mRNA_E-fasciculatus_F_contig12515.1933.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12515.1933.1 vs. uniprot
Match: D7G7H8_ECTSI (Transmembrane 9 superfamily member n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7H8_ECTSI) HSP 1 Score: 449 bits (1155), Expect = 2.460e-153 Identity = 224/230 (97.39%), Postives = 229/230 (99.57%), Query Frame = 1
Query: 1 QMTLLTAFSFPALAGSVFVLEGVQQWFIGSTGAVPFRILVLLMAMLLFVQTPLVFLGSFYGFKKEQPPQVVRTNQIPRMIPQTPWYVDPKVAVPFAGVLPFGAVLVELVFVMTAMWEQQLYYIFGFLMSVMLILTVTCAEISIVMCYFQLCSEDYRWWWRSLLWSGSCAGWMFIYSVGYYFTVLHMSGWMAASLFFGYTFVMTACFFLLTGTVGYFSCQWFINVIYSSIK 690
+MTLLTAFSFPALAGSVFVLEG+QQWFIGSTGAVP RILVLL+AMLLFVQTPLVFLGSFYGFKKEQPPQVVRTNQIPRMIPQTPWYVDPKVAVPFAGVLPFGAVLVELVFVMTAMWEQQLYYIFGFLMSVMLILTVTCAEISIVMCYFQLCSEDYRWWWRSLLWSGSCAGWMFIYSVGYYFTVL+MSGWMAASLFFGYTFVMT+CFFLLTGTVGYFSCQWFINVIYSSIK
Sbjct: 415 KMTLLTAFSFPALAGSVFVLEGIQQWFIGSTGAVPVRILVLLVAMLLFVQTPLVFLGSFYGFKKEQPPQVVRTNQIPRMIPQTPWYVDPKVAVPFAGVLPFGAVLVELVFVMTAMWEQQLYYIFGFLMSVMLILTVTCAEISIVMCYFQLCSEDYRWWWRSLLWSGSCAGWMFIYSVGYYFTVLNMSGWMAASLFFGYTFVMTSCFFLLTGTVGYFSCQWFINVIYSSIK 644
BLAST of mRNA_E-fasciculatus_F_contig12515.1933.1 vs. uniprot
Match: A0A835Z917_9STRA (Transmembrane 9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z917_9STRA) HSP 1 Score: 281 bits (720), Expect = 2.020e-88 Identity = 138/230 (60.00%), Postives = 177/230 (76.96%), Query Frame = 1
Query: 1 QMTLLTAFSFPALAGSVFVLEGVQQWFIGSTGAVPFRILVLLMAMLLFVQTPLVFLGSFYGFKKEQPPQVVRTNQIPRMIPQTPWYVDPKVAVPFAGVLPFGAVLVELVFVMTAMWEQQLYYIFGFLMSVMLILTVTCAEISIVMCYFQLCSEDYRWWWRSLLWSGSCAGWMFIYSVGYYFTVLHMSGWMAASLFFGYTFVMTACFFLLTGTVGYFSCQWFINVIYSSIK 690
++TLL A +PA+ ++F L +GST AV F L +M + L VQ PLVF+GS+YGFKKE P Q VRTNQIPR +P PW++ P VA+PF G+LPFGAV VEL F++TA+W QQLYYIFGFL+ VM+IL +TCAEISIV+CYFQLC+ED+RWWWRS+ W+GSCAG+MF+YS+ YY L MSG++ A ++FGY+ ++ F L+TGT+GYFSC WFI IYSSIK
Sbjct: 373 KVTLLAATLYPAVCFAIFFLINFALRMVGSTAAVSFSALATIMLLWLTVQAPLVFIGSYYGFKKELPEQPVRTNQIPRQVPPQPWFLHPAVALPFGGILPFGAVSVELYFILTAVWLQQLYYIFGFLLLVMVILVLTCAEISIVLCYFQLCAEDHRWWWRSVQWAGSCAGYMFLYSMWYYLQDLQMSGFVPALMYFGYSALLAVSFALVTGTIGYFSCLWFITRIYSSIK 602
BLAST of mRNA_E-fasciculatus_F_contig12515.1933.1 vs. uniprot
Match: A0A8J2WZ90_9STRA (Transmembrane 9 superfamily member n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ90_9STRA) HSP 1 Score: 246 bits (628), Expect = 1.860e-74 Identity = 118/228 (51.75%), Postives = 167/228 (73.25%), Query Frame = 1
Query: 7 TLLTAFSFPALAGSVFVLEGVQQWFIGSTGAVPFRILVLLMAMLLFVQTPLVFLGSFYGFKKEQPPQVVRTNQIPRMIPQTPWYVDPKVAVPFAGVLPFGAVLVELVFVMTAMWEQQLYYIFGFLMSVMLILTVTCAEISIVMCYFQLCSEDYRWWWRSLLWSGSCAGWMFIYSVGYYFTVLHMSGWMAASLFFGYTFVMTACFFLLTGTVGYFSCQWFINVIYSSIK 690
TLLTA P + F++ + +GS+GAVP L+ L+ + V PLVFLG++ GFKK+ P VRTNQIPR++P PWY+ P + F G+LPFGAV VEL FVM+A+W Q+YYIFGFL V +IL TCAEI+I++CYFQLC+EDY WWWRS++ SG+CAG++F+Y+V Y+ + L ++G + ++L+FGY +++ FFL+TGT+G+++C WF+N IY SIK
Sbjct: 406 TLLTATLVPGFTFACFLVIDISLLSVGSSGAVPVSTLLTLVVLWFGVSVPLVFLGAYVGFKKDVAPNPVRTNQIPRLVPPQPWYMHPALTTIFGGILPFGAVSVELFFVMSAIWLHQIYYIFGFLFLVSMILVATCAEITILLCYFQLCNEDYAWWWRSVMSSGACAGYVFLYAVWYFISELEITGGVPSTLYFGYMTLVSGIFFLVTGTIGFYACLWFVNKIYGSIK 633
BLAST of mRNA_E-fasciculatus_F_contig12515.1933.1 vs. uniprot
Match: A0A8K0MU26_COCNU (Putative Transmembrane 9 superfamily member 8 n=1 Tax=Cocos nucifera TaxID=13894 RepID=A0A8K0MU26_COCNU) HSP 1 Score: 236 bits (601), Expect = 2.280e-74 Identity = 116/230 (50.43%), Postives = 165/230 (71.74%), Query Frame = 1
Query: 1 QMTLLTAFSFPALAGSVFVLEGVQQWFIGSTGAVPFRILVLLMAMLLFVQTPLVFLGSFYGFKKEQPPQVVRTNQIPRMIPQTPWYVDPKVAVPFAGVLPFGAVLVELVFVMTAMWEQQLYYIFGFLMSVMLILTVTCAEISIVMCYFQLCSEDYRWWWRSLLWSGSCAGWMFIYSVGYYFTVLHMSGWMAASLFFGYTFVMTACFFLLTGTVGYFSCQWFINVIYSSIK 690
++TL TAF FPA+ ++F + W S+GAVPF + L+ + + PLVFLGS+ GFK+ V+TN+IPR IP+ WY++P +++ G+LPFGAV +EL F++T++W QQ YYIFGFL V LIL VTC EI+IV+CYFQLCSEDY WWWRS L +GS A ++F+YS+ Y+ T L ++ +A L+FGY F+ + FF+LTGT+G+++C WF+ +IYSS+K
Sbjct: 55 KITLSTAFMFPAVVFAIFFVLNSIIWGEKSSGAVPFTTMFALVLLWFGISVPLVFLGSYIGFKQSATEDPVKTNKIPRQIPEQAWYMNPILSILVGGILPFGAVFIELFFILTSIWLQQFYYIFGFLFLVFLILVVTCVEITIVLCYFQLCSEDYLWWWRSYLTAGSSALYLFLYSIFYFVTKLEITKLGSAILYFGYMFIASYSFFVLTGTIGFYACFWFMRLIYSSVK 284
BLAST of mRNA_E-fasciculatus_F_contig12515.1933.1 vs. uniprot
Match: F0Y3U4_AURAN (Transmembrane 9 superfamily member n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3U4_AURAN) HSP 1 Score: 244 bits (623), Expect = 1.170e-73 Identity = 117/228 (51.32%), Postives = 165/228 (72.37%), Query Frame = 1
Query: 7 TLLTAFSFPALAGSVFVLEGVQQWFIGSTGAVPFRILVLLMAMLLFVQTPLVFLGSFYGFKKEQPPQVVRTNQIPRMIPQTPWYVDPKVAVPFAGVLPFGAVLVELVFVMTAMWEQQLYYIFGFLMSVMLILTVTCAEISIVMCYFQLCSEDYRWWWRSLLWSGSCAGWMFIYSVGYYFTVLHMSGWMAASLFFGYTFVMTACFFLLTGTVGYFSCQWFINVIYSSIK 690
TLLTA +FP F++ + +GS+GAVP L+ L+ + V PLVF G++ GFKK+ P VRTNQIPR++P PWY++ + F G+LPFGAV VEL F+M+A+W Q+YYIFGFL VM+IL TCAEI+I++CYFQLC+EDY WWWRS+L SG+CAG++ +Y+V YY L ++G + ++L+FGY +++ FFL+TG +G+++C WF+N IY SIK
Sbjct: 413 TLLTALAFPGFVFGAFLVIDMSLLAVGSSGAVPLTTLLTLVVLWFGVSVPLVFGGAYCGFKKDVEPHPVRTNQIPRLVPPQPWYMNAALTTTFGGILPFGAVSVELFFIMSAIWLHQIYYIFGFLFLVMIILVATCAEITILLCYFQLCNEDYNWWWRSVLSSGACAGYVLLYAVWYYVFELEITGVVPSTLYFGYMILISLSFFLITGAIGFYACFWFVNKIYGSIK 640
BLAST of mRNA_E-fasciculatus_F_contig12515.1933.1 vs. uniprot
Match: A0A7S4BHG5_CHRCT (Transmembrane 9 superfamily member n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BHG5_CHRCT) HSP 1 Score: 232 bits (592), Expect = 1.970e-73 Identity = 110/221 (49.77%), Postives = 159/221 (71.95%), Query Frame = 1
Query: 28 FPALAGSVFVLEGVQQWFIGSTGAVPFRILVLLMAMLLFVQTPLVFLGSFYGFKKEQPPQVVRTNQIPRMIPQTPWYVDPKVAVPFAGVLPFGAVLVELVFVMTAMWEQQLYYIFGFLMSVMLILTVTCAEISIVMCYFQLCSEDYRWWWRSLLWSGSCAGWMFIYSVGYYFTVLHMSGWMAASLFFGYTFVMTACFFLLTGTVGYFSCQWFINVIYSSIK 690
FP + ++F + W S+GAVPF L L+ + + PLVFLG+++G++++ VR NQIPR +P+ WY+ P +V GVLPFGAV +EL F+++++W Q YY+FGFL+ V +IL +TCAEI++VMCYFQLC+EDY WWWR+ L SGS AG+MF YSV Y+FT L ++ +++A L+FGY F+ T FFLLTGT+G+++C WF+ I+S+IK
Sbjct: 33 FPGIVFTIFFVLNFFVWGEKSSGAVPFGTLCALLVLWFGISMPLVFLGAYFGYRRKPLDLPVRVNQIPRQVPEQVWYMQPAFSVTVGGVLPFGAVFIELFFILSSIWLHQFYYVFGFLLLVFIILIITCAEITMVMCYFQLCAEDYHWWWRAFLTSGSSAGYMFAYSVFYFFTKLEITKFVSALLYFGYMFIATIVFFLLTGTIGFYACYWFVWKIFSAIK 253
BLAST of mRNA_E-fasciculatus_F_contig12515.1933.1 vs. uniprot
Match: A0A7S4F1H2_CHRCT (Transmembrane 9 superfamily member n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F1H2_CHRCT) HSP 1 Score: 234 bits (598), Expect = 2.080e-73 Identity = 112/227 (49.34%), Postives = 163/227 (71.81%), Query Frame = 1
Query: 10 LLTAFSFPALAGSVFVLEGVQQWFIGSTGAVPFRILVLLMAMLLFVQTPLVFLGSFYGFKKEQPPQVVRTNQIPRMIPQTPWYVDPKVAVPFAGVLPFGAVLVELVFVMTAMWEQQLYYIFGFLMSVMLILTVTCAEISIVMCYFQLCSEDYRWWWRSLLWSGSCAGWMFIYSVGYYFTVLHMSGWMAASLFFGYTFVMTACFFLLTGTVGYFSCQWFINVIYSSIK 690
+LT+ FP + ++F + W S+GAVPF L L+ + + PLVFLG+++G++++ VR NQIPR +P+ WY+ P +V GVLPFGAV +EL F+++++W Q YY+FGFL+ V +IL +TCAEI++VMCYFQLC+EDY WWWR+ L SGS AG+MF YSV Y+FT L ++ +++A L+FGY F+ T FFLLTGT+G+++C WF+ I+S+IK
Sbjct: 96 ILTSCLFPGIVFTIFFVLNFFVWGEKSSGAVPFGTLCALLVLWFGISMPLVFLGAYFGYRRKPLDLPVRVNQIPRQVPEQVWYMQPAFSVTVGGVLPFGAVFIELFFILSSIWLHQFYYVFGFLLLVFIILIITCAEITMVMCYFQLCAEDYHWWWRAFLTSGSSAGYMFAYSVFYFFTKLEITKFVSALLYFGYMFIATIVFFLLTGTIGFYACYWFVWKIFSAIK 322
BLAST of mRNA_E-fasciculatus_F_contig12515.1933.1 vs. uniprot
Match: A0A427AD14_ENSVE (Transmembrane 9 superfamily member n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A427AD14_ENSVE) HSP 1 Score: 236 bits (601), Expect = 2.840e-73 Identity = 115/230 (50.00%), Postives = 162/230 (70.43%), Query Frame = 1
Query: 1 QMTLLTAFSFPALAGSVFVLEGVQQWFIGSTGAVPFRILVLLMAMLLFVQTPLVFLGSFYGFKKEQPPQVVRTNQIPRMIPQTPWYVDPKVAVPFAGVLPFGAVLVELVFVMTAMWEQQLYYIFGFLMSVMLILTVTCAEISIVMCYFQLCSEDYRWWWRSLLWSGSCAGWMFIYSVGYYFTVLHMSGWMAASLFFGYTFVMTACFFLLTGTVGYFSCQWFINVIYSSIK 690
++TL TAF+FP + ++F + W S+GAVPF + L+ + + PLVF+GS+ GFKK P V+TN+IPR IP+ WY++P ++ G+LPFGAV +EL F++T++W Q YYIFGFL V LIL VTCAEI+IV+CYFQLCSEDY WWWRS L SGS A ++F+Y+ Y+FT L ++ ++ L+FGY + + FF+LTGT+G+ +C WF +IYSS+K
Sbjct: 139 KITLKTAFTFPGIVFAIFFVLNALIWGEKSSGAVPFTTMFALVLLWFGISVPLVFVGSYLGFKKPAPEDPVKTNKIPRQIPEQAWYMNPVFSILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFLVFLILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSGLLYFGYMLIASYAFFVLTGTIGFCACFWFTRLIYSSVK 368
BLAST of mRNA_E-fasciculatus_F_contig12515.1933.1 vs. uniprot
Match: A0A7S2WV93_9STRA (Transmembrane 9 superfamily member n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV93_9STRA) HSP 1 Score: 242 bits (617), Expect = 1.030e-72 Identity = 123/228 (53.95%), Postives = 161/228 (70.61%), Query Frame = 1
Query: 7 TLLTAFSFPALAGSVFVLEGVQQWFIGSTGAVPFRILVLLMAMLLFVQTPLVFLGSFYGFKKEQPPQVVRTNQIPRMIPQTPWYVDPKVAVPFAGVLPFGAVLVELVFVMTAMWEQQLYYIFGFLMSVMLILTVTCAEISIVMCYFQLCSEDYRWWWRSLLWSGSCAGWMFIYSVGYYFTVLHMSGWMAASLFFGYTFVMTACFFLLTGTVGYFSCQWFINVIYSSIK 690
T+ TA FP L +FV V F GS+GA+P L+ + V TPLVF+GS++G+KKE VR N IPR IP PW+++P V + F G+LPFGAV VEL FVM+A+W Q+YYIFGFL VM+IL TCAE +I+MCYFQLC+ED+RWWWRS+L SGSC+ ++F+Y+V Y+FT L + G + A L+FGY +++ FFLLTG +GY SC WF+ IY SIK
Sbjct: 420 TVATALLFPGLLAFIFVALDVLLMFEGSSGAIPLSTFCTLVVLWFGVSTPLVFVGSYFGYKKEAYTPPVRVNLIPRQIPPQPWFMNPLVTIFFGGILPFGAVSVELFFVMSALWLHQIYYIFGFLFLVMMILVATCAETTILMCYFQLCNEDHRWWWRSVLSSGSCSIYVFLYAVWYFFTELEIEGVVPALLYFGYMAMISIGFFLLTGAIGYLSCFWFVAKIYGSIK 647
BLAST of mRNA_E-fasciculatus_F_contig12515.1933.1 vs. uniprot
Match: A0A7S3BJU6_9EUKA (Transmembrane 9 superfamily member n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BJU6_9EUKA) HSP 1 Score: 241 bits (614), Expect = 2.390e-72 Identity = 117/230 (50.87%), Postives = 159/230 (69.13%), Query Frame = 1
Query: 1 QMTLLTAFSFPALAGSVFVLEGVQQWFIGSTGAVPFRILVLLMAMLLFVQTPLVFLGSFYGFKKEQPPQVVRTNQIPRMIPQTPWYVDPKVAVPFAGVLPFGAVLVELVFVMTAMWEQQLYYIFGFLMSVMLILTVTCAEISIVMCYFQLCSEDYRWWWRSLLWSGSCAGWMFIYSVGYYFTVLHMSGWMAASLFFGYTFVMTACFFLLTGTVGYFSCQWFINVIYSSIK 690
QMTLLT F +P + + F + W GS+GA+PF +V L+ M + PLVFLG+F+GFK + RTN+IPR IP+ WY+ V G+LPFGA+ +EL F+MT++W Q+ YY+FGFL V+LILT+TCAEISIV+CYFQLC+EDY WWWRS L SGS ++F YS+ Y+FT L + G++ ++F Y V FFL+TGT+G++SC WF+ IYS+IK
Sbjct: 409 QMTLLTGFLYPTIIATTFFVLNFFIWSQGSSGAIPFGTMVALLLMWFCISVPLVFLGAFFGFKAKLKDPPTRTNEIPRQIPEQAWYMGGTFNVLMGGILPFGAIFIELFFIMTSVWLQRFYYVFGFLALVLLILTITCAEISIVLCYFQLCNEDYNWWWRSFLTSGSSGLYLFAYSIMYFFTQLEILGFVPTLIYFTYMVVFAVLFFLVTGTIGFYSCYWFVWTIYSAIK 638 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12515.1933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12515.1933.1 >prot_E-fasciculatus_F_contig12515.1933.1 ID=prot_E-fasciculatus_F_contig12515.1933.1|Name=mRNA_E-fasciculatus_F_contig12515.1933.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=229bp MTLLTAFSFPALAGSVFVLEGVQQWFIGSTGAVPFRILVLLMAMLLFVQTback to top mRNA from alignment at E-fasciculatus_F_contig12515:1114..3966- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12515.1933.1 ID=mRNA_E-fasciculatus_F_contig12515.1933.1|Name=mRNA_E-fasciculatus_F_contig12515.1933.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2853bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12515:1114..3966- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12515:1114..3966- >mRNA_E-fasciculatus_F_contig12515.1933.1 ID=mRNA_E-fasciculatus_F_contig12515.1933.1|Name=mRNA_E-fasciculatus_F_contig12515.1933.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1374bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12515:1114..3966- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |