prot_E-fasciculatus_F_contig12750.2094.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12750.2094.1
Unique Nameprot_E-fasciculatus_F_contig12750.2094.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length100
Homology
BLAST of mRNA_E-fasciculatus_F_contig12750.2094.1 vs. uniprot
Match: A0A6H5KSL6_9PHAE (V-SNARE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL6_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 2.970e-49
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0
Query:    7 SRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYVVIALLSAAIVFVLYLKIRRRSLL 99
            SRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLY VIALLSAAIVFVLYLKIRRRSLL
Sbjct:  152 SRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRRSLL 244          
BLAST of mRNA_E-fasciculatus_F_contig12750.2094.1 vs. uniprot
Match: A0A835ZAL4_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL4_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 5.680e-20
Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 0
Query:    4 ICRSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYVVIALLSAAIVFVLYLKIRR 95
            + R+ +SL DSRRVL ETE +G  V+ DLE QR+SLLR+R + R+      +AR +L +I+RR+ RHRL LY +IA L  AI FVLYLK RR
Sbjct:  137 LARTAISLTDSRRVLAETEDVGARVVTDLEGQRQSLLRARDNAREISYDTVEAREVLRAIARRDARHRLALYAIIAALLCAIAFVLYLKFRR 228          
BLAST of mRNA_E-fasciculatus_F_contig12750.2094.1 vs. uniprot
Match: A0A484E001_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E001_BRELC)

HSP 1 Score: 71.2 bits (173), Expect = 9.250e-13
Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 0
Query:    1 TKKICRSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYVVIALLSAAIVFVLYLKIRRRS 97
            T ++ +S + L+D+ R++ ETE +G  V+  L SQRE LL S   VR+TGA   +ARRLL  ++RR L + + LY  I +L  AI +VLY    R S
Sbjct:  154 TDRLTQSSMKLEDTHRIVAETEEVGIAVLDTLASQRERLLESHDKVRETGAMLTEARRLLQRMTRRILTNTIVLYTTIFILGVAICYVLYADFIRTS 250          
BLAST of mRNA_E-fasciculatus_F_contig12750.2094.1 vs. uniprot
Match: A0A425D3Z1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425D3Z1_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.640e-12
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 0
Query:   11 LQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYVVIALLSAAIVFVLYLKIRRRS 97
            L+ S+R+++ETE IG  VM  L  QRE+LL +   V+DT   AG ARR+L  +S+R L H+L L+ VI +L  AI  V Y    RR+
Sbjct:   45 LEQSKRIVQETEHIGISVMDTLAQQRETLLSAHDKVKDTRETAGDARRVLQRMSQRVLTHKLTLWFVIVVLVVAIALVFYHNFIRRA 131          
BLAST of mRNA_E-fasciculatus_F_contig12750.2094.1 vs. uniprot
Match: A0A024TJZ2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJZ2_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.670e-12
Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = 0
Query:    1 TKKICRSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYVVIALLSAAIVFVLYLKIRRRS 97
            T ++ R+   L+ S+R+++ETE IG  VM  L  QRE+LL +   V+DT   AG ARR+L  +S+R L H+L L+ VI +L  AIV V Y    +RS
Sbjct:  126 TDRLQRASDQLEQSKRIVQETEQIGISVMDTLAQQRETLLSAHDKVKDTRETAGDARRVLQRMSQRMLTHKLTLWFVILVLIVAIVLVFYHDFIKRS 222          
BLAST of mRNA_E-fasciculatus_F_contig12750.2094.1 vs. uniprot
Match: W4GBV3_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GBV3_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.690e-12
Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 0
Query:    1 TKKICRSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYVVIALLSAAIVFVLYLKIRRRS 97
            T ++ R+   L+ S+R+++ETE IG  VM  L  QRE+LL +   V+DT   AG ARR+L  +S+R L H+L L+ VI +L  AI  V Y    RR+
Sbjct:  127 TDRLQRAXXXLEQSKRIVQETEHIGISVMDTLAQQRETLLSAHDKVKDTRETAGDARRVLQRMSQRVLTHKLTLWFVIVVLVVAIALVFYHNFIRRA 223          
BLAST of mRNA_E-fasciculatus_F_contig12750.2094.1 vs. uniprot
Match: A0A485K772_9STRA (Aste57867_208 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K772_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 8.930e-12
Identity = 40/90 (44.44%), Postives = 59/90 (65.56%), Query Frame = 0
Query:    1 TKKICRSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYVVIALLSAAIVFVLY 90
            T ++ R+   L+ S+R+++ETE IG  VM  L  QRE+LL +   V+DT   AG ARR+L  +++R L H+L L+ VI +L AAI+ V Y
Sbjct:  123 TGRLQRASDQLEQSKRIVQETEQIGISVMDTLAQQRETLLSAHEKVKDTRETAGDARRVLQRMTQRVLTHKLTLWFVIVVLVAAILLVFY 212          
BLAST of mRNA_E-fasciculatus_F_contig12750.2094.1 vs. uniprot
Match: A0A662Y3N4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y3N4_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.280e-11
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    5 CRSRLS--LQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYVVIALLSAAIVFVLY 90
            CR R S  L+DS R++ ETE +G  V+  L  QRESLL +   VR+TGA   +ARR+L  ++RR + + + LY VI +L  AI +V+Y
Sbjct:  142 CRQRSSKTLEDSHRLVTETEEVGISVLDSLAQQRESLLGAHEKVRETGAMTTEARRILQRMTRRIITNTIVLYTVIFVLIVAICYVIY 229          
BLAST of mRNA_E-fasciculatus_F_contig12750.2094.1 vs. uniprot
Match: H3HAR8_PHYRM (V-SNARE domain-containing protein n=23 Tax=Phytophthora TaxID=4783 RepID=H3HAR8_PHYRM)

HSP 1 Score: 66.6 bits (161), Expect = 3.320e-11
Identity = 38/88 (43.18%), Postives = 58/88 (65.91%), Query Frame = 0
Query:    3 KICRSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYVVIALLSAAIVFVLY 90
            ++ +S   L+D+ R++ ETE +G  V+  L  QRESLL +   VR+TGA A +ARR+L  ++RR + + + LY  I +L AAI +VLY
Sbjct:  123 RLTKSSKKLEDTHRIVAETEEVGITVLDTLAQQRESLLGAHEKVRETGAMATEARRILQRMTRRIITNTIVLYTTIFVLIAAICYVLY 210          
BLAST of mRNA_E-fasciculatus_F_contig12750.2094.1 vs. uniprot
Match: W2JIH7_PHYPR (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2JIH7_PHYPR)

HSP 1 Score: 65.1 bits (157), Expect = 8.400e-11
Identity = 36/88 (40.91%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    3 KICRSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYVVIALLSAAIVFVLY 90
            ++ +S   L+D+ R++ ETE +G  V+  L SQRESLL +   VR+TGA   +ARR+L  ++RR + + + LY  I +L  AI +V+Y
Sbjct:   95 RLTKSSKKLEDTHRIVAETEEVGIAVLDTLASQRESLLGAHEKVRETGAMTTEARRILQRMTRRIITNTIVLYTTIFVLIVAICYVIY 182          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12750.2094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSL6_9PHAE2.970e-4998.92V-SNARE domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835ZAL4_9STRA5.680e-2054.35Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A484E001_BRELC9.250e-1343.30Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A425D3Z1_9STRA1.640e-1245.98Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A024TJZ2_9STRA1.670e-1244.33t-SNARE coiled-coil homology domain-containing pro... [more]
W4GBV3_9STRA1.690e-1243.30t-SNARE coiled-coil homology domain-containing pro... [more]
A0A485K772_9STRA8.930e-1244.44Aste57867_208 protein n=1 Tax=Aphanomyces stellatu... [more]
A0A662Y3N4_9STRA3.280e-1145.45Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
H3HAR8_PHYRM3.320e-1143.18V-SNARE domain-containing protein n=23 Tax=Phytoph... [more]
W2JIH7_PHYPR8.400e-1140.91Uncharacterized protein n=6 Tax=Phytophthora paras... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.110coord: 1..71
e-value: 1.4E-16
score: 62.4
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 5..66
e-value: 5.3E-15
score: 55.5
NoneNo IPR availablePANTHERPTHR21230:SF26VESICLE TRANSPORT THROUGH INTERACTION WITH T-SNARES HOMOLOG 1Bcoord: 2..91
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 2..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..93
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..71
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 7..63
NoneNo IPR availableTMHMMTMhelixcoord: 72..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12750contigE-fasciculatus_F_contig12750:218..517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12750.2094.1mRNA_E-fasciculatus_F_contig12750.2094.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12750 218..517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12750.2094.1 ID=prot_E-fasciculatus_F_contig12750.2094.1|Name=mRNA_E-fasciculatus_F_contig12750.2094.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=100bp
TKKICRSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTG
AAAGQARRLLGSISRRELRHRLCLYVVIALLSAAIVFVLYLKIRRRSLL*
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