mRNA_E-fasciculatus_F_contig12705.2064.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12705.2064.1 vs. uniprot
Match: D7FNE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE0_ECTSI) HSP 1 Score: 457 bits (1177), Expect = 1.310e-150 Identity = 240/296 (81.08%), Postives = 249/296 (84.12%), Query Frame = 1
Query: 208 MDIDAQRCRKHRRRPRSLLEVHSPHAVRDE--GSESEEGEGRKGKTRTPRWLETHIWHAKRMHMKHAWGFVLPAESNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEARTHLYRVNEFPLGCVAPVSVLWAPSDSAT--NTXXXXXXXXXXXXXXXXXGLSAXXXXXXXXXXXATQGEEXXXTGGPTNGLEEEREDVRRVWVWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGARSHETVQRVLRTAAATAA 1083
MD+DAQRCRKHRRRPR+LLE+HSPHAVRDE G E E G+GRK PRWLETHIWHAKRMHMKHAWGFVLPAESNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEA THLYR NEFPLGCVAPV+VLWAPSDSA N A XXXXXXX AT+G E TGG +GLEE +EDVRRVWVWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGARSHETVQRVL+TAAATAA
Sbjct: 1 MDVDAQRCRKHRRRPRALLEMHSPHAVRDEESGGEDEAGKGRK-----PRWLETHIWHAKRMHMKHAWGFVLPAESNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEAHTHLYRTNEFPLGCVAPVTVLWAPSDSAATANDEDARTNDRDTDGKNGTSAPEAGGDXXXXXXXRATEGREEGGTGGTPDGLEERQEDVRRVWVWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGARSHETVQRVLQTAAATAA 291
BLAST of mRNA_E-fasciculatus_F_contig12705.2064.1 vs. uniprot
Match: A0A6H5J7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Y8_9PHAE) HSP 1 Score: 447 bits (1151), Expect = 7.000e-147 Identity = 245/296 (82.77%), Postives = 250/296 (84.46%), Query Frame = 1
Query: 208 MDIDAQRCRKHRRRPRSLLEVHSPHAVRDEGSESEEGEGRKGKTRTPRWLETHIWHAKRMHMKHAWGFVLPAESNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEARTHLYRVNEFPLGCVAPVSVLWAPSDSATNTXXXXXXXXXXXXXXXXXGLSAXXXXXXXXXXXATQGEEXXXTGGPTNGLEEEREDVRRVWVWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGARSHETVQRVLRTAAATAAANVA 1095
MDIDAQRCRKHRRRPRSLLE+HSPHAVRDE S GE GK TPRWLETHIWHAKRMHMKHAWGFVLPAESNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEARTHLYR NEFPLGCVAPV+VLWAPSDSA + G SA XXXXXXXXX XXX GG +GLEE+ EDVRRVW WVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRG RSHETVQRVLRTAAATAA NVA
Sbjct: 1 MDIDAQRCRKHRRRPRSLLEIHSPHAVRDEESG---GESEAGKGCTPRWLETHIWHAKRMHMKHAWGFVLPAESNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEARTHLYRANEFPLGCVAPVTVLWAPSDSAASANNEDARKNDHDADGNN-GTSAPEXXXXXXXXXXXXX--XXXXGGAPDGLEEQEEDVRRVWAWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGTRSHETVQRVLRTAAATAA-NVA 289
BLAST of mRNA_E-fasciculatus_F_contig12705.2064.1 vs. uniprot
Match: UPI0014550F01 (ribonucleases P/MRP protein subunit POP1-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014550F01) HSP 1 Score: 125 bits (313), Expect = 1.130e-27 Identity = 101/318 (31.76%), Postives = 144/318 (45.28%), Query Frame = 1
Query: 7 QALPRHMRRRTTSHTPRRMPVALKNSGGAAPNNGRGRSSKNKRPGRRQGSAAKSSSSKGDARGPGGDMDIDAQRCRKHRRRPRSLLEVHSPHAVRDEGSESEEGEGRKGKTRTPRWLETHIWHAKRMHMKHAWGFVLPAE-SNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRP-KQQSCVDGFVEARTHLYRVNEFPLGCVAPVSVLWAPSDSATNTXXXXXXXXXXXXXXXXXGLSAXXXXXXXXXXXATQGEEXXXTGGPTNGLEEEREDVRRVWVWVHPAAAKEALREIRKACDLE 954
Q LPRH+RRR SH RR+P L+ S A N G NK+ GR + +GD G+ A+R R+HRRRP +L RDE + R+ WLETHIWHAKR M WG LP S++ RA A +KHC +QD+++M+ +E+ G + L ALS +T P S + G T LY+ ++FP G + PV+ LW ++ T +E + N LE+ VR++WVW HPA + ++E++ AC+ E
Sbjct: 53 QKLPRHLRRRAMSHDLRRLPKRLRESEERAMNKGA-----NKKTGRGK---------EGD-----GETSAPAKRSRRHRRRPSNL---------RDEYQRRQ---------RSNTWLETHIWHAKRFKMAELWGHRLPLHPSDKSVRATYRALVKHCLIQDISYMKVIEVSGQQGHTLKALSHLTSPSTGLTCAAASYLSGQRHGDTVLYKYDQFPEGALGPVNFLWRAEGGFKSSSKPEET--------------------------TTVDQEGMLSVRKANKLEDS--SVRQLWVWAHPACTEVLVKELQTACENE 305
BLAST of mRNA_E-fasciculatus_F_contig12705.2064.1 vs. uniprot
Match: A0A8B7Y7J8_ACAPL (ribonucleases P/MRP protein subunit POP1-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y7J8_ACAPL) HSP 1 Score: 122 bits (306), Expect = 9.420e-27 Identity = 102/364 (28.02%), Postives = 155/364 (42.58%), Query Frame = 1
Query: 7 QALPRHMRRRTTSHTPRRMPVALKNSGGAAPNNGRGRSSKNKRPGRRQGSAAKSSSSKGDARGPGGDMDID---AQRCRKHRRRPRSLLEVHSPHAVRDEGSESEEGEGRKGKTRTPRWLETHIWHAKRMHMKHAWGFVLPAE-SNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEARTH----LYRVNEFPLGCVAPVSVLWAPSDSATNTXXXXXXXXXXXXXXXXXGLSAXXXXXXXXXXXATQGEEXXXTGGP--TNGLEEEREDVRRVWVWVHPAAAKEALREIRKACDLEGSPWQGC--VQAGPVPGGLCRLRVRGARSHETVQRVLR 1062
Q LPRH+RRR SH RR+P L++S + + KS K +G G + D A+R R+HRRRP +L + R +G + WLETHIWHAKR M WG+ LP S++ RA A +HC LQD++++R +E+ GP+ L ALS +T P F+ + H YR ++FP G + PV LW + ++ + +E G P + G + E + VR++W+W HP+ A E L+E++ A + E + V + R R++G SH + L+
Sbjct: 53 QKLPRHLRRRAMSHDLRRLPKRLRDS--------------------EERTMQKSMHKKKAGQGKEGGAEEDLPPAKRSRRHRRRPSNLKAEYQ----RRQGGHA--------------WLETHIWHAKRFKMVGQWGYKLPLHPSDKSIRATYRAMARHCLLQDVSYLRVVEMSGPQGLTLRALSRLTSPSTGLT---CAAAAFLSGQRHGEAVFYRKDQFPQGAIGPVQFLWKAEATLADSVPKAKG----------------------------ESQEGCEAGMPAASPGGKFEEKGVRKLWLWAHPSCASELLKELKAASEAENANTDSNSRVTVTQLKDSPLRFRLQGPLSHPVLLHALK 347
BLAST of mRNA_E-fasciculatus_F_contig12705.2064.1 vs. uniprot
Match: A0A7M7NLS1_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NLS1_STRPU) HSP 1 Score: 118 bits (295), Expect = 2.630e-25 Identity = 96/359 (26.74%), Postives = 151/359 (42.06%), Query Frame = 1
Query: 7 QALPRHMRRRTTSHTPRRMPVALKNSGGAAPNNGRGRSSKNKRPGRRQGSAAKSSSSKGDARGPGGDMDIDAQRCRKHRRRPRSLLEVHSPHAVRDEGSESEEGEGRKGKTRTPRWLETHIWHAKRMHMKHAWGFVLPAE-SNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDP-LDSRPKQQSCVDGFVEARTHLYRVNEFPLGCVAPVSVLWAPSDSATNTXXXXXXXXXXXXXXXXXGLSAXXXXXXXXXXXATQGEEXXXTGGPTNGLEEEREDVRRVWVWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGARSHETVQRVLRTAAAT 1077
Q LPRH++RR SH +RMP L++ A+ K + P D D A++ R+HRRRP +L E ++ +R+ RWLETHIWHAKR M WG+ +P S++ RAA A +HC + D+++ + +E++G IL A+ +T P + ++ + G LY+ + +P G + PV LW A+ A + +E G NG +E+ RR+W+WVHP+ +E L E++ C V P+ L R R++G +H + L+ A T
Sbjct: 54 QKLPRHIQRRAMSHNIKRMPRRLRD-------------------------IARIEVEKNPQKKPKSDADGAAKKSRRHRRRPGNLREEYAKRQMRN------------------RWLETHIWHAKRFKMVERWGWKIPLHPSDKSARAAYRATARHCVMSDISYHQVIEVQGSEVNILSAMKHLTSPQVGLTMASRAYLHGTRHGEVLLYQKDTYPHGAIGPVDYLWHCELHAS------------------------------PPAGAAERQELKREDG-VNGDDEKVTTDRRLWMWVHPSCWREVLEELKGVCSDYN------VSITPLEDELLRFRLQGPLAHPILLDALQVAMVT 332
BLAST of mRNA_E-fasciculatus_F_contig12705.2064.1 vs. uniprot
Match: A0A329S154_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S154_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.590e-23 Identity = 84/280 (30.00%), Postives = 119/280 (42.50%), Query Frame = 1
Query: 211 DIDAQRCRKHRRRPRSLLEVHSPHAVRDEGSESEEGEGRKGKTRTPRWLETHIWHAKRMHMKHAWGFVLPAE-SNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEARTHLYRVNEFPLGCVAPVSVLWAPSDSATNTXXXXXXXXXXXXXXXXXGLSAXXXXXXXXXXXATQGEEXXXTGGPTNGLEEEREDVRRVWVWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGARSHETV 1047
D A RCRKH RRP LL+ S +SE PRWL TH+WHAKRM M +G++L +++ AA++A K TL D ++ +EL G IL AL V+DP S + G E + LY +FP G +APV+ +W P ++ G E+ + R++W+WVHPAA EA I AC + + ++ G LCRL++RG + E V
Sbjct: 72 DQSALRCRKHERRPHKLLQARS-------NVDSER----------PRWLSTHLWHAKRMTMSEQYGYILALHRADKSASAALQAVRKMATLHDSSYYGVIELYGLPQVILEALQLVSDPNGSDFHGLRFLAGSEEGTSMLYHEGQFPQGAIAPVTFMWRPLKRDYDS-------------------------------------------GEFKLHEDWQNTKRQLWIWVHPAAYMEAATAIAAACQEVVAEDEEGIEMHDRRGQLCRLKLRGRLADELV 291
BLAST of mRNA_E-fasciculatus_F_contig12705.2064.1 vs. uniprot
Match: UPI001BB2B30D (ribonucleases P/MRP protein subunit POP1-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2B30D) HSP 1 Score: 111 bits (278), Expect = 4.250e-23 Identity = 89/359 (24.79%), Postives = 146/359 (40.67%), Query Frame = 1
Query: 7 QALPRHMRRRTTSHTPRRMPVALKNSGGAAPNNGRGRSSKNKRPGRRQGSAAKSSSSKGDARGPGGDMDIDAQRCRKHRRRPRSLLEVHSPHAVRDEGSESEEGEGRKGKTRTPRWLETHIWHAKRMHMKHAWGFVLPAE-SNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDP-LDSRPKQQSCVDGFVEARTHLYRVNEFPLGCVAPVSVLWAPSDSATNTXXXXXXXXXXXXXXXXXGLSAXXXXXXXXXXXATQGEEXXXTGGPTNGLEEEREDVRRVWVWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGARSHETVQRVLRTAAAT 1077
Q LPRHMRRR SH +RMP L+ + A+ + + + P D A++ R+HRRRP +L E+++ +R+ RW+ETHIWHAKR M WG+ +P S++ RA A +HC + D+++ + +E++G I+ A+ +T P + ++ + G LY + +P G + PV LW A+ +E GG + +RR+W+W+HP+ KE + E++ C V P+ L R R++G +H + L+ A T
Sbjct: 54 QKLPRHMRRRAMSHNIKRMPRRLREN-------------------------ARIQAERSVKKKPKQDTTGAAKQSRRHRRRPGNLREMYAKRQMRN------------------RWMETHIWHAKRFKMVERWGWKIPLHPSDKSARAVYRATARHCVISDISYHQVIEVQGTEVNIISAMKHLTSPHVGLTMASRAYLHGTRHGGVLLYHRDTYPHGAIGPVDYLWHCELHASMAPP------------------------------GAHSQELNSNGGDDDNK------IRRLWMWIHPSCWKEVIDELKVVCSDYN------VSVTPLEDELLRFRLQGPLAHPILLDALQVATVT 327
BLAST of mRNA_E-fasciculatus_F_contig12705.2064.1 vs. uniprot
Match: M4BLU4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BLU4_HYAAE) HSP 1 Score: 108 bits (269), Expect = 5.740e-22 Identity = 78/282 (27.66%), Postives = 122/282 (43.26%), Query Frame = 1
Query: 214 IDAQRCRKHRRRPRSLLEVHSPHAVRDEGSESEEGEGRKGKTRTPRWLETHIWHAKRMHMKHAWGFVLPAE-SNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEARTHLYRVNEFPLGCVAPVSVLWAPSDSATNTXXXXXXXXXXXXXXXXXGLSAXXXXXXXXXXXATQGEEXXXTGGPTNGLEEEREDVRRVWVWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGARSHETVQRV 1056
+ + RCRKH+RRPR LL+ S + D PRWL +H++HAKRM M +G++L A S++ AA++A + D+++ +EL G IL AL ++DP S + + G E + LY V FP G +APV+ +W P ++ E+ + R++W+WVHPAA E+ I AC G+ + ++ G LCRL++RG + E V +
Sbjct: 72 LGSLRCRKHKRRPRMLLQERSSLSKADADR--------------PRWLPSHLYHAKRMAMVAQYGYILAAHRSDKSVSAALQAVRTKAMIHDVSYYGVIELYGLPSVILTALQLISDPNGSDFHGRRFLAGDEEGHSMLYHVGRFPQGAIAPVTFMWRPLKRDYDSDRFMLH-------------------------------------------EDWQSTKRQLWLWVHPAAYMESATAIATACQEVGNTDEDSIEMLDRRGQLCRLKLRGRIADELVANI 296
BLAST of mRNA_E-fasciculatus_F_contig12705.2064.1 vs. uniprot
Match: A0A2P4YKS9_9STRA (Ribonucleases P/MRP protein subunit n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YKS9_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.310e-21 Identity = 83/280 (29.64%), Postives = 120/280 (42.86%), Query Frame = 1
Query: 220 AQRCRKHRRRPRSLLEVHSPHAVRDEGSESEEGEGRKGKTRTPRWLETHIWHAKRMHMKHAWGFVLPAE-SNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEARTHLYRVNEFPLGCVAPVSVLWAPSDSATNTXXXXXXXXXXXXXXXXXGLSAXXXXXXXXXXXATQGEEXXXTGGPTNGLEEEREDVRR-VWVWVHPAAAKEALREIRKAC-DLEGSPWQGCVQAGPVPGGLCRLRVRGARSHETVQ 1050
A RCRKH RRP LL+ V D + PRWL +H+WHAKRM M+ +G++L +++ AA++A + D ++ +EL G IL AL V+DP S + G E R+ LY +FP G +APV+ +W P + GP L E + +R +W+WVHPAA EA I AC ++ G G ++ G LCRL++RG + E V+
Sbjct: 75 ASRCRKHERRPHKLLQ---DRCVAD--------------SERPRWLSSHLWHAKRMTMRSQYGYILAVHRADKSVSAALQAVREKAISHDASYYGVIELFGLPQMILEALQLVSDPNGSDFHGLKFLAGTDEGRSMLYHEGQFPQGAIAPVTFMWRPLKKDYD--------------------------------------------GPEFKLHEGWQQTKRQLWLWVHPAAYMEAAMAIAAACQEVVGEDEDG-IEMHDRRGQLCRLKLRGRLADELVE 292
BLAST of mRNA_E-fasciculatus_F_contig12705.2064.1 vs. uniprot
Match: A0A7R9FNY3_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9FNY3_9CRUS) HSP 1 Score: 104 bits (260), Expect = 8.080e-21 Identity = 77/242 (31.82%), Postives = 108/242 (44.63%), Query Frame = 1
Query: 7 QALPRHMRRRTTSHTPRRMPVALKNSGGAAPNNGRGRSSKNKRPGRRQGSAAKSSSSKGDARGPGGDMDIDAQRCRKHRRRPRSLLEVHSPHAVRDEGSESEEGEGRKGKTRTPRWLETHIWHAKRMHMKHAWGFVLP-AESNRGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDP---------LDSRPKQQSCVDGFVEARTHLYRVNEFPLGCVAPVSVLWAPSDSAT 702
Q LP+H+RRR SH P+R+P ++ G + KRP RK+RRRP+ L + E + + R P+WLETH+WHAKR HMK WG+ +P + +++G R A A C + DL++ R LELRG IL AL + P R +++ CV LY+ N +PLG + PVS LW PS+ T
Sbjct: 60 QQLPQHLRRRAASHNPKRLPARIRQLAGTQT------PKEPKRP------------------------------SRKYRRRPKIL-----------------KSEYYRRQKRGPKWLETHVWHAKRFHMKEKWGWKIPLSPTDKGTRFAYRATTNSCIIFDLSYWRCLELRGLEANILRALQPMNPPECGPSFGGIAQLRLQREGCVV--------LYQPNTYPLGAIGPVSFLWLPSEEET 240 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12705.2064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12705.2064.1 >prot_E-fasciculatus_F_contig12705.2064.1 ID=prot_E-fasciculatus_F_contig12705.2064.1|Name=mRNA_E-fasciculatus_F_contig12705.2064.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=358bp MRRRTTSHTPRRMPVALKNSGGAAPNNGRGRSSKNKRPGRRQGSAAKSSSback to top mRNA from alignment at E-fasciculatus_F_contig12705:457..3858+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12705.2064.1 ID=mRNA_E-fasciculatus_F_contig12705.2064.1|Name=mRNA_E-fasciculatus_F_contig12705.2064.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3402bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12705:457..3858+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12705:457..3858+ >mRNA_E-fasciculatus_F_contig12705.2064.1 ID=mRNA_E-fasciculatus_F_contig12705.2064.1|Name=mRNA_E-fasciculatus_F_contig12705.2064.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2148bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12705:457..3858+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |