prot_E-fasciculatus_F_contig12696.2056.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12696.2056.1
Unique Nameprot_E-fasciculatus_F_contig12696.2056.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length402
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12696.2056.1 vs. uniprot
Match: A0A6H5JGI2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGI2_9PHAE)

HSP 1 Score: 485 bits (1248), Expect = 8.750e-159
Identity = 340/432 (78.70%), Postives = 345/432 (79.86%), Query Frame = 0 
Query:    1 LEQLEWPSKCLRTWLSLEVTSAPKAGQRRQQPSPXXXXXXXXXXXXVRPGAESGKQGNRKGNMPATGGQGPEGASPSG----------AGARRTGASTEQEAASAAAAPEADAGKSXXXXXXXXXXXXXXXXXXXXXXXXGDVELEWFVLARLQGSLVGAPADGVERRFTSFFSSVALELDGKAFPDVAAVEWVRSAGCEELHCVELRLPLAGCLSRGLKEISVKAVLAARVDEDRPRRFV-----------------VSAPLRQVLRLAKRVETKPVLMAAVYEALRLKGALPGGTRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TMLHCDPELAGVLGASSFPFSQLEEALGPHVEPAESPSLAATVSLEKGSAVENCADVTVDTETPFQLRAAQSLLGSDCGRGAREGGGGSAEGAPLRQNG 402
            LEQLEWPSKCLRTWLSLEVTSAPK GQR +QP          XXXX RPGAESGKQGNR+G MPAT G+G EG  PS            GARR GA TEQEAAS AA         XXXXXXXXXXX             GDVELEWFVLARLQGSLVGAPADGVERRFTSFFSSVALELDGKAFPDVAAVEWVRSA CEELHCVELRLPLAGCLSRGLKEISVKAVLAARVDEDRPRRFV                 VSAPLRQVLRL KRV+TKPVLMAAVYEALRLKGALPGGTRA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TMLHCDPELA VLGASSFPFSQLEEALGPHVEPAESPSL ATVSLEKG+AVE CADVTVDTETPFQLRAAQSLLGSD GRGA    GGSAEGAP RQNG
Sbjct:  221 LEQLEWPSKCLRTWLSLEVTSAPKPGQRGRQPP-------QQXXXXSRPGAESGKQGNRRGKMPATSGKGTEGTPPSXXXXXXXXXXXVGARRAGAGTEQEAASVAAPKXXXXXXXXXXXXXXXXXXDDGMKAVDAGGDGGDVELEWFVLARLQGSLVGAPADGVERRFTSFFSSVALELDGKAFPDVAAVEWVRSARCEELHCVELRLPLAGCLSRGLKEISVKAVLAARVDEDRPRRFVPPKSCPVRTARHLVPFVVSAPLRQVLRLTKRVDTKPVLMAAVYEALRLKGALPGGTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMLHCDPELARVLGASSFPFSQLEEALGPHVEPAESPSLVATVSLEKGNAVETCADVTVDTETPFQLRAAQSLLGSDGGRGA----GGSAEGAP-RQNG 640
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12696.2056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGI2_9PHAE8.750e-15978.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13844:SF7BRAHMA-ASSOCIATED PROTEIN OF 60 KDAcoord: 155..376
NoneNo IPR availablePANTHERPTHR13844BRG-1 ASSOCIATED FACTOR 60 BAF60coord: 155..376

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12696contigE-fasciculatus_F_contig12696:3..3670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12696.2056.1mRNA_E-fasciculatus_F_contig12696.2056.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12696 3..3671 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12696.2056.1 ID=prot_E-fasciculatus_F_contig12696.2056.1|Name=mRNA_E-fasciculatus_F_contig12696.2056.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=402bp
LEQLEWPSKCLRTWLSLEVTSAPKAGQRRQQPSPQPPQQQQQQQQQVRPG
AESGKQGNRKGNMPATGGQGPEGASPSGAGARRTGASTEQEAASAAAAPE
ADAGKSAAAAAAGQGDDGGKKALAAAEGTGGDVELEWFVLARLQGSLVGA
PADGVERRFTSFFSSVALELDGKAFPDVAAVEWVRSAGCEELHCVELRLP
LAGCLSRGLKEISVKAVLAARVDEDRPRRFVVSAPLRQVLRLAKRVETKP
VLMAAVYEALRLKGALPGGTRAAAVAAAAADPNGAGGGEGGHGGGSGGGG
GGGTMLHCDPELAGVLGASSFPFSQLEEALGPHVEPAESPSLAATVSLEK
GSAVENCADVTVDTETPFQLRAAQSLLGSDCGRGAREGGGGSAEGAPLRQ
NG
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