prot_E-fasciculatus_F_contig12624.2012.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12624.2012.1
Unique Nameprot_E-fasciculatus_F_contig12624.2012.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length63
Homology
BLAST of mRNA_E-fasciculatus_F_contig12624.2012.1 vs. uniprot
Match: D7FPM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPM0_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 3.110e-34
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0
Query:    1 EAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQVGV 63
            EAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQ  V
Sbjct:    9 EAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATV 71          
BLAST of mRNA_E-fasciculatus_F_contig12624.2012.1 vs. uniprot
Match: A0A835YTI9_9STRA (Ribosomal protein L11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTI9_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.400e-30
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0
Query:    1 EAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQVGV 63
            E +YV+LRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQK+T +WKGLPITVKLTI+NRQ  V
Sbjct:   10 EEKYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKSTMDWKGLPITVKLTIVNRQATV 72          
BLAST of mRNA_E-fasciculatus_F_contig12624.2012.1 vs. uniprot
Match: F0Y134_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y134_AURAN)

HSP 1 Score: 99.0 bits (245), Expect = 7.700e-25
Identity = 44/61 (72.13%), Postives = 55/61 (90.16%), Query Frame = 0
Query:    3 QYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQVGV 63
            +YVI+RA+GGEVG+ ++LAPK+GPLGLSPKK+GEDIQK T +WKG+ +TVKLTIINRQ  V
Sbjct:   11 KYVIMRAVGGEVGSASSLAPKIGPLGLSPKKVGEDIQKATMDWKGMNVTVKLTIINRQATV 71          
BLAST of mRNA_E-fasciculatus_F_contig12624.2012.1 vs. uniprot
Match: A0A7M5V2G4_9CNID (60S ribosomal protein L12 n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5V2G4_9CNID)

HSP 1 Score: 97.1 bits (240), Expect = 4.390e-24
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 0
Query:    4 YVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQVGV 63
            YV LRA+GGEVG T+ALAPK+GPLGLSPKK+G+DI KNT +WKGL ITVKLTI NRQ  +
Sbjct:   12 YVCLRAVGGEVGATSALAPKIGPLGLSPKKVGDDIAKNTADWKGLKITVKLTIQNRQAKI 71          
BLAST of mRNA_E-fasciculatus_F_contig12624.2012.1 vs. uniprot
Match: A0A075B0J9_ROZAC (60S ribosomal protein L12 n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B0J9_ROZAC)

HSP 1 Score: 96.7 bits (239), Expect = 6.220e-24
Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    1 EAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQVGV 63
            E + ++LR +GGEVGNT+ALAPKLGPLGLSPKK+GEDI K +QEWKGL IT KLTI NRQ  V
Sbjct:    9 EVKILVLRTVGGEVGNTSALAPKLGPLGLSPKKVGEDIAKVSQEWKGLRITAKLTIQNRQATV 71          
BLAST of mRNA_E-fasciculatus_F_contig12624.2012.1 vs. uniprot
Match: A0A261Y1F7_9FUNG (60S ribosomal protein L12 n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y1F7_9FUNG)

HSP 1 Score: 96.3 bits (238), Expect = 8.800e-24
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    1 EAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQVGV 63
            E + + LRA GGEVG+++ALAPK+GPLGLSPKK+GEDI KNTQ+WKG+ +TVKLTI NRQ  V
Sbjct:    9 EVKVIYLRATGGEVGSSSALAPKIGPLGLSPKKVGEDIAKNTQDWKGIKVTVKLTIQNRQAQV 71          
BLAST of mRNA_E-fasciculatus_F_contig12624.2012.1 vs. uniprot
Match: A0A7R9BL92_9CRUS (60S ribosomal protein L12 n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BL92_9CRUS)

HSP 1 Score: 96.3 bits (238), Expect = 8.800e-24
Identity = 48/63 (76.19%), Postives = 51/63 (80.95%), Query Frame = 0
Query:    1 EAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQVGV 63
            E + V LRA GGEVG TA LAPK+GPLGLSPKK+GEDI K TQEWKGL ITVKLTI NRQ  V
Sbjct:    9 EVKIVYLRATGGEVGATATLAPKIGPLGLSPKKVGEDIAKATQEWKGLRITVKLTIQNRQAAV 71          
BLAST of mRNA_E-fasciculatus_F_contig12624.2012.1 vs. uniprot
Match: M1T3E6_CERLA (60S ribosomal protein L12 n=1 Tax=Cerebratulus lacteus TaxID=6221 RepID=M1T3E6_CERLA)

HSP 1 Score: 96.3 bits (238), Expect = 8.800e-24
Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    1 EAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQVGV 63
            E + V+LRA+GGEVG T+ LAPK+GPLGLSPKK+G+DI K TQEWKGL ITVKLTI NRQ  V
Sbjct:    9 EIKIVVLRAVGGEVGATSTLAPKIGPLGLSPKKVGDDIAKATQEWKGLKITVKLTIQNRQATV 71          
BLAST of mRNA_E-fasciculatus_F_contig12624.2012.1 vs. uniprot
Match: A0A7S2UAZ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAZ7_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.720e-23
Identity = 41/63 (65.08%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    1 EAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQVGV 63
            + Q VI+R +GGEVG+ ++LAPK+GPLGLSPKK+GEDIQK T +WKG+ +TVKLT++NRQ  V
Sbjct:    8 DVQIVIMRTVGGEVGSASSLAPKIGPLGLSPKKVGEDIQKATMDWKGMNVTVKLTVVNRQATV 70          
BLAST of mRNA_E-fasciculatus_F_contig12624.2012.1 vs. uniprot
Match: A0A7S1XKH5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKH5_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 2.480e-23
Identity = 43/63 (68.25%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    1 EAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQVGV 63
            E + V++RAIGGEVG+ A+LAPKLGPLGLSPKK+GEDI+K T +WKGL +TVKL ++NRQ  V
Sbjct:   37 EEKIVVMRAIGGEVGSAASLAPKLGPLGLSPKKVGEDIKKATMDWKGLSVTVKLVVVNRQATV 99          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12624.2012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPM0_ECTSI3.110e-3496.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTI9_9STRA1.400e-3085.71Ribosomal protein L11 n=1 Tax=Tribonema minus TaxI... [more]
F0Y134_AURAN7.700e-2572.13Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]
A0A7M5V2G4_9CNID4.390e-2475.0060S ribosomal protein L12 n=1 Tax=Clytia hemisphae... [more]
A0A075B0J9_ROZAC6.220e-2473.0260S ribosomal protein L12 n=1 Tax=Rozella allomyci... [more]
A0A261Y1F7_9FUNG8.800e-2469.8460S ribosomal protein L12 n=1 Tax=Bifiguratus adel... [more]
A0A7R9BL92_9CRUS8.800e-2476.1960S ribosomal protein L12 n=1 Tax=Notodromas monac... [more]
M1T3E6_CERLA8.800e-2473.0260S ribosomal protein L12 n=1 Tax=Cerebratulus lac... [more]
A0A7S2UAZ7_9STRA1.720e-2365.08Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1XKH5_9STRA2.480e-2368.25Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020784Ribosomal protein L11, N-terminalPFAMPF03946Ribosomal_L11_Ncoord: 2..60
e-value: 1.7E-20
score: 72.6
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilyGENE3D3.30.1550.10coord: 1..63
e-value: 2.7E-26
score: 93.5
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilySUPERFAMILY54747Ribosomal L11/L12e N-terminal domaincoord: 3..60
IPR000911Ribosomal protein L11/L12PANTHERPTHR1166160S RIBOSOMAL PROTEIN L12coord: 3..61
NoneNo IPR availablePANTHERPTHR11661:SF14GENE, 16519-RELATEDcoord: 3..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12624contigE-fasciculatus_F_contig12624:628..816 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12624.2012.1mRNA_E-fasciculatus_F_contig12624.2012.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12624 628..816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12624.2012.1 ID=prot_E-fasciculatus_F_contig12624.2012.1|Name=mRNA_E-fasciculatus_F_contig12624.2012.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=63bp
EAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPI
TVKLTIINRQVGV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000911Ribosomal_L11/L12
IPR036796Ribosomal_L11/L12_N_sf
IPR020784Ribosomal_L11_N