prot_E-fasciculatus_F_contig12491.1917.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12491.1917.1
Unique Nameprot_E-fasciculatus_F_contig12491.1917.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length468
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12491.1917.1 vs. uniprot
Match: D8LGY8_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY8_ECTSI)

HSP 1 Score: 508 bits (1308), Expect = 3.990e-163
Identity = 357/464 (76.94%), Postives = 367/464 (79.09%), Query Frame = 0 
Query:   15 MPVLESAVGSEASLSLPRAVETCDDQAGQEEEKIRQRQSHEQRNEGGASLQDVKRALRNNFHATGVIDDVTARLRRQFVLELRRKGLGVPGAQEAAVAAGSSRRRRSPSGISLQERVFHSLVVDHLASNGLLQSLAVFLPESGLGGGXXXXXXXXXXXXXXXXXPAAEAALSREDLLQALPIPADSALFRRVIRRAEEGEGKDAGPVRCCSDGETAAGPGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDSRQQKRVCGLLEALVGEVATRSRAVAVDSNTQTDEAGRSHKENLVSRLEAVRETWLRRSADERREPAQDVTERMLAYQRECESRAAAQ----------IKAERDSFRERDLAXXXXXXXXXXXXXXXXXXXXXXSQYDGRVERLQETERDREXXXXXXXXXXXXXXXXXXXXXXXEMDLLRTREQEIRRSAELDSRGV 468
            MPVLESAV SE S +LPR VET D+QA QEE+KIRQ    +Q NEGGASL DVKRALR+NF ATGVIDDVTARLRRQFVLELRRKGLGVPGAQEAAVAAG+ RRRRSPSGISLQERV HSLVVDHLASNGLLQSLAVFLPESGLGGG                 PAAEAALSRED+LQALPIPADS LFRRVIRRAEEGEGK AG V C SDGETAA PGA                XXXXXXXXXXXXXXXXXXXX         SR+QKRVCGLLEALVGEVATRSRAVAVDSNTQTDEAGRSHKENLV+RLEAVRETWLRRSADERREPAQDVTERMLAYQRECESRAAAQ          IKAERDSFRERDLA                      SQYD RVERLQETERDREXXXXXXXXXXXXXXXXXXXXXXX MDLLRTREQE+RRSAELDSRGV
Sbjct:    1 MPVLESAVESEVSFALPRVVETRDEQAEQEEQKIRQESHEQQPNEGGASLHDVKRALRDNFRATGVIDDVTARLRRQFVLELRRKGLGVPGAQEAAVAAGTCRRRRSPSGISLQERVLHSLVVDHLASNGLLQSLAVFLPESGLGGGSNCGNTATVGTGPGAA-PAAEAALSREDVLQALPIPADSNLFRRVIRRAEEGEGKAAGSV-CRSDGETAAVPGAAAGADTAVVSNASVAVXXXXXXXXXXXXXXXXXXXX---------SREQKRVCGLLEALVGEVATRSRAVAVDSNTQTDEAGRSHKENLVTRLEAVRETWLRRSADERREPAQDVTERMLAYQRECESRAAAQASCWVAPRLLIKAERDSFRERDLAALRVQMASTRRREVDAMRKELQSQYDARVERLQETERDREXXXXXXXXXXXXXXXXXXXXXXXXMDLLRTREQEVRRSAELDSRGV 453
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BLAST of mRNA_E-fasciculatus_F_contig12491.1917.1 vs. uniprot
Match: A0A835Z6Y0_9STRA (LisH domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Y0_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 4.350e-13
Identity = 48/95 (50.53%), Postives = 60/95 (63.16%), Query Frame = 0 
Query:   63 SLQDVKRALRNNFHATGVIDDVTARLRRQFVLELRRKGLGVPGAQEAAVAAGSSRRRRSPSGISLQERVFHSLVVDHLASNGLLQSLAVFLPESG 157
            SL +++  LR +F  TGV+ D+TARLRRQFV EL +   G P A +A VA       R  S + L +R   +LV D L + GLLQSLAVFLPESG
Sbjct:   18 SLHELRDRLRTSFRETGVLADITARLRRQFVAELVQHHHGPP-AMKALVA------NRQISELPLTQRQLRNLVADFLRAQGLLQSLAVFLPESG 105
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BLAST of mRNA_E-fasciculatus_F_contig12491.1917.1 vs. uniprot
Match: G5A2S0_PHYSP (LisH domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A2S0_PHYSP)

HSP 1 Score: 52.8 bits (125), Expect = 8.260e-5
Identity = 34/98 (34.69%), Postives = 54/98 (55.10%), Query Frame = 0 
Query:   63 SLQDVKRALRNNFHATGVIDDVTARLRRQFVLEL---RRKGLGVPGAQEAAVAAGSSRRRRSPSGISLQERVFHSLVVDHLASNGLLQSLAVFLPESG 157
            SL+++K  +  +    G ++ + A+LRR+F+ +L   RR      G   A      SR  RS   ++  E++ H LV ++LAS GL  +LAVF+PE G
Sbjct:   21 SLEELKEGMFQSIRDNGTVELIRAQLRRRFIEKLQQQRRLRDDQDGENNA------SRANRSTQSLTPDEKLVHGLVAEYLASKGLENTLAVFVPEIG 112
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12491.1917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LGY8_ECTSI3.990e-16376.94LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835Z6Y0_9STRA4.350e-1350.53LisH domain-containing protein (Fragment) n=1 Tax=... [more]
G5A2S0_PHYSP8.260e-534.69LisH domain-containing protein n=1 Tax=Phytophthor... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 400..420
NoneNo IPR availableCOILSCoilCoilcoord: 440..460
NoneNo IPR availablePANTHERPTHR39063FAMILY NOT NAMEDcoord: 56..158
coord: 290..467
IPR006594LIS1 homology motifPFAMPF16045LisH_2coord: 133..159
e-value: 2.0E-10
score: 39.5
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 128..160
score: 8.679

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12491contigE-fasciculatus_F_contig12491:82..3996 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12491.1917.1mRNA_E-fasciculatus_F_contig12491.1917.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12491 82..3996 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12491.1917.1 ID=prot_E-fasciculatus_F_contig12491.1917.1|Name=mRNA_E-fasciculatus_F_contig12491.1917.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=468bp
VLVGSSTRQLYATPMPVLESAVGSEASLSLPRAVETCDDQAGQEEEKIRQ
RQSHEQRNEGGASLQDVKRALRNNFHATGVIDDVTARLRRQFVLELRRKG
LGVPGAQEAAVAAGSSRRRRSPSGISLQERVFHSLVVDHLASNGLLQSLA
VFLPESGLGGGSSSSSSTATAGTGSGAAPAAEAALSREDLLQALPIPADS
ALFRRVIRRAEEGEGKDAGPVRCCSDGETAAGPGAAAAAAADAAVVLNPS
AAVLNQSAAAAGSGGHVRAASSGGGGGGRDSRQQKRVCGLLEALVGEVAT
RSRAVAVDSNTQTDEAGRSHKENLVSRLEAVRETWLRRSADERREPAQDV
TERMLAYQRECESRAAAQIKAERDSFRERDLAALRVQMASTRRREVDAMR
KELQSQYDGRVERLQETERDRERRHNDRLREAEVSQFDARQNLLREMDLL
RTREQEIRRSAELDSRGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006594LisH