mRNA_E-fasciculatus_F_contig12603.1997.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 375 bits (962), Expect = 6.890e-121 Identity = 188/223 (84.30%), Postives = 202/223 (90.58%), Query Frame = 1
Query: 1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKI---SRAVKGGFAEVEGGINNLKGEL 660
AFS SWKIFLGVPPGA+EKVLTRCCGLGGVRTFWRYGVLVHG LGVQD RRTFA+VLEYSS DNELTA+IFGDISTPA WVALSYVMSAVRLMLVDFPGLR KGSLKCPQH + MLF + A GGDKLLEGSRCP+CSVDTGGLGAAAIDLVRFVDIR DRDVIF +VKARFDDL+SQYS + PTDPS+EE ELIRKI + AVKGGFAEVEGG++NLKGE+
Sbjct: 485 AFSASWKIFLGVPPGAVEKVLTRCCGLGGVRTFWRYGVLVHGSLGVQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDMARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNDVKARFDDLDSQYSLSCPTDPSQEEGELIRKIDDVATAVKGGFAEVEGGVSNLKGEM 707
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE) HSP 1 Score: 343 bits (879), Expect = 3.480e-110 Identity = 173/224 (77.23%), Postives = 190/224 (84.82%), Query Frame = 1
Query: 1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKISRAVKGGFAEVEGGINNLKGELKGGF 672
AFS SWKIFLGVPPGA+EKVLTRCCGLG VRTFWRYGVLVHG G QD RRTFA+VLEYSS DNELTA+IFGDISTPA WVALSYVMSAV+LML+DFPGLR KGSLKCP+H + MLF +KA GGDKLLEGSRCP+CSVDTGGLGAAAIDLVRFVDIR DRDVIF EVKARFDDL+SQYS + PTDPS+EE ELIRKI +V + ++K E+K GF
Sbjct: 346 AFSASWKIFLGVPPGAVEKVLTRCCGLGVVRTFWRYGVLVHGSFGAQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVKLMLMDFPGLRWKGSLKCPEHGDAMLFVDKARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFKEVKARFDDLDSQYSLSCPTDPSQEEGELIRKID--------DVARAVRSVKKEMKDGF 561
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: A0A6H5L0H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H4_9PHAE) HSP 1 Score: 338 bits (868), Expect = 3.010e-109 Identity = 180/225 (80.00%), Postives = 186/225 (82.67%), Query Frame = 1
Query: 1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPT-DPSKEEDELIRKISRAVKGGFAEVEGGINNLKGELKGGF 672
AFS SWKIFLGVPPGAIEKVLTRCCGLG VRTFWRYGVLVHGGLGVQD R TFA+VLEYSS NELTAQIFG ISTPA WVALSYVMSAVRLMLVDFPGLR KGSLKCPQH + M F N A S GDKLLEGSRCP CS DTGGLG AAIDLVR VDIR +RDVIF VKARFDDLESQYSFT PT D SKEE ELIRKI G V+G IN +KGE+K GF
Sbjct: 312 AFSASWKIFLGVPPGAIEKVLTRCCGLGRVRTFWRYGVLVHGGLGVQDGRSTFAVVLEYSSAGNELTAQIFGGISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMPFVNMARSDGDKLLEGSRCPHCSEDTGGLGEAAIDLVRLVDIRLNRDVIFNGVKARFDDLESQYSFTLPTHDRSKEEGELIRKID----GVATAVQGAINEVKGEMKEGF 532
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 330 bits (845), Expect = 1.260e-101 Identity = 170/213 (79.81%), Postives = 182/213 (85.45%), Query Frame = 1
Query: 1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPT-DPSKEEDELIRKI---SRAVKGGFAEV 627
AF SWKIFLGVPPGAIEKVLTRCCGLGGV+TFWRYGVLVHGGLGVQDERRTFA+V+EYSS DNEL AQIFGD+STP W A SYVMSAV LMLVDFPGL KG L+CPQH + MLF NKA+ GDK LEGSRCP+CS DTGGLGAAAIDL+RFVDIR DRDVIF EVKARF+DLESQYSFT PT D SKEE ELIRKI + AV+G F EV
Sbjct: 798 AFRASWKIFLGVPPGAIEKVLTRCCGLGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELIAQIFGDVSTPGPWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGDGMLFVNKATRDGDKFLEGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLESQYSFTCPTHDRSKEESELIRKIDGMATAVQGAFNEV 1010
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI) HSP 1 Score: 297 bits (761), Expect = 4.910e-90 Identity = 157/236 (66.53%), Postives = 177/236 (75.00%), Query Frame = 1
Query: 1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKISR---AVKGGFAEVEG-------GINNLKGELKGGFNE 678
AFS SWKIFLGVPPGAIEKVLTRCC LGGVRTFWR V VHGG G Q FA+VLEYSS +NELTA+IFGDISTP W+ALSYVMSAV LM+ DFPGLR +GSLKCPQH + ML K GDK LEGSRCP+CS DT GLGAAAIDLVR VDIR DRD IF EVK RF DLE +YSF+ P SK E+ LI+KI AV GGF E++G G+ ++KG ++GGF+E
Sbjct: 722 AFSASWKIFLGVPPGAIEKVLTRCCNLGGVRTFWRSAVFVHGGHGYQGGHEMFAVVLEYSSANNELTAKIFGDISTPTPWMALSYVMSAVSLMMRDFPGLRSRGSLKCPQHGDAMLLATKVPRPGDKFLEGSRCPQCSADTRGLGAAAIDLVRMVDIRLDRDEIFHEVKERFVDLEGRYSFSSPAGSSKGENLLIQKIDGVAIAVHGGFNEMKGEANGIRAGLGDVKGXIRGGFHE 957
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 292 bits (747), Expect = 1.750e-88 Identity = 151/220 (68.64%), Postives = 173/220 (78.64%), Query Frame = 1
Query: 1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKISRAVKGGFAEVEGGINNLKGEL 660
AFS SWKIFLGVP GAIEKVLTRCC LGGV+TFWR GVLVHGGLG +D FA+VLEYSS+DNELTAQIFGDISTPA WVALSYV+SAVRLML+DFPGLR +GSLKCPQH + ML NK + G KLLE S CP+CS DT GLGAAAIDLV VDIR DRDVIF +VK RF +LESQYSF+ S +ED LI+K+ + ++ G+++LKG L
Sbjct: 694 AFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKMTQAGVKLLEPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELESQYSFSSSAASSNDEDVLIQKMEEVAR----TLKDGLDDLKGRL 909
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 293 bits (751), Expect = 1.840e-88 Identity = 154/198 (77.78%), Postives = 164/198 (82.83%), Query Frame = 1
Query: 1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKI 594
AFS SW+IFLGVPPGAIEKVLTRCCGLG V+TFWRYGVLVHGGLG D R FA+V+EYSS DNELTAQIFGDISTPA WVALSYVMSAV LMLVDFPGLR KG LKCPQH NEM F NK + GDK LE +CP+CS +T GLGAAAIDLV VDIR DRDVIF EVKARF LESQY F+ PT SK EDEL+RKI
Sbjct: 864 AFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVVEYSSTDNELTAQIFGDISTPAPWVALSYVMSAVSLMLVDFPGLRWKGCLKCPQHGNEMPFANKVNRAGDKFLE-RKCPRCSPETRGLGAAAIDLVCLVDIRLDRDVIFREVKARFVVLESQY-FSCPTGSSKTEDELLRKI 1059
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI) HSP 1 Score: 293 bits (751), Expect = 4.390e-88 Identity = 151/224 (67.41%), Postives = 171/224 (76.34%), Query Frame = 1
Query: 1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKISR---AVKGGFAEVEGGINNLKGELK 663
AF+ +WKIFLGVPPGAIEKVLTRCC LGGV+ FWR GVLVHGGLG +D FA VLEYSS +N LTAQIFGD S A WVALSYVMSAV LML+DFPGLR +GSLKCPQH + +L NK + GDK L GSRC +CS DT LGAAAIDLVR V++R DRDVIF EVK RF +LE QY F P SKEED LIRKI+ AV GGFAE + G+ +KGE++
Sbjct: 1030 AFNATWKIFLGVPPGAIEKVLTRCCSLGGVQIFWRNGVLVHGGLGDEDGYGIFAAVLEYSSAENGLTAQIFGDTSFSAAWVALSYVMSAVSLMLLDFPGLRWRGSLKCPQHGDTILLTNKVTRAGDKFLAGSRCQQCSADTRALGAAAIDLVRMVNVRLDRDVIFREVKERFVELEGQYVFPSPVGSSKEEDLLIRKINEVTIAVNGGFAETKAGLGEVKGEIE 1253
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 289 bits (739), Expect = 5.580e-87 Identity = 148/219 (67.58%), Postives = 172/219 (78.54%), Query Frame = 1
Query: 1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRK---ISRAVKGGFAEVEGGINNL 648
A SWKIFLGVP GAIEKVLTRCC LGGV+TFWR GVLVHGG+G QD FA+VLEYS +DNELTAQIFGDISTPA WVALSYV+SAV LML+DFPGLR +GSLKCPQH + M N + GDK+LEGSRC +CS DT GLGAAAIDLVR VDIR DRDVIF EVKARF DLE QYSF+ T S +E L++K ++R +K GF +++G ++ +
Sbjct: 794 ALRASWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGVGEQDRSGIFAVVLEYSPSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGDAMPLANMVTRTGDKILEGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLEGQYSFSSSTASSNDEGVLVQKMEEVARTLKDGFDDLKGRLSKV 1012
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 275 bits (704), Expect = 7.630e-83 Identity = 145/198 (73.23%), Postives = 156/198 (78.79%), Query Frame = 1
Query: 1 AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERRTFALVLEYSSNDNELTAQIFGDISTPAVWVALSYVMSAVRLMLVDFPGLRCKGSLKCPQHDNEMLFNNKASSGGDKLLEGSRCPKCSVDTGGLGAAAIDLVRFVDIRQDRDVIFTEVKARFDDLESQYSFTRPTDPSKEEDELIRKI 594
AFS SW+IFLGVPPGAIEKVLTRCCGLG V+TFWRYGVLVHGGLG D R FA+V EYSS +NELTAQIFGDIST A WVALSYV SAV LML+DFPGLR GSLKCPQH EM F K + GDK LE RCP+CS T GLGAAAIDL+R VDIR DR VI EVKARFD LESQY FT P S +EDE +RK+
Sbjct: 580 AFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKVNCAGDKFLE-RRCPRCSPQTRGLGAAAIDLIRMVDIRLDRGVIDREVKARFDVLESQY-FTCPAGSSTDEDEFVRKM 775 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12603.1997.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12603.1997.1 >prot_E-fasciculatus_F_contig12603.1997.1 ID=prot_E-fasciculatus_F_contig12603.1997.1|Name=mRNA_E-fasciculatus_F_contig12603.1997.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=226bp AFSVSWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGVQDERback to top mRNA from alignment at E-fasciculatus_F_contig12603:483..3941- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12603.1997.1 ID=mRNA_E-fasciculatus_F_contig12603.1997.1|Name=mRNA_E-fasciculatus_F_contig12603.1997.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3459bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12603:483..3941- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12603:483..3941- >mRNA_E-fasciculatus_F_contig12603.1997.1 ID=mRNA_E-fasciculatus_F_contig12603.1997.1|Name=mRNA_E-fasciculatus_F_contig12603.1997.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1356bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12603:483..3941- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |