mRNA_E-fasciculatus_F_contig1261.2004.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1261.2004.1 vs. uniprot
Match: A0A6H5JYJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ7_9PHAE) HSP 1 Score: 259 bits (662), Expect = 1.750e-86 Identity = 121/127 (95.28%), Postives = 124/127 (97.64%), Query Frame = 1
Query: 4 QPFPTMYWLSCPSLKAAVSQLENQGLILEWERRLQADPAIMADMEAAHKSYAEERWSLLSAEDADTIKRQGWEKSFANGVAGIVQPRHIKCLHTHLAHFLATGRNVVGKWTQEALDAGRHLPVAEDG 384
QPFPTMYWLSCPSLKAAVSQLENQGLILEWERRLQADP IMADMEAAHKSYAEERWSLLSAED DTIKRQGWEKSF+NGVAGIVQPRHIKCLHTH AHFLATGRNVVGKWTQEALDAG+HLPVA+DG
Sbjct: 80 QPFPTMYWLSCPSLKAAVSQLENQGLILEWERRLQADPGIMADMEAAHKSYAEERWSLLSAEDVDTIKRQGWEKSFSNGVAGIVQPRHIKCLHTHFAHFLATGRNVVGKWTQEALDAGKHLPVAKDG 206
BLAST of mRNA_E-fasciculatus_F_contig1261.2004.1 vs. uniprot
Match: A0A7S3YI93_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YI93_HETAK) HSP 1 Score: 129 bits (323), Expect = 8.390e-35 Identity = 61/116 (52.59%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 4 QPFPTMYWLSCPSLKAAVSQLENQGLILEWERRLQADPAIMADMEAAHKSYAEERWSLLSAEDADTIKRQGWEKSFAN-GVAGIVQPRHIKCLHTHLAHFLATGRNVVGKWTQEAL 348
QPFPT+YWL C LKA VS+LE G I E+++RL + + ME AH+ Y E+RWSLLS + D I+ +GW ++F N GV G+ +KCLH HLAH LATGRN VG W E L
Sbjct: 104 QPFPTIYWLCCQELKARVSELERVGKIEEFQQRLNENAEYIKQMEEAHRQYEEKRWSLLSEAELDKIRARGWTRAFENVGVGGLRHFAKVKCLHMHLAHHLATGRNPVGAWVHEEL 219
BLAST of mRNA_E-fasciculatus_F_contig1261.2004.1 vs. uniprot
Match: A0A6G0NZP4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6G0NZP4_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.970e-34 Identity = 58/118 (49.15%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 4 QPFPTMYWLSCPSLKAAVSQLENQGLILEWERRLQADPAIMADMEAAHKSYAEERWSLLSAEDADTIKRQGWEKSFAN-GVAGIVQPRHIKCLHTHLAHFLATGRNVVGKWTQEALDA 354
+PFPT+YWLS LKA VS LE+Q L+L +RRL AD M+ +H+ YAE+RW +++ D + +K + WE + G+AGI + ++KCLHTH AH+LATG N+VG+W QE LD+
Sbjct: 90 EPFPTIYWLSSTELKARVSALEDQQLVLALQRRLDADDPAKQKMKQSHREYAEQRWLMMTPRDLELVKGRRWEFFLRDVGIAGIREYTNVKCLHTHYAHYLATGNNLVGEWVQELLDS 207
BLAST of mRNA_E-fasciculatus_F_contig1261.2004.1 vs. uniprot
Match: A0A3R7HVX3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HVX3_9STRA) HSP 1 Score: 127 bits (319), Expect = 2.510e-34 Identity = 57/118 (48.31%), Postives = 81/118 (68.64%), Query Frame = 1
Query: 4 QPFPTMYWLSCPSLKAAVSQLENQGLILEWERRLQADPAIMADMEAAHKSYAEERWSLLSAEDADTIKRQGWEKSFAN-GVAGIVQPRHIKCLHTHLAHFLATGRNVVGKWTQEALDA 354
+PFPT+YWL+ LKA VS LE++ ++E +RRL+AD A M H+ YAE+RW +L+ D +K +GWE + G+AGI ++KCLHTH AH+LATG N++G+W QE LD+
Sbjct: 86 EPFPTIYWLASTELKARVSTLEDEQYVMELQRRLEADEASKEKMAQNHREYAEQRWRMLTEHDLGVVKGRGWEFVLRDVGIAGIRDFTNVKCLHTHYAHYLATGNNLIGEWVQELLDS 203
BLAST of mRNA_E-fasciculatus_F_contig1261.2004.1 vs. uniprot
Match: G4ZX89_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZX89_PHYSP) HSP 1 Score: 126 bits (317), Expect = 4.890e-34 Identity = 57/117 (48.72%), Postives = 81/117 (69.23%), Query Frame = 1
Query: 4 QPFPTMYWLSCPSLKAAVSQLENQGLILEWERRLQADPAIMADMEAAHKSYAEERWSLLSAEDADTIKRQGWEKSFAN-GVAGIVQPRHIKCLHTHLAHFLATGRNVVGKWTQEALD 351
+PFPT+YWL+ LKA VS LE+Q +L + RL AD A M+ +H+ YAE+RW +++A D + +K + WE + G+AGI + ++KCLHTH AH+LATG N+VG+W QE LD
Sbjct: 85 EPFPTIYWLASTELKARVSALEDQQFVLTLQHRLDADEAAKQRMKESHREYAEQRWRMMTAHDLELVKGRRWEFFLRDVGIAGIREYTNVKCLHTHYAHYLATGNNLVGEWVQELLD 201
BLAST of mRNA_E-fasciculatus_F_contig1261.2004.1 vs. uniprot
Match: W2QG84_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2QG84_PHYPN) HSP 1 Score: 122 bits (307), Expect = 1.170e-32 Identity = 55/118 (46.61%), Postives = 79/118 (66.95%), Query Frame = 1
Query: 4 QPFPTMYWLSCPSLKAAVSQLENQGLILEWERRLQADPAIMADMEAAHKSYAEERWSLLSAEDADTIKRQGWEKSFAN-GVAGIVQPRHIKCLHTHLAHFLATGRNVVGKWTQEALDA 354
+PFPT+YWL+ LKA VS LE+Q +L + RL D A M +H+ YAE+RW++++A D + +K + WE + G+AGI ++KCLHTH AH+LATG N +G+W QE LD+
Sbjct: 81 EPFPTIYWLASTELKARVSTLEDQQYVLSLQHRLDTDEAAKEKMAQSHREYAEQRWNMMTAHDLELVKGRCWEFVLRDVGIAGIRDFTNVKCLHTHYAHYLATGNNQIGEWVQELLDS 198
BLAST of mRNA_E-fasciculatus_F_contig1261.2004.1 vs. uniprot
Match: H3HCG6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCG6_PHYRM) HSP 1 Score: 122 bits (305), Expect = 1.700e-32 Identity = 55/118 (46.61%), Postives = 80/118 (67.80%), Query Frame = 1
Query: 4 QPFPTMYWLSCPSLKAAVSQLENQGLILEWERRLQADPAIMADMEAAHKSYAEERWSLLSAEDADTIKRQGWEKSFAN-GVAGIVQPRHIKCLHTHLAHFLATGRNVVGKWTQEALDA 354
+PFPT+YWL+ LKA VS LE+Q +L + RL AD A M +H+ YAE+RW +++ D + +K + WE + G+AGI + ++KCLHTH AH+LATG N+VG+W QE L++
Sbjct: 62 EPFPTIYWLASTELKARVSTLEDQQYVLTLQHRLDADEAAKEKMAQSHREYAEQRWRMMTPHDRELVKGRRWEFFLRDVGIAGIREFTNVKCLHTHYAHYLATGNNLVGEWVQELLNS 179
BLAST of mRNA_E-fasciculatus_F_contig1261.2004.1 vs. uniprot
Match: D0NKV2_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NKV2_PHYIT) HSP 1 Score: 120 bits (302), Expect = 6.640e-32 Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 1
Query: 4 QPFPTMYWLSCPSLKAAVSQLENQGLILEWERRLQADPAIMADMEAAHKSYAEERWSLLSAEDADTIKRQGWEKSFAN-GVAGIVQPRHIKCLHTHLAHFLATGRNVVGKWTQEALD 351
+PFPT+YWL+ LKA VS LE+Q +L + RL D A M +H+ YAE+RW++++ D + +K + WE + G+AGI ++KCLHTH AH+LATG N +G+W QE LD
Sbjct: 81 EPFPTIYWLASAELKARVSTLEDQQFVLSLQHRLDTDQAAKERMAQSHREYAEQRWNMMTPHDLELVKGRRWEFVLRDVGIAGIRDFTNVKCLHTHYAHYLATGNNQIGEWVQELLD 197
BLAST of mRNA_E-fasciculatus_F_contig1261.2004.1 vs. uniprot
Match: A0A0P1A8J7_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8J7_PLAHL) HSP 1 Score: 120 bits (302), Expect = 9.110e-32 Identity = 55/117 (47.01%), Postives = 80/117 (68.38%), Query Frame = 1
Query: 4 QPFPTMYWLSCPSLKAAVSQLENQGLILEWERRLQADPAIMADMEAAHKSYAEERWSLLSAEDADTIKRQGWEKSFAN-GVAGIVQPRHIKCLHTHLAHFLATGRNVVGKWTQEALD 351
+PFPT+YWL+ LKA VS LE+Q +L ++RL AD + M +H+ YAE+RW +++A D I+ + WE + G+AGI + ++KCLHTH AH+LATG N++G+W QE LD
Sbjct: 84 EPFPTIYWLASTELKAKVSILEDQQYVLMLQQRLDADQSARERMVQSHREYAEQRWHMMTAHDLKLIQHRRWEFVLRDVGIAGIREFTNVKCLHTHYAHYLATGNNLIGEWVQELLD 200
BLAST of mRNA_E-fasciculatus_F_contig1261.2004.1 vs. uniprot
Match: A0A2P4Y3U7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3U7_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.480e-31 Identity = 54/118 (45.76%), Postives = 77/118 (65.25%), Query Frame = 1
Query: 4 QPFPTMYWLSCPSLKAAVSQLENQGLILEWERRLQADPAIMADMEAAHKSYAEERWSLLSAEDADTIKRQGWEKSFAN-GVAGIVQPRHIKCLHTHLAHFLATGRNVVGKWTQEALDA 354
+PFPT+YWL+ LKA VS LE+Q +L + RL D A M +H+ YAE+RW +++ D + +K + WE + G+AGI ++KCLHTH AH+LATG N +G+W QE LD+
Sbjct: 79 EPFPTIYWLASTELKARVSTLEDQQYVLSLQHRLDTDEAAKEKMAQSHREYAEQRWRMMTQHDLNLVKGRHWEFVLRDVGIAGIRDFTNVKCLHTHYAHYLATGNNQIGEWVQELLDS 196 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1261.2004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1261.2004.1 >prot_E-fasciculatus_F_contig1261.2004.1 ID=prot_E-fasciculatus_F_contig1261.2004.1|Name=mRNA_E-fasciculatus_F_contig1261.2004.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=123bp MYWLSCPSLKAAVSQLENQGLILEWERRLQADPAIMADMEAAHKSYAEERback to top mRNA from alignment at E-fasciculatus_F_contig1261:15547..16373- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1261.2004.1 ID=mRNA_E-fasciculatus_F_contig1261.2004.1|Name=mRNA_E-fasciculatus_F_contig1261.2004.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=827bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1261:15547..16373- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1261:15547..16373- >mRNA_E-fasciculatus_F_contig1261.2004.1 ID=mRNA_E-fasciculatus_F_contig1261.2004.1|Name=mRNA_E-fasciculatus_F_contig1261.2004.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=738bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1261:15547..16373- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |