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Homology
BLAST of mRNA_E-fasciculatus_F_contig12696.2056.1 vs. uniprot
Match: A0A6H5JGI2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGI2_9PHAE) HSP 1 Score: 485 bits (1248), Expect = 8.750e-159 Identity = 340/432 (78.70%), Postives = 345/432 (79.86%), Query Frame = 1
Query: 1 LEQLEWPSKCLRTWLSLEVTSAPKAGQRRQQPSPXXXXXXXXXXXXVRPGAESGKQGNRKGNMPATGGQGPEGASPSG----------AGARRTGASTEQEAASAAAAPEADAGKSXXXXXXXXXXXXXXXXXXXXXXXXGDVELEWFVLARLQGSLVGAPADGVERRFTSFFSSVALELDGKAFPDVAAVEWVRSAGCEELHCVELRLPLAGCLSRGLKEISVKAVLAARVDEDRPRRFV-----------------VSAPLRQVLRLAKRVETKPVLMAAVYEALRLKGALPGGTRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TMLHCDPELAGVLGASSFPFSQLEEALGPHVEPAESPSLAATVSLEKGSAVENCADVTVDTETPFQLRAAQSLLGSDCGRGAREGGGGSAEGAPLRQNG 1206
LEQLEWPSKCLRTWLSLEVTSAPK GQR +QP XXXX RPGAESGKQGNR+G MPAT G+G EG PS GARR GA TEQEAAS AA XXXXXXXXXXX GDVELEWFVLARLQGSLVGAPADGVERRFTSFFSSVALELDGKAFPDVAAVEWVRSA CEELHCVELRLPLAGCLSRGLKEISVKAVLAARVDEDRPRRFV VSAPLRQVLRL KRV+TKPVLMAAVYEALRLKGALPGGTRA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TMLHCDPELA VLGASSFPFSQLEEALGPHVEPAESPSL ATVSLEKG+AVE CADVTVDTETPFQLRAAQSLLGSD GRGA GGSAEGAP RQNG
Sbjct: 221 LEQLEWPSKCLRTWLSLEVTSAPKPGQRGRQPP-------QQXXXXSRPGAESGKQGNRRGKMPATSGKGTEGTPPSXXXXXXXXXXXVGARRAGAGTEQEAASVAAPKXXXXXXXXXXXXXXXXXXDDGMKAVDAGGDGGDVELEWFVLARLQGSLVGAPADGVERRFTSFFSSVALELDGKAFPDVAAVEWVRSARCEELHCVELRLPLAGCLSRGLKEISVKAVLAARVDEDRPRRFVPPKSCPVRTARHLVPFVVSAPLRQVLRLTKRVDTKPVLMAAVYEALRLKGALPGGTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMLHCDPELARVLGASSFPFSQLEEALGPHVEPAESPSLVATVSLEKGNAVETCADVTVDTETPFQLRAAQSLLGSDGGRGA----GGSAEGAP-RQNG 640
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 487.6 |
| Seed ortholog evalue | 5.4e-135 |
| Seed eggNOG ortholog | 2880.D8LDV7 |
| KEGG ko | ko:K11650 |
| KEGG Pathway | ko04714,ko05225,map04714,map05225 |
| GOs | GO:0000228,GO:0000785,GO:0000790,GO:0003674,GO:0003682,GO:0005102,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006333,GO:0006337,GO:0006338,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009909,GO:0009987,GO:0010224,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016514,GO:0019219,GO:0019222,GO:0022411,GO:0022622,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031498,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032947,GO:0032984,GO:0032986,GO:0032991,GO:0033554,GO:0034641,GO:0034728,GO:0040029,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045815,GO:0045893,GO:0045935,GO:0046483,GO:0048096,GO:0048364,GO:0048518,GO:0048522,GO:0048580,GO:0048731,GO:0048831,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051239,GO:0051252,GO:0051254,GO:0051276,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070603,GO:0071564,GO:0071565,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097458,GO:0099402,GO:1901360,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1904949,GO:2000024,GO:2000026,GO:2000112,GO:2000241,GO:2001141 |
| EggNOG free text desc. | SWIB/MDM2 domain |
| EggNOG OGs | COG5531@1,KOG2570@2759 |
| COG Functional cat. | B |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03021,ko03036 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-08_003530.1 |
| Exons | 5 |
| Model size | 1207 |
| Cds size | 1206 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12696.2056.1 >prot_E-fasciculatus_F_contig12696.2056.1 ID=prot_E-fasciculatus_F_contig12696.2056.1|Name=mRNA_E-fasciculatus_F_contig12696.2056.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=402bp
LEQLEWPSKCLRTWLSLEVTSAPKAGQRRQQPSPQPPQQQQQQQQQVRPG
AESGKQGNRKGNMPATGGQGPEGASPSGAGARRTGASTEQEAASAAAAPE
ADAGKSAAAAAAGQGDDGGKKALAAAEGTGGDVELEWFVLARLQGSLVGA
PADGVERRFTSFFSSVALELDGKAFPDVAAVEWVRSAGCEELHCVELRLP
LAGCLSRGLKEISVKAVLAARVDEDRPRRFVVSAPLRQVLRLAKRVETKP
VLMAAVYEALRLKGALPGGTRAAAVAAAAADPNGAGGGEGGHGGGSGGGG
GGGTMLHCDPELAGVLGASSFPFSQLEEALGPHVEPAESPSLAATVSLEK
GSAVENCADVTVDTETPFQLRAAQSLLGSDCGRGAREGGGGSAEGAPLRQ
NG back to topmRNA from alignment at E-fasciculatus_F_contig12696:3..3671+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig12696.2056.1 ID=mRNA_E-fasciculatus_F_contig12696.2056.1|Name=mRNA_E-fasciculatus_F_contig12696.2056.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3669bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12696:3..3671+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTCGAACAGCTGGAGTGGCCGTCCAAGTGCCTGCGCACGTGGCTGTCGCT
GGAGGTGACGAGCGCGCCGAAGGCGGGGCAGAGACGGCAGCAGCCATCGC
CGCAGCCACCGCAGCAGCAGCAGCAGCAGCAGCAGCAGGTAAGGCCCGGC
GCGGAGTCAGGAAAGCAGGGGAATCGAAAGGGGAATATGCCGGCGACCGG
GGGTCAGGGACCCGAGGGTGCATCACCGTCAGGAGCAGGAGCGAGGAGGA
CGGGAGCGAGCACGGAGCAGGAGGCCGCAAGCGCGGCGGCGGCGCCCGAG
GCCGACGCGGGAAAGTCGGCCGCTGCTGCTGCTGCCGGTCAAGGAGACGA
CGGCGGCAAGAAGGCCTTAGCTGCGGCGGAGGGGACAGGGGGCGACGTGG
AGTTGGAATGGTTCGTGCTGGCAAGGCTCCAGGGGTCGTTGGTGGGCGCC
CCCGCTGACGGGGTGGAGAGGCGGTTCACGTCGTTCTTCTCGAGCGTGGC
GTTGGAGCTGGACGGGAAGGCGTTCCCGGACGTTGCGGCTGTGGAGGTGG
GTGGTGGCTGTGTTTTTTTCAGGACTGCCTACACGCAAAGAAACTAAAGT
GTGTTACGAGGAAAGACCAGGCAGGGGGCACGCAGACCCAAACCGTAACC
CCCAACTTTGCCATTTCTATACTGTTGCCAGAATAGGTTAGCTTACTTTA
GTGAACCAACTGCGTAGACTAGTATTGTTGTGTTCAGAGCCTCTTTGGTC
GTACAGTAATAGGACGGGAGCGAGAAGGGTGTGGTTCGTTGGAGCGTTGC
TGAAACCGTGACTTTCCCGACTTATCGGGGGGGGGGGGGGGGGGGGTTGT
GCAGGAGACGCGCCTGTGGCTTTCTCTTACGCTTATTCAAACACTTGATC
TTTGTAGACTGATTTTTTTCTTTGCCATCATCACTGAGATCATCGTCCCA
TCTGTGCTCCCCTGCCATGTGTTGCGCTTGTCCCTGCTCCGGAAATTTCT
TCCGTTCTTCTTCGGCGGACAAATTTGTTTCCCCCCCCGCTACTCCTCCG
GCAACAACGTGAAGTGGGTGCGGTCAGCGGGGTGCGAGGAGCTCCACTGC
GTCGAGCTGCGGCTCCCGTTGGCCGGGTGCCTGTCGAGGGGGCTGAAGGA
GATCAGCGTCAAGGCGGTGCTGGCGGCGAGAGTGGACGAGGACAGGCCGC
GCAGGTTTGTGCCGCCCAAGTCTTGCTTGCCCCATACGTACGGCCCGCCA
TAGTCGTACTGTGCATACAGGACAAAATGTTTTCATGCTTTTTGTGCCTC
AACCGCGTGGCCCCATACGCTCGCCACCTTCAATCGCACTGTGGAGATCA
GAATACTTGCCTGCCTTTTTGTGCGGCAAATGCGCGGCTCCATGCGCCCG
CCACCATGTGCCAAGTTAGATACCAGAACGTTTCACTTTTTTTCGCCCCA
CCAAAGCAGCAGTAGTGCAGTAAATGCATGGAGCTGTGGATGCCCCACCC
CCCCCTGAGCCTGCGAAAAGCCGGCATATCGCTCCGTCCCGTCATTGCAA
GGTTTGCGAGGTCAATGGTCTATAGCGCGTGAGGCATGCGTTTCCATGAG
TGCACGCCCCCCCCTCTCTGCTTCCCTCGTTTTATGCTGCCCAACGATTT
GAGGTGGTACGGGCGACGACTCCTGTTGTGAGCCCTGCCTATCCTGTATT
GATTTCCGTTCCCTCCTCTTCCCCCCCTGTGTGTGTGGTCGGATGCGGTG
CGGCAGGTTTGTCGTATCTGCTCCCCTTAGGCAGGTCCTCCGGCTGGCGA
AGCGCGTGGAGACCAAGCCCGTGCTGGTGAGAGAGGCAATCATTCCACTG
CTGTCCTTGTAGACGGGGCGGTAGTTGTGTCTTCCTTGCTGTTGGTTCCT
CTTACAGCGTCGGTGCGTAGCTTTGCTCCCTGTGAGCAAAAGGGGGTGCC
GCGATAACTGTGAACCCTTGCGATGGAGCATGGACACGGACTGTGCCTGC
AGTGTTCTTGCGCACGTTGTCAGGGGGTTTCCTGAGACAGGTTCTGTGAG
CGTGCTCATAGGCAAGGTGTGGTCGGCACGGTTTCTGATTGCGACGATTA
TCACTGCAAGATTATCGTCGCCGCGTTTTGAATTTTGTGGACTTGCTTCC
CCCCCTTTCTCAACCGAGAGCCAACAGACGCTTACGTTGAGACGCTGTCT
GGCCACGTCATCGTGCATTGCATGGAATATAGTCAAAAAAAAATTACTAC
CCCATGCACCAAAAATACCCTGATAAGTGTAGTACTCCTACATACACTGA
GTGTACACGCCTCACGACGGAAAATGGGGGGACTGTTACTGTTTATATAG
GACGAAAACACACACACACACACAACCCCAACATACACCCGTCTACAATG
CATCCCTGCCGTGTGCGTGACAACAAGATGGCGGCTGTTTACGAAGCTTT
GCGGCTCAAGGGCGCGCTCCCCGGGGGCACAAGAGCAGCAGCAGTGGCGG
CGGCGGCAGCAGATCCAAATGGTGCCGGCGGTGGGGAAGGCGGTCACGGT
GGCGGCAGCGGTGGCGGCGGCGGCGGCGGGACCATGCTCCACTGCGACCC
CGAACTCGCGGGGGTTTTGGGCGCGTCGTCCTTCCCCTTCAGCCAGCTGG
AGGAGGCCCTCGGTCCTCACGTAGAACCCGCCGAATCCCCTTCCTTGGCC
GCCACAGTCTCGTGAGTAGAACCCGCCGCATGGACTTCTTTAGTTGCCAC
TACTGTCTCGTTGAGTGGGACGCCGAATGACGCGGTTTGGTTGACAGTCT
CGTGAGTAGAACCCGCCGCCGAATCACCGCTCTTAGTTGCTACAGTCTCG
TTGAGTACCGGCCGAATGATCCTCCTGGGTCATCACATGCTCGTGGGTTG
AACCCGCTCTATATGCTCCCTTGGTTGCCACAGTCTTCGTGAGTCGAGCC
TGCCGCATGGAATTCTTTAGTTGCCACAGTCTTGTGGAGTACAACCCACC
GAATGTCCTTCCACAGTTGCCACAACAAAATCGTGAGAAGAATCCGCCGA
ACCCCATTCCTTGGTCGCCACAGTCTCGTGGGCCGTTGCCAAGGCTCATT
TTTCGTCAAAGTCGCATGAGTGTTTTTGCGTCCCGGTTGGTGGTTACAGC
TGCCGGCCTCGCGGTTTACGTGCCATGTTTATTGTGTGTTGTCACGATGT
GTGTGGATGAGTTTCGCGGTTGGGGGCTGGCTGGGAGTCCTTTTTTTCGC
CAACTCCGACCCCAGCGGCGTGTTCGCGAGAAGCGTTTGGCCGACTGGCC
AAAAATCCCCAGCGCTCCTGCGTGTCTCCTCAGCCTACGCTGAGCTGTTT
TTTTCCTGCCCGCAAACATCTACCGACGTGATGTAGTTACAAAAAGTGTT
CCATTCAGGTTAACCCCCCACCACCATCACCACACGTGCAAATCCACACC
TCCACCCTCATCTCGATAGCTGTCGCGCGTCTATGCCACAACACACACAC
AGGCTGGAGAAAGGGAGCGCGGTGGAGAATTGCGCGGACGTGACCGTCGA
CACCGAGACCCCCTTTCAGCTTCGGGCGGCGCAGTCGCTTCTCGGCAGCG
ATTGCGGCAGAGGGGCAAGAGAAGGAGGGGGAGGAAGCGCGGAAGGAGCA
CCCCTCCGTCAGAACGGCG back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig12696:3..3671+ >mRNA_E-fasciculatus_F_contig12696.2056.1 ID=mRNA_E-fasciculatus_F_contig12696.2056.1|Name=mRNA_E-fasciculatus_F_contig12696.2056.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2412bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12696:3..3671+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTCGAACAGCTGGAGTGGCCGTCCAAGTGCCTGCGCACGTGGCTGTCGCT
GGAGGTGACGAGCGCGCCGAAGGCGGGGCAGAGACGGCAGCAGCCATCGC
CGCAGCCACCGCAGCAGCAGCAGCAGCAGCAGCAGCAGGTAAGGCCCGGC
GCGGAGTCAGGAAAGCAGGGGAATCGAAAGGGGAATATGCCGGCGACCGG
GGGTCAGGGACCCGAGGGTGCATCACCGTCAGGAGCAGGAGCGAGGAGGA
CGGGAGCGAGCACGGAGCAGGAGGCCGCAAGCGCGGCGGCGGCGCCCGAG
GCCGACGCGGGAAAGTCGGCCGCTGCTGCTGCTGCCGGTCAAGGAGACGA
CGGCGGCAAGAAGGCCTTAGCTGCGGCGGAGGGGACAGGGGGCGACGTGG
AGTTGGAATGGTTCGTGCTGGCAAGGCTCCAGGGGTCGTTGGTGGGCGCC
CCCGCTGACGGGGTGGAGAGGCGGTTCACGTCGTTCTTCTCGAGCGTGGC
GTTGGAGCTGGACGGGAAGGCGTTCCCGGACGTTGCGGCTGTGGAGCTCG
AACAGCTGGAGTGGCCGTCCAAGTGCCTGCGCACGTGGCTGTCGCTGGAG
GTGACGAGCGCGCCGAAGGCGGGGCAGAGACGGCAGCAGCCATCGCCGCA
GCCACCGCAGCAGCAGCAGCAGCAGCAGCAGCAGGTAAGGCCCGGCGCGG
AGTCAGGAAAGCAGGGGAATCGAAAGGGGAATATGCCGGCGACCGGGGGT
CAGGGACCCGAGGGTGCATCACCGTCAGGAGCAGGAGCGAGGAGGACGGG
AGCGAGCACGGAGCAGGAGGCCGCAAGCGCGGCGGCGGCGCCCGAGGCCG
ACGCGGGAAAGTCGGCCGCTGCTGCTGCTGCCGGTCAAGGAGACGACGGC
GGCAAGAAGGCCTTAGCTGCGGCGGAGGGGACAGGGGGCGACGTGGAGTT
GGAATGGTTCGTGCTGGCAAGGCTCCAGGGGTCGTTGGTGGGCGCCCCCG
CTGACGGGGTGGAGAGGCGGTTCACGTCGTTCTTCTCGAGCGTGGCGTTG
GAGCTGGACGGGAAGGCGTTCCCGGACGTTGCGGCTGTGGAGTGGGTGCG
GTCAGCGGGGTGCGAGGAGCTCCACTGCGTCGAGCTGCGGCTCCCGTTGG
CCGGGTGCCTGTCGAGGGGGCTGAAGGAGATCAGCGTCAAGGCGGTGCTG
GCGGCGAGAGTGGACGAGGACAGGCCGCGCAGTGGGTGCGGTCAGCGGGG
TGCGAGGAGCTCCACTGCGTCGAGCTGCGGCTCCCGTTGGCCGGGTGCCT
GTCGAGGGGGCTGAAGGAGATCAGCGTCAAGGCGGTGCTGGCGGCGAGAG
TGGACGAGGACAGGCCGCGCAGGTTTGTCGTATCTGCTCCCCTTAGGCAG
GTCCTCCGGCTGGCGAAGCGCGTGGAGACCAAGCCCGTGCTGGTTTGTCG
TATCTGCTCCCCTTAGGCAGGTCCTCCGGCTGGCGAAGCGCGTGGAGACC
AAGCCCGTGCTGATGGCGGCTGTTTACGAAGCTTTGCGGCTCAAGGGCGC
GCTCCCCGGGGGCACAAGAGCAGCAGCAGTGGCGGCGGCGGCAGCAGATC
CAAATGGTGCCGGCGGTGGGGAAGGCGGTCACGGTGGCGGCAGCGGTGGC
GGCGGCGGCGGCGGGACCATGCTCCACTGCGACCCCGAACTCGCGGGGGT
TTTGGGCGCGTCGTCCTTCCCCTTCAGCCAGCTGGAGGAGGCCCTCGGTC
CTCACGTAGAACCCGCCGAATCCCCTTCCTTGGCCGCCACAGTCTCATGG
CGGCTGTTTACGAAGCTTTGCGGCTCAAGGGCGCGCTCCCCGGGGGCACA
AGAGCAGCAGCAGTGGCGGCGGCGGCAGCAGATCCAAATGGTGCCGGCGG
TGGGGAAGGCGGTCACGGTGGCGGCAGCGGTGGCGGCGGCGGCGGCGGGA
CCATGCTCCACTGCGACCCCGAACTCGCGGGGGTTTTGGGCGCGTCGTCC
TTCCCCTTCAGCCAGCTGGAGGAGGCCCTCGGTCCTCACGTAGAACCCGC
CGAATCCCCTTCCTTGGCCGCCACAGTCTCGCTGGAGAAAGGGAGCGCGG
TGGAGAATTGCGCGGACGTGACCGTCGACACCGAGACCCCCTTTCAGCTT
CGGGCGGCGCAGTCGCTTCTCGGCAGCGATTGCGGCAGAGGGGCAAGAGA
AGGAGGGGGAGGAAGCGCGGAAGGAGCACCCCTCCGTCAGAACGGCGCTG
GAGAAAGGGAGCGCGGTGGAGAATTGCGCGGACGTGACCGTCGACACCGA
GACCCCCTTTCAGCTTCGGGCGGCGCAGTCGCTTCTCGGCAGCGATTGCG
GCAGAGGGGCAAGAGAAGGAGGGGGAGGAAGCGCGGAAGGAGCACCCCTC
CGTCAGAACGGC back to top
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