mRNA_E-fasciculatus_F_contig12769.2105.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: D7FLS6_ECTSI (Polynucleotide kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLS6_ECTSI) HSP 1 Score: 376 bits (965), Expect = 4.690e-125 Identity = 185/200 (92.50%), Postives = 194/200 (97.00%), Query Frame = 1
Query: 4 LKAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATNAG 603
LKAKVRSVV+ALGIPVEAYLACRDDY RKPRPGCWEMVSTS+NGGLD EKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAK+PFQTPEQFFMRST+PLHKNRSLAMLGFDPSTL+G+ SGGSAESLSRREGDGGXXLEV VGPPGGGKSTLCK+RLPDHARINQDELK+L+RCEREAGERLRGGRSVVIDATNAG
Sbjct: 349 LKAKVRSVVRALGIPVEAYLACRDDYCRKPRPGCWEMVSTSYNGGLDVEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKIPFQTPEQFFMRSTVPLHKNRSLAMLGFDPSTLLGKGSGGSAESLSRREGDGGXXLEVVVLVGPPGGGKSTLCKDRLPDHARINQDELKSLKRCEREAGERLRGGRSVVIDATNAG 548
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: A0A7S2Y1Q1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1Q1_9STRA) HSP 1 Score: 145 bits (365), Expect = 5.330e-41 Identity = 78/148 (52.70%), Postives = 94/148 (63.51%), Query Frame = 1
Query: 154 AACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
A C YVGDAAGRP +G KKDFSAGDLK ALN + F TPE+FF+ ST LH +R A++GF PSTL +G + +E V VG P GKST C++ L +H RINQD LKTL +C + A E L+ G SVVIDATN
Sbjct: 2 ADCFYVGDAAGRPAEGKRKKDFSAGDLKFALNLGIRFYTPEEFFLGSTQSLHCSRQKALMGFQPSTLQPTTTG-TVYFFQEQE--------VLVLVGSPASGKSTFCQQVLTEHTRINQDTLKTLAKCMKAAEEALKSGNSVVIDATN 140
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: A0A1R2C5Y8_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C5Y8_9CILI) HSP 1 Score: 140 bits (353), Expect = 2.160e-36 Identity = 75/198 (37.88%), Postives = 112/198 (56.57%), Query Frame = 1
Query: 4 LKAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
++ K+++VV+ALG+ A A DD +RKP G W+ + + NGG++ + + Y+GDAAGRP G+ KKDF+ DLK ALN +PF+TPE+FF L + ++ G DP + + SG + + S E VG PG GKST K L ++ R+N D LK+ ++C + L+ +S VID TN
Sbjct: 118 MQGKIKNVVEALGVNALAMAAYGDDEFRKPCTGMWDYFTKNLNGGINVDFSVSKYIGDAAGRPASGSRKKDFNDTDLKYALNIGIPFETPEKFF------LGERENIPQPGIDPRNI--KKSGAALKGESDNSNIAKSNTEAIIFVGSPGSGKSTFWKNYLSNYTRVNNDTLKSKEKCLKTMRASLQNNKSCVIDNTN 307
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: A0A7S4PTE1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PTE1_9DINO) HSP 1 Score: 140 bits (353), Expect = 2.530e-36 Identity = 79/198 (39.90%), Postives = 103/198 (52.02%), Query Frame = 1
Query: 4 LKAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
++ K+ ++ KA+G+P+ A L DD +RKP P W+++S+ FNGG+ Y GDAAGR KKDFSA DLK ALN VPF TPE+FF+ K FDP TL L R+ + VGPPG GKS + L R+NQD LKT +C + E L G+SVV+D N
Sbjct: 131 IQQKIDAMQKAMGVPLLAMLMTCDDVFRKPLPASWKLMSSRFNGGVAVSVERSFYCGDAAGRVPPVVKKKDFSASDLKFALNVGVPFHTPEEFFLGKAQAYQKES----FPFDPRTLGKSTEAFPVPPLDRQA--------LVLCVGPPGSGKSFAATQHLAACTRVNQDILKTKDKCLKACKEALEAGKSVVVDNQN 316
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: A0A0G4EWC3_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EWC3_VITBC) HSP 1 Score: 134 bits (338), Expect = 1.860e-34 Identity = 79/200 (39.50%), Postives = 107/200 (53.50%), Query Frame = 1
Query: 4 LKAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFM--RSTLPLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
L+ K+ +V AL +P+ YLA RDD YRKP G W+++ + N G+ ++ +VGDAAGRP G KKDFS+ D K ALN + F TPE+ F+ S P FDP TL GQ + + + E EV VG PG GKS+L ++ P + +NQD LK +C +E L G+S VID N
Sbjct: 86 LQKKLDAVQAALAVPMLVYLATRDDIYRKPCTGSWDLMESEHNDGVKIDRKQSKFVGDAAGRPASGGRKKDFSSSDHKFALNLGIRFLTPEEAFLGQNSNFP-------TTFDFDPRTL-GQGLVPPSTVIKKVE-----DTEVVILVGAPGSGKSSLVRKLFPTYKHVNQDTLKDKNKCVKECKTALAAGQSAVIDNQN 272
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: A0A7S1S7L6_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1S7L6_ALECA) HSP 1 Score: 135 bits (341), Expect = 2.180e-34 Identity = 76/201 (37.81%), Postives = 106/201 (52.74%), Query Frame = 1
Query: 1 QLKAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFM--RSTLPLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
+L ++ + + LG P+ A D +RKPR G W +++ NGG+ + A C +VGDAAGR G KKDFS DLK ALN V FQTPE+ F+ + + S FDP L G + + G G E+ VGPPG GKS + P +AR+NQD LKT ++C + E L+ G+S ++D N
Sbjct: 165 ELTDRIDKIQRDLGAPLLVLAALGSDGFRKPRTGSWRFLASELNGGVAPDVANCRFVGDAAGRAALGKVKKDFSDSDLKFALNVGVVFQTPEECFLGPEAAKATRRPYSTTSFAFDPRCL------GKSGGAKTKVGPSGKQ-ELIVVVGPPGSGKSAVTTSTFPSYARVNQDTLKTKEKCLKAVVEALKAGQSAIVDNQN 358
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: A0A0G4EZI3_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4EZI3_9ALVE) HSP 1 Score: 134 bits (337), Expect = 5.290e-34 Identity = 76/196 (38.78%), Postives = 103/196 (52.55%), Query Frame = 1
Query: 13 KVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDPSTL-VGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
++ VVKAL +P++ + A DD YRKP PG + ++ T G D +K Y GDAAGRP G+ KKD S DLK ALN V F+TPE+ + + + + FDP + G E+ E E+ VGPPG GKS +AR+NQD LKT ++C + A E L G+SVV+D N
Sbjct: 120 RIEGVVKALDVPIQVFAATGDDMYRKPAPGLFNLMKTVNGGAWDLDKQTSFYCGDAAGRPAGGSRKKDHSDSDLKFALNWGVGFKTPEEALLGANKATNVPSTFT---FDPRQMGKGNQVQAGKENKQAAEIGPSDKQELILVVGPPGSGKSFFATRTFSSYARVNQDTLKTKEKCLKTAKEALEKGKSVVVDNQN 312
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: F4RVC5_MELLP (Uncharacterized protein n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4RVC5_MELLP) HSP 1 Score: 134 bits (337), Expect = 7.880e-34 Identity = 79/212 (37.26%), Postives = 112/212 (52.83%), Query Frame = 1
Query: 13 KVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDP--------------STLVGQASGGSAESLSRREGDG-GXXLEVXXXVGPPGGGKSTLCKERLPD--HARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
K+ + KAL +P + A +DD YRKPR G WE ++NG L+ +K YVGDAAGRP +G+ K DFS D K ALN +PF TPE+FF+ + K + + GFDP S + + S E++ + + + LE+ VGPP GKS K + INQD+LKT ++C + E ++ +S VID TN
Sbjct: 134 KLPKLAKALNVPFRIFAARKDDVYRKPRTGIWEEFIKNWNGNLEPDKEQSFYVGDAAGRPSRGSIKADFSDTDRKWALNLDIPFFTPEEFFLNQS----KRQDYVLKGFDPTKYDHDQPAWIPETSIIAYEPISSSLENVKKLQSNEIPKKLEIVLFVGPPAIGKSQFYKTHFEPKGYEHINQDKLKTFEKCLKSVKESIQCSKSCVIDNTN 341
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: A0A1D1W9M1_RAMVA (Uncharacterized protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1W9M1_RAMVA) HSP 1 Score: 131 bits (330), Expect = 6.870e-33 Identity = 79/208 (37.98%), Postives = 113/208 (54.33%), Query Frame = 1
Query: 7 KAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTH-KKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDPSTLVGQASGG--------SAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERL--PDHARINQDELKTLQRCEREAGERLRGGRSVVIDATN 597
+ KV S + +GIP++ + A YRKP PG W+ ++N G+ + +YVGDAAGRP G KKDF+A D ALNAK+PF+TPE++F+ K + FD + +A G +A S+ + E+ VGPPG GKS K+ L ++ IN+D L+T Q+C EA ++L G+SVVID TN
Sbjct: 138 RQKVDSFLAKVGIPIQIFCASGGGQYRKPAPGMWDFFVQNYNEGVAVDMENSVYVGDAAGRPNSGGKGKKDFAATDRLFALNAKLPFKTPEEYFLDK-----KPEKYELTAFDARRYLEEARAGKVTLVSPPTAALFSQAQ-------ELVLLVGPPGIGKSHFVKQHLLPKEYVHINRDTLRTWQKCVAEADKQLAAGKSVVIDNTN 333
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Match: UPI001E1DE040 (bifunctional polynucleotide phosphatase/kinase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE040) HSP 1 Score: 130 bits (327), Expect = 1.400e-32 Identity = 77/203 (37.93%), Postives = 110/203 (54.19%), Query Frame = 1
Query: 1 QLKAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEKAACLYVGDAAGRPKQGTH--KKDFSAGDLKLALNAKVPFQTPEQFFMRSTLPLHKNRSLAMLGFDPSTLVGQASGGSAESLSRREGDGGXXLEVXXXVGPPGGGKSTLCKERLPDHARI--NQDELKTLQRCEREAGERLRGGRSVVIDATN 597
+L+ K+ +++KAL IPV A++ ++ YRKP WE + N G+ +++ CLYVGDAAGR K+ KDFS D K A N V FQTPE+FF+ + A DP+T++G+ + E S+ E+ VG P GKST K H I N+D + T+Q+C + A E L+ G+SVV D TN
Sbjct: 126 ELQRKIEAIIKALDIPVLAFVCTGENQYRKPSTMMWEYWESKCNQGVKVDRSKCLYVGDAAGRAKEWASGKPKDFSCSDRKFAANLGVKFQTPEEFFLGES-----PAKFAWQTVDPTTVLGKVAAEKKEYHSKSP-------EMVIMVGAPATGKSTFRKRYFEPHGYIAVNRDTMGTMQKCVKAATEALKAGKSVVADNTN 316 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12769.2105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12769.2105.1 >prot_E-fasciculatus_F_contig12769.2105.1 ID=prot_E-fasciculatus_F_contig12769.2105.1|Name=mRNA_E-fasciculatus_F_contig12769.2105.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=201bp QLKAKVRSVVKALGIPVEAYLACRDDYYRKPRPGCWEMVSTSFNGGLDAEback to top mRNA from alignment at E-fasciculatus_F_contig12769:584..3818+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12769.2105.1 ID=mRNA_E-fasciculatus_F_contig12769.2105.1|Name=mRNA_E-fasciculatus_F_contig12769.2105.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3235bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12769:584..3818+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12769:584..3818+ >mRNA_E-fasciculatus_F_contig12769.2105.1 ID=mRNA_E-fasciculatus_F_contig12769.2105.1|Name=mRNA_E-fasciculatus_F_contig12769.2105.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1206bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12769:584..3818+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |