAGAAAG CAGAAAGGTGTCGGCTTGCATCCCGCTGCTGCTGCTCCTCCTGCTGTTGT GAGCTTGGAAGGCTGTATTGTTCGTTCTTTGTACCTCTTTGAGATGTTGC TGTGTAGAGCCTTCCTGCAACACAACGCGTGATCTCGTGGTGGCGATCGG AAAGGGTGCAGGAGGAGTGTTTGCACAGCTGAGTCTTTCCCCCGCAGGAA AAAGCACTCCATGCGTTTAGAATATGGTAGTACGTTTGTGCGATATTGCC ATGCGGTATTGCCATGCGGTATTGCCATGCGGTATTGCCATGCGGTATTG CCAACCCAACCCTGATGATGATGATGATGATGATGCGGAAGCTCGACGGA AACGCTCCGTTGCTTTCGTTGCTGTCGTACGCAAAAGGGTACGCTCCGTC AGAAACCCTTGTGGTAAGGTAAGAACCGAACCCTTTTCCATCACCAACAC ACCATCACCAACACACCAAGCCCTCTCACATCGACACGGCAAATCAAAGC GTAGCTCAGCGTAGGATAGGATACCATATGATGATGCTTCTCAGGCAAAA AACGGTTACAGTACTCCCAGCGCATGCATGTCTTCGACACCCCGTGTCAT CTCGCTGACTTTTTTTTTTTTTTGGCAGCCTCGTCCCGGGTGCTGGGAGA TGGTGTCGACCTCCTTCAACGGGGGTTTGGACGCGGAAAAGGCGGCGTGC TTGTACGTCGGGGACGCCGCGGGCAGGCCCAAGCAGGGGACCCACAAGAA GGTGAGAAACCGGCAATACGGGTTTCCACGCCACATATTGTGGCGAAACC ACGAAAGGTTGAGGTTTTCCACGTCTATCTAATGGTATACTAGGGAAAAC CGCCTAAGGTGTTCACGCCAGATAGTGTGGCGAAATCACGGAACGTTTTC CACATGTAGTGGTCAGCGAAACCGCCTAAGGTTTCCTTCCACCTCTAATA CCTGTAGAATAATACCTCCAATGGATAGCACAACCGCCGGTGGTTTCCAC GCCAACAAAATGGCGAAACTGCCGAAATTTTCCACACCAGATAACGTGGC AATACCACCAAGGATTTTCTCATCTAATGGTATGCTGTACTAGGCGAAAC CACCCAGGGTTTTGCACGTACCGGTGTATCGGAATGAGATAACTTCTGTT GTTTCAACGACGAAGAAGTGAAGAAAAAGTGGTGAAACCGACAACGGTTT GCATCCCAAATGAATGGCGGAAACCGCGAAAGGTTTCCACGCCAAATATG GTGGCGAAACCACCTACTTGTGGGGTTTGCACACCCAACGGTAGGTTGCC AAACAGCAAACCACCAACAAGGTATTGGATTGAGAGAACCGCCGATGCTT TTGGCAGCATCTCAGACGCGCTCTGGGACACGTTGGTGGCGGGATCGTTA CCGTTAAATCGCGTCGTAACGGCTTTTGTCGCGTTTGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTCTCGATCTCGAACTTCTTCCCAGG ATTTTTCGGCGGGCGACTTGAAGCTGGCGCTGAATGCCAAGGTCCCCTTC CAGACCCCCGAGCAGTTCTTCATGCGCTCCACCCTACCCCTCCACAAGAA CAGGTACTATACTATACTATACTATACTATACTATACTATACTATACTGT ACTGTACTGAATGCTGTAGCCACGACCCGACAACCATACTGTACTGTACT GAATGCTGTAGCCACGACCCGACAACCATGAGGTGCATGACGGAAGATAC CATACCCCCTCGACCGTTCTTCGAAGACCGTTCTTCGAAGACCGTTCTTC GAAGACCGTTCTTCGAAGCTCGATTACCCCGCAGTACAGCAAAACCAGTG CGTGGCGGTGCCGAACATGGTGCCGAAACCTGGATGATCCGTCTCGTGGA GAGAGAGCTAGAGCTACTGTAGACTATCCGAAAACGGATCGTTTGCTTCT AGGCATCCTGTACGCCGTGGAATAATGAGCTTTGGAAATCCGTCCAGGCG GGTGTGGTAGGTATCTTTATGCAACCTACGGTATTTAGAGTCGACTCGAT TCGAACGGCTTTCGCCAGCGGTTGGTTGAAACAGGAACAAGAACTGATGG ACTAGTACAATACCACTTCCCCCGGCAGATTCGTCGGAACAGCGGCGCGA CGTGTGCCGTTTCGTCTTTCTTGGCACCAAGGCGCTCCGCGAAATCGATC AACAGCGGTACAATAGTCCCAACGCTACAGTACCCGCCCGGCCTCACAAA CGACCCAAACCAGACCAGTAAATCTCGCCGCGTCGCTGTAATTCTCGGGG TACTAGTACCCTCGATGGAGGTCGTCCTTCACCGTCACTGTAAACGTCAG TGTCTCGCGCCCCCGCTGAATCTCAAAATCGTTTCTGTGCCTGTGCTTGT GGGGCGGCTGGCTGAGTGTTGTGCAGGTCTTTGGCGATGTTGGGCTTCGA CCCTTCCACCCTTGTAGGACAAGCTTCGGGGGGCTCCGCAGAAAGCCTTT CGCGGCGTGAGGGAGACGGGGGGGGTGGGTTGGAGGTGGTGGTGTTGGTG GGCCCTCCCGGCGGGGGAAAGAGCACGCTGTGCAAGGAGAGGCTGCCAGA TCACGCCAGGTGAAAAGTGATGGAGACACGTTCGTGTTGTCCCCTCAAAA CACTCTTTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGAGAGTTAGATGGAAAAGAGGGCTCTGATCCCTCAGATGTTCAGA GCAATGGTGGTAGTGGACAATGAGTTAGTTACCCGGATGACCGTGATGAA GATGAAGGTACAGCAATACATGTAGACATCTCCAGAGCGCAAAGCGAAGT CGAACAGAAGGCAACCGGGGGGGAAAAAACATGGGAGAACGAGATGATGC CGCAACCATGCTGTGGTTACCTACAGTATCTAACGTGTCCTTTATTCCTG TGTGCCCCTTTGCTTATCTACGTTAGCTAACGTGTCGTTTATTCCTGTCT GTCCCTTTGTTTCGTTTTCTTTGCGTTGGAAGGATCAACCAGGATGAGCT CAAAACCCTCCAGCGGTGCGAGCGAGAGGCTGGGGAGCGGCTGAGGGGAG GGCGGAGTGTTGTGATCGATGCTACGAACGCGGGG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12769:584..3818+

>mRNA_E-fasciculatus_F_contig12769.2105.1 ID=mRNA_E-fasciculatus_F_contig12769.2105.1|Name=mRNA_E-fasciculatus_F_contig12769.2105.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1206bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12769:584..3818+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGCTAAAGGCGAAGGTTCGGTCCGTGGTGAAGGCTCTAGGCATCCCCGT
TGAGGCCTACCTGGCTTGCCGTGACGACTACTACAGAAAGCAGCTAAAGG
CGAAGGTTCGGTCCGTGGTGAAGGCTCTAGGCATCCCCGTTGAGGCCTAC
CTGGCTTGCCGTGACGACTACTACAGAAAGCCTCGTCCCGGGTGCTGGGA
GATGGTGTCGACCTCCTTCAACGGGGGTTTGGACGCGGAAAAGGCGGCGT
GCTTGTACGTCGGGGACGCCGCGGGCAGGCCCAAGCAGGGGACCCACAAG
AAGCCTCGTCCCGGGTGCTGGGAGATGGTGTCGACCTCCTTCAACGGGGG
TTTGGACGCGGAAAAGGCGGCGTGCTTGTACGTCGGGGACGCCGCGGGCA
GGCCCAAGCAGGGGACCCACAAGAAGGATTTTTCGGCGGGCGACTTGAAG
CTGGCGCTGAATGCCAAGGTCCCCTTCCAGACCCCCGAGCAGTTCTTCAT
GCGCTCCACCCTACCCCTCCACAAGAACAGGATTTTTCGGCGGGCGACTT
GAAGCTGGCGCTGAATGCCAAGGTCCCCTTCCAGACCCCCGAGCAGTTCT
TCATGCGCTCCACCCTACCCCTCCACAAGAACAGGTCTTTGGCGATGTTG
GGCTTCGACCCTTCCACCCTTGTAGGACAAGCTTCGGGGGGCTCCGCAGA
AAGCCTTTCGCGGCGTGAGGGAGACGGGGGGGGTGGGTTGGAGGTGGTGG
TGTTGGTGGGCCCTCCCGGCGGGGGAAAGAGCACGCTGTGCAAGGAGAGG
CTGCCAGATCACGCCAGGTCTTTGGCGATGTTGGGCTTCGACCCTTCCAC
CCTTGTAGGACAAGCTTCGGGGGGCTCCGCAGAAAGCCTTTCGCGGCGTG
AGGGAGACGGGGGGGGTGGGTTGGAGGTGGTGGTGTTGGTGGGCCCTCCC
GGCGGGGGAAAGAGCACGCTGTGCAAGGAGAGGCTGCCAGATCACGCCAG
GATCAACCAGGATGAGCTCAAAACCCTCCAGCGGTGCGAGCGAGAGGCTG
GGGAGCGGCTGAGGGGAGGGCGGAGTGTTGTGATCGATGCTACGAACGCG
GGGGATCAACCAGGATGAGCTCAAAACCCTCCAGCGGTGCGAGCGAGAGG
CTGGGGAGCGGCTGAGGGGAGGGCGGAGTGTTGTGATCGATGCTACGAAC
GCGGGG
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