mRNA_E-fasciculatus_F_contig12603.1997.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12603.1997.1
Unique NamemRNA_E-fasciculatus_F_contig12603.1997.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 6.890e-121
Identity = 188/223 (84.30%), Postives = 202/223 (90.58%), Query Frame = 1
Query:    1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKI---SRAVKGGFAEVEGGINNLKGEL 660
            AFS SWKIFLGVPPGA+EKVLTRCCGLGGVRTFWRYGVLVHG LGVQD RRTFA+VLEYSS DNELTA+IFGDISTPA WVALSYVMSAVRLMLVDFPGLR KGSLKCPQH + MLF + A  GGDKLLEGSRCP+CSVDTGGLGAAAIDLVRFVDIR DRDVIF +VKARFDDL+SQYS + PTDPS+EE ELIRKI   + AVKGGFAEVEGG++NLKGE+
Sbjct:  485 AFSASWKIFLGVPPGAVEKVLTRCCGLGGVRTFWRYGVLVHGSLGVQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDMARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNDVKARFDDLDSQYSLSCPTDPSQEEGELIRKIDDVATAVKGGFAEVEGGVSNLKGEM 707          
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 3.480e-110
Identity = 173/224 (77.23%), Postives = 190/224 (84.82%), Query Frame = 1
Query:    1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKISRAVKGGFAEVEGGINNLKGELKGGF 672
            AFS SWKIFLGVPPGA+EKVLTRCCGLG VRTFWRYGVLVHG  G QD RRTFA+VLEYSS DNELTA+IFGDISTPA WVALSYVMSAV+LML+DFPGLR KGSLKCP+H + MLF +KA  GGDKLLEGSRCP+CSVDTGGLGAAAIDLVRFVDIR DRDVIF EVKARFDDL+SQYS + PTDPS+EE ELIRKI         +V   + ++K E+K GF
Sbjct:  346 AFSASWKIFLGVPPGAVEKVLTRCCGLGVVRTFWRYGVLVHGSFGAQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVKLMLMDFPGLRWKGSLKCPEHGDAMLFVDKARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFKEVKARFDDLDSQYSLSCPTDPSQEEGELIRKID--------DVARAVRSVKKEMKDGF 561          
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: A0A6H5L0H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H4_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 3.010e-109
Identity = 180/225 (80.00%), Postives = 186/225 (82.67%), Query Frame = 1
Query:    1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPT-DPSKEEDELIRKISRAVKGGFAEVEGGINNLKGELKGGF 672
            AFS SWKIFLGVPPGAIEKVLTRCCGLG VRTFWRYGVLVHGGLGVQD R TFA+VLEYSS  NELTAQIFG ISTPA WVALSYVMSAVRLMLVDFPGLR KGSLKCPQH + M F N A S GDKLLEGSRCP CS DTGGLG AAIDLVR VDIR +RDVIF  VKARFDDLESQYSFT PT D SKEE ELIRKI     G    V+G IN +KGE+K GF
Sbjct:  312 AFSASWKIFLGVPPGAIEKVLTRCCGLGRVRTFWRYGVLVHGGLGVQDGRSTFAVVLEYSSAGNELTAQIFGGISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMPFVNMARSDGDKLLEGSRCPHCSEDTGGLGEAAIDLVRLVDIRLNRDVIFNGVKARFDDLESQYSFTLPTHDRSKEEGELIRKID----GVATAVQGAINEVKGEMKEGF 532          
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 1.260e-101
Identity = 170/213 (79.81%), Postives = 182/213 (85.45%), Query Frame = 1
Query:    1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPT-DPSKEEDELIRKI---SRAVKGGFAEV 627
            AF  SWKIFLGVPPGAIEKVLTRCCGLGGV+TFWRYGVLVHGGLGVQDERRTFA+V+EYSS DNEL AQIFGD+STP  W A SYVMSAV LMLVDFPGL  KG L+CPQH + MLF NKA+  GDK LEGSRCP+CS DTGGLGAAAIDL+RFVDIR DRDVIF EVKARF+DLESQYSFT PT D SKEE ELIRKI   + AV+G F EV
Sbjct:  798 AFRASWKIFLGVPPGAIEKVLTRCCGLGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELIAQIFGDVSTPGPWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGDGMLFVNKATRDGDKFLEGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLESQYSFTCPTHDRSKEESELIRKIDGMATAVQGAFNEV 1010          
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 4.910e-90
Identity = 157/236 (66.53%), Postives = 177/236 (75.00%), Query Frame = 1
Query:    1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKISR---AVKGGFAEVEG-------GINNLKGELKGGFNE 678
            AFS SWKIFLGVPPGAIEKVLTRCC LGGVRTFWR  V VHGG G Q     FA+VLEYSS +NELTA+IFGDISTP  W+ALSYVMSAV LM+ DFPGLR +GSLKCPQH + ML   K    GDK LEGSRCP+CS DT GLGAAAIDLVR VDIR DRD IF EVK RF DLE +YSF+ P   SK E+ LI+KI     AV GGF E++G       G+ ++KG ++GGF+E
Sbjct:  722 AFSASWKIFLGVPPGAIEKVLTRCCNLGGVRTFWRSAVFVHGGHGYQGGHEMFAVVLEYSSANNELTAKIFGDISTPTPWMALSYVMSAVSLMMRDFPGLRSRGSLKCPQHGDAMLLATKVPRPGDKFLEGSRCPQCSADTRGLGAAAIDLVRMVDIRLDRDEIFHEVKERFVDLEGRYSFSSPAGSSKGENLLIQKIDGVAIAVHGGFNEMKGEANGIRAGLGDVKGXIRGGFHE 957          
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 1.750e-88
Identity = 151/220 (68.64%), Postives = 173/220 (78.64%), Query Frame = 1
Query:    1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKISRAVKGGFAEVEGGINNLKGEL 660
            AFS SWKIFLGVP GAIEKVLTRCC LGGV+TFWR GVLVHGGLG +D    FA+VLEYSS+DNELTAQIFGDISTPA WVALSYV+SAVRLML+DFPGLR +GSLKCPQH + ML  NK +  G KLLE S CP+CS DT GLGAAAIDLV  VDIR DRDVIF +VK RF +LESQYSF+     S +ED LI+K+    +     ++ G+++LKG L
Sbjct:  694 AFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKMTQAGVKLLEPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELESQYSFSSSAASSNDEDVLIQKMEEVAR----TLKDGLDDLKGRL 909          
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 1.840e-88
Identity = 154/198 (77.78%), Postives = 164/198 (82.83%), Query Frame = 1
Query:    1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKI 594
            AFS SW+IFLGVPPGAIEKVLTRCCGLG V+TFWRYGVLVHGGLG  D R  FA+V+EYSS DNELTAQIFGDISTPA WVALSYVMSAV LMLVDFPGLR KG LKCPQH NEM F NK +  GDK LE  +CP+CS +T GLGAAAIDLV  VDIR DRDVIF EVKARF  LESQY F+ PT  SK EDEL+RKI
Sbjct:  864 AFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVVEYSSTDNELTAQIFGDISTPAPWVALSYVMSAVSLMLVDFPGLRWKGCLKCPQHGNEMPFANKVNRAGDKFLE-RKCPRCSPETRGLGAAAIDLVCLVDIRLDRDVIFREVKARFVVLESQY-FSCPTGSSKTEDELLRKI 1059          
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 4.390e-88
Identity = 151/224 (67.41%), Postives = 171/224 (76.34%), Query Frame = 1
Query:    1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKISR---AVKGGFAEVEGGINNLKGELK 663
            AF+ +WKIFLGVPPGAIEKVLTRCC LGGV+ FWR GVLVHGGLG +D    FA VLEYSS +N LTAQIFGD S  A WVALSYVMSAV LML+DFPGLR +GSLKCPQH + +L  NK +  GDK L GSRC +CS DT  LGAAAIDLVR V++R DRDVIF EVK RF +LE QY F  P   SKEED LIRKI+    AV GGFAE + G+  +KGE++
Sbjct: 1030 AFNATWKIFLGVPPGAIEKVLTRCCSLGGVQIFWRNGVLVHGGLGDEDGYGIFAAVLEYSSAENGLTAQIFGDTSFSAAWVALSYVMSAVSLMLLDFPGLRWRGSLKCPQHGDTILLTNKVTRAGDKFLAGSRCQQCSADTRALGAAAIDLVRMVNVRLDRDVIFREVKERFVELEGQYVFPSPVGSSKEEDLLIRKINEVTIAVNGGFAETKAGLGEVKGEIE 1253          
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 5.580e-87
Identity = 148/219 (67.58%), Postives = 172/219 (78.54%), Query Frame = 1
Query:    1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRK---ISRAVKGGFAEVEGGINNL 648
            A   SWKIFLGVP GAIEKVLTRCC LGGV+TFWR GVLVHGG+G QD    FA+VLEYS +DNELTAQIFGDISTPA WVALSYV+SAV LML+DFPGLR +GSLKCPQH + M   N  +  GDK+LEGSRC +CS DT GLGAAAIDLVR VDIR DRDVIF EVKARF DLE QYSF+  T  S +E  L++K   ++R +K GF +++G ++ +
Sbjct:  794 ALRASWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGVGEQDRSGIFAVVLEYSPSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGDAMPLANMVTRTGDKILEGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLEGQYSFSSSTASSNDEGVLVQKMEEVARTLKDGFDDLKGRLSKV 1012          
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 7.630e-83
Identity = 145/198 (73.23%), Postives = 156/198 (78.79%), Query Frame = 1
Query:    1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKI 594
            AFS SW+IFLGVPPGAIEKVLTRCCGLG V+TFWRYGVLVHGGLG  D R  FA+V EYSS +NELTAQIFGDIST A WVALSYV SAV LML+DFPGLR  GSLKCPQH  EM F  K +  GDK LE  RCP+CS  T GLGAAAIDL+R VDIR DR VI  EVKARFD LESQY FT P   S +EDE +RK+
Sbjct:  580 AFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKVNCAGDKFLE-RRCPRCSPQTRGLGAAAIDLIRMVDIRLDRGVIDREVKARFDVLESQY-FTCPAGSSTDEDEFVRKM 775          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1K4_9PHAE6.890e-12184.30Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K516_9PHAE3.480e-11077.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0H4_9PHAE3.010e-10980.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJS7_ECTSI1.260e-10179.81LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUC3_ECTSI4.910e-9066.53LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUC9_ECTSI1.750e-8868.64LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LF46_ECTSI1.840e-8877.78LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LCS7_ECTSI4.390e-8867.41LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUD0_ECTSI5.580e-8767.58LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FZA1_ECTSI7.630e-8373.23LRR-GTPase of the ROCO family, incomplete sequence... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12603contigE-fasciculatus_F_contig12603:483..3941 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score335.1
Seed ortholog evalue2.5e-89
Seed eggNOG ortholog2880.D8LJS7
KEGG rclassRC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248
KEGG koko:K01188
KEGG ReactionR00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040
KEGG Pathwayko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110
GOsGO:0000003,GO:0003002,GO:0003006,GO:0003674,GO:0004857,GO:0007275,GO:0007389,GO:0008150,GO:0009791,GO:0009908,GO:0022414,GO:0030234,GO:0032501,GO:0032502,GO:0043086,GO:0044092,GO:0048367,GO:0048608,GO:0048731,GO:0048832,GO:0048833,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0061458,GO:0065007,GO:0065009,GO:0090567,GO:0098772
EggNOG OGs2CYK8@1,2S4YE@2759
EC3.2.1.21
CAZyGH1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons4
Model size680
Cds size678
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12603.1997.1prot_E-fasciculatus_F_contig12603.1997.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12603 483..3941 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927769.2033815-CDS-E-fasciculatus_F_contig12603:482..6051622927769.2033815-CDS-E-fasciculatus_F_contig12603:482..605Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12603 483..605 -
1695995685.920811-CDS-E-fasciculatus_F_contig12603:482..6051695995685.920811-CDS-E-fasciculatus_F_contig12603:482..605Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12603 483..605 -
1622927769.215997-CDS-E-fasciculatus_F_contig12603:1425..14961622927769.215997-CDS-E-fasciculatus_F_contig12603:1425..1496Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12603 1426..1496 -
1695995685.939715-CDS-E-fasciculatus_F_contig12603:1425..14961695995685.939715-CDS-E-fasciculatus_F_contig12603:1425..1496Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12603 1426..1496 -
1622927769.2270105-CDS-E-fasciculatus_F_contig12603:2775..28991622927769.2270105-CDS-E-fasciculatus_F_contig12603:2775..2899Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12603 2776..2899 -
1695995685.9541397-CDS-E-fasciculatus_F_contig12603:2775..28991695995685.9541397-CDS-E-fasciculatus_F_contig12603:2775..2899Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12603 2776..2899 -
1622927769.2420943-CDS-E-fasciculatus_F_contig12603:3581..39411622927769.2420943-CDS-E-fasciculatus_F_contig12603:3581..3941Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12603 3582..3941 -
1695995685.9645247-CDS-E-fasciculatus_F_contig12603:3581..39411695995685.9645247-CDS-E-fasciculatus_F_contig12603:3581..3941Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12603 3582..3941 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12603.1997.1

>prot_E-fasciculatus_F_contig12603.1997.1 ID=prot_E-fasciculatus_F_contig12603.1997.1|Name=mRNA_E-fasciculatus_F_contig12603.1997.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=226bp
AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDER
RTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGL
RCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAID
LVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKISR
AVKGGFAEVEGGINNLKGELKGGFNE
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mRNA from alignment at E-fasciculatus_F_contig12603:483..3941-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12603.1997.1 ID=mRNA_E-fasciculatus_F_contig12603.1997.1|Name=mRNA_E-fasciculatus_F_contig12603.1997.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3459bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12603:483..3941- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCATTCAGCGTCAGTTGGAAGATCTTTCTCGGTGTACCGCCTGGTGCGAT CGAAAAGGTGCTCACGAGGTGCTGCGGTCTTGGTGGTGTGCGAACATTCT GGCGATATGGGGTGCTCGTGCATGGCGGCCTCGGCGTCCAGGATGAGCGC AGGACGTTTGCTTTGGTATTAGAATATTCATCCAACGACAATGAGCTTAC TGCTCAGATTTTCGGCGATATCAGCACCCCAGCTGTGTGGGTGGCACTGT CATACGTCATGTCGGCCGTAAGACTGATGCTGGTGGATTTTCCAGGACTA CGTTGTAAGGGCTCGCTGAAGTGTCCTCAGCATGACAACGAGATGCTCTT CAACAACAAGGTAAGCCCTCTCAACACGCGTGTACTCTGCAGACCGATGG GTACCCCAGCACGGGTACACTTCTGGTCGCTCGAGTCGCCCGGTCCTGGG TACAATCGATCCCGTATGGGTTTGCTGTTGTGTATTCGTGCACTCGGTAT TGGTATCTTGTGACCATTTCCCATCATGGTGCTCTGGAAATGCAGTGTCT GGAGCATTTTCCTCTCTGTAGCGCCGTTTCCAGCAATCCCTCTACGTAGG TGTAACTCTTGGAAGTGGGAGCATAGAAACCTTCACTAGTGCGACGCACC GGGAGAGTTTAGTAGTGTCATAATCGCCAAGGTTCTTATCGTACTGCGCT GGTTGTCTTGTGTGGCTAGTATCTTTGCCATTTGAATGTCTTCCAGAAGC GCAGCGATGCATCAGTAGAAGCATTGACTGCATGAATATGAGTTTCAATT TCACGTTTGTTTTCTAGTTCAATGGGTGTGTACGAGTGCGTCGGCATATG CTGTTGTGTTTGACATGTTGGTTTTCAATGTTTTTGCTGCTACTGTGCCT CACGTCCGGTGTTTCTCTTGGCTTTCAAAACAGCCTTATGAATAGGACGT GTAGGTGTTCGAGGCGATGCTCGGGTCAAGATGCGAGCTCAAACTATCAA CCCACCACATTAACGGGAAACGTGTTGCATCCCGCGTGTCAGGCGAGTAG CGGTGGAGACAAGCTTCTGGAAGGCAGTAGATGCCCAAAATGCAGTGTAG ACACCGGCGGGCTCGGGGCAGCGGCCATCGATCTCGTGCGTTTCGTCGAC ATCCGACAGGACCGAGGTATGCACGACCAATGAGGAGGCCGTACAAGTGC GAGTGGGTGCACAAGTGTGCTATTTGTGTTTTGCCCCCCTGCGATGGCTG CCACTTGTGCGATCGCTGCCACCCCAACGGCAGTTGGATTCAATCGTTCG ATTCTGCTAGTCTCACGCACACCCCTACCCGATAGGTCCAATCTGTGCCA TACTGAGTGAGATCGCATCAGCTCCAGTACTCGTGGATTTTCTTACTGCT GTGACCCCTGTACGATATGGTCACTCTCTGCGATACTGAACAAATCACAA CGGGCGACCGGTACCATTTGAATATTACCTGTGTACTGCTGCAACAACCC CGCGAGCGATCCCATATAACAATCGAGCATATGTAATACGAAAAACACTC TTGACACAGAACCCGTAATGCTCGGTAGAGTTGTTCTACGAGTGACGACT AGCATGGTAGACTGAGACTTTGCTTGTGGTGGTGTGCGAAAAACGAAGAA CGGCCGACTCTCTGCTGCAGTTGATCAATTTTTCTTCTGGCTTCATCTTC GCTGTTGGAAGCGTTTAGATCGCAAAATATTTACCGTTTCGTGTGTTTGG TGAGTTCCCAACATTTTTCTCAGGGGGTTAGGTACAAGTATCCTCTTGTT GTTTTACGTGTGTGCTGCCACGCTGCAACGCATACAGTAGTTGCGCCCAA CAGCAAACTATCAGAGCAACACGTGAAACCACTGGTTGCAGCCCACGAGA CTCACTCGCGATGTCACGAACCTCATGGCCGATATGCTACTCGTGTTTTT TTCGCAACCCTGTGCGTCAACTCCGACCCCTACGTGAAAGCGATACGTAG AAAGTATGTATTTTTCAATCCTGTTCGATCGCTTCAACCTGTGCATTGAT TCCTACGGTTTCGGCAATGGTTGGCTACCTGTGTGCTTTTGCCGAATTCA GCGCGAGTTGATTGTCCTCGTTGATCCGGGAGTCCAGCCGTAGGTCTACT GATAGATTGTACAGAGTTGGGGGCACGAGAAGGTACTTCTCTGGCATTGT CTGCGCCTTGGCTGGCTCGTCATCGAGGCTGACTTTCGTGTTAGGAGATC GTTGTACTTGATGTAATGTAAGCAACACGGAGGATTGAATTCGATTGCTC TGTCCCGGTCAAGTTTCGACCGTTTTCGTCACCCCTCACGGGCTACCCAT ATGGCGGCATCCGCATTGCGAGCATCTCGTCTTGAGCAAGAGAATAACTG TTTTGGCATGCTGACCTACGTCTTCCGCTCATTTTCGCATGGCAGATGTG ATTTTTACCGAGGTGAAGGCGAGATTCGACGACCTGGAGAGCCAGTACTC CTTCACTCGTCCGACGGTGAGAACGGATTGCACATTTCAGGTAGTAAAGA ATTGCACAACCGAAGTAGTCGGAGTGCTTTTGCCGCATCATCGCGTGTTT CCGGTATGATCTGGTGGAGAAAAACTGACATCAGAAAAACTGACATCAGT TTTTGAGTTCTTCCAAGGAGACTGTGCCCATTGTGGACCAAAGCGGACGA AACCGCTAGCATCGAGCTCTGGCCTGTTTCGGTGTCGTAGCCTGCGGCGA TTCATTTCGTAGTTGTTGGAGTATCGAGCGACTAACTCACGTTGAGATAA AATGATCTTCTTCTAATGATCTACATTGTTGATTCCTCTCGAAGCCCATC CACCCGTCACCCTCCCCGGGCATTGTCCGACACGATCCGGCGTGTTCGGC GGCGTGTATTTCATTGGTTTGGTCTTGTGTGAGGTAGCGAGAAAAATCGG AGGCGTAATCTCGATGTTGCCGTGTTCTTTTGCTTCTCGCCTGCCGCCTT GTCTGCGCAAGTGTACGGCACCATCACTTTGCAATAGTATGGGCAATAAC GGCAGCAAAAGTCGCTTCTGTGTCGTCTATCAAGACGCCCTCGTTCGGAA AGGGTGTACATTAGGCATATGCTGACACCGCCTATTCCACATTGCAACCA CCTGGCCTTCCTGCCTGGCTCATGGTGTCTCCGCAACGTCTGTGAACCAG GATTGCAGTTCTTCAAAGAAAAAATAGTTCTTTGTCGTCAGGGCACACGT TTGTTGTTACTGCATGCCTTGCTGCTGAGTGTGGGCTGAGTGTGGCCGTC CCGTGCCTGTCGTCGCGTCATGTTTGTACAAAGCAGGATCCTTCCAAGGA GGAGGACGAGTTGATTCGAAAGATCTCCAGAGCTGTGAAAGGGGGATTCG CCGAGGTGGAAGGGGGGATCAATAACTTGAAGGGCGAGCTGAAGGGAGGA TTCAACGAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12603:483..3941-

>mRNA_E-fasciculatus_F_contig12603.1997.1 ID=mRNA_E-fasciculatus_F_contig12603.1997.1|Name=mRNA_E-fasciculatus_F_contig12603.1997.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1356bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12603:483..3941- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCATTCAGCGTCAGTTGGAAGATCTTTCTCGGTGTACCGCCTGGTGCGAT
CGAAAAGGTGCTCACGAGGTGCTGCGGTCTTGGTGGTGTGCGAACATTCT
GGCGATATGGGGTGCTCGTGCATGGCGGCCTCGGCGTCCAGGATGAGCGC
AGGACGTTTGCTTTGGTATTAGAATATTCATCCAACGACAATGAGCTTAC
TGCTCAGATTTTCGGCGATATCAGCACCCCAGCTGTGTGGGTGGCACTGT
CATACGTCATGTCGGCCGTAAGACTGATGCTGGTGGATTTTCCAGGACTA
CGTTGTAAGGGCTCGCTGAAGTGTCCTCAGCATGACAACGAGATGCTCTT
CAACAACAAGGCATTCAGCGTCAGTTGGAAGATCTTTCTCGGTGTACCGC
CTGGTGCGATCGAAAAGGTGCTCACGAGGTGCTGCGGTCTTGGTGGTGTG
CGAACATTCTGGCGATATGGGGTGCTCGTGCATGGCGGCCTCGGCGTCCA
GGATGAGCGCAGGACGTTTGCTTTGGTATTAGAATATTCATCCAACGACA
ATGAGCTTACTGCTCAGATTTTCGGCGATATCAGCACCCCAGCTGTGTGG
GTGGCACTGTCATACGTCATGTCGGCCGTAAGACTGATGCTGGTGGATTT
TCCAGGACTACGTTGTAAGGGCTCGCTGAAGTGTCCTCAGCATGACAACG
AGATGCTCTTCAACAACAAGGCGAGTAGCGGTGGAGACAAGCTTCTGGAA
GGCAGTAGATGCCCAAAATGCAGTGTAGACACCGGCGGGCTCGGGGCAGC
GGCCATCGATCTCGTGCGTTTCGTCGACATCCGACAGGACCGAGGCGAGT
AGCGGTGGAGACAAGCTTCTGGAAGGCAGTAGATGCCCAAAATGCAGTGT
AGACACCGGCGGGCTCGGGGCAGCGGCCATCGATCTCGTGCGTTTCGTCG
ACATCCGACAGGACCGAGATGTGATTTTTACCGAGGTGAAGGCGAGATTC
GACGACCTGGAGAGCCAGTACTCCTTCACTCGTCCGACGATGTGATTTTT
ACCGAGGTGAAGGCGAGATTCGACGACCTGGAGAGCCAGTACTCCTTCAC
TCGTCCGACGGATCCTTCCAAGGAGGAGGACGAGTTGATTCGAAAGATCT
CCAGAGCTGTGAAAGGGGGATTCGCCGAGGTGGAAGGGGGGATCAATAAC
TTGAAGGGCGAGCTGAAGGGAGGATTCAACGAGGATCCTTCCAAGGAGGA
GGACGAGTTGATTCGAAAGATCTCCAGAGCTGTGAAAGGGGGATTCGCCG
AGGTGGAAGGGGGGATCAATAACTTGAAGGGCGAGCTGAAGGGAGGATTC
AACGAG
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